Result of FASTA (ccds) for
pFN21AB5673
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5673, 550 aa
1>>>pF1KB5673 550 - 550 aa - 550 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4459+/- 0.001; mu= 17.8842+/- 0.060
mean_var=66.7565+/-13.945, 0's: 0 Z-trim(103.7): 35 B-trim: 0 in 0/49
Lambda= 0.156974
statistics sampled from 7520 (7537) to 7520 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.232), width: 16
Scan time: 3.170
The best scores are: opt bits E(32554)
CCDS1330.1 SOAT1 gene_id:6646|Hs108|chr1 ( 550) 3753 859.2 0
CCDS58047.1 SOAT1 gene_id:6646|Hs108|chr1 ( 492) 3385 775.9 0
CCDS58048.1 SOAT1 gene_id:6646|Hs108|chr1 ( 485) 3342 766.1 0
CCDS8847.1 SOAT2 gene_id:8435|Hs108|chr12 ( 522) 1711 396.8 3.4e-110
CCDS6420.1 DGAT1 gene_id:8694|Hs108|chr8 ( 488) 405 101.0 3.4e-21
>>CCDS1330.1 SOAT1 gene_id:6646|Hs108|chr1 (550 aa)
initn: 3753 init1: 3753 opt: 3753 Z-score: 4590.8 bits: 859.2 E(32554): 0
Smith-Waterman score: 3753; 100.0% identity (100.0% similar) in 550 aa overlap (1-550:1-550)
10 20 30 40 50 60
pF1KB5 MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IFIARRSLLDELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSAR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTW
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFM
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVR
490 500 510 520 530 540
550
pF1KB5 PRSWTCRYVF
::::::::::
CCDS13 PRSWTCRYVF
550
>>CCDS58047.1 SOAT1 gene_id:6646|Hs108|chr1 (492 aa)
initn: 3385 init1: 3385 opt: 3385 Z-score: 4141.2 bits: 775.9 E(32554): 0
Smith-Waterman score: 3385; 100.0% identity (100.0% similar) in 491 aa overlap (60-550:2-492)
30 40 50 60 70 80
pF1KB5 AKESLETPSNGRIDIKQLIAKKIKLTAEAEELKPFFMKEVGSHFDDFVTNLIEKSASLDN
::::::::::::::::::::::::::::::
CCDS58 MELKPFFMKEVGSHFDDFVTNLIEKSASLDN
10 20 30
90 100 110 120 130 140
pF1KB5 GGCALTTFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GGCALTTFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB5 ILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATG
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB5 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHS
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB5 FVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQ
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 VFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWL
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 NAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAM
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB5 LAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFL
400 410 420 430 440 450
510 520 530 540 550
pF1KB5 GNGVLLCFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
:::::::::::::::::::::::::::::::::::::::::
CCDS58 GNGVLLCFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
460 470 480 490
>>CCDS58048.1 SOAT1 gene_id:6646|Hs108|chr1 (485 aa)
initn: 3342 init1: 3342 opt: 3342 Z-score: 4088.6 bits: 766.1 E(32554): 0
Smith-Waterman score: 3342; 100.0% identity (100.0% similar) in 485 aa overlap (66-550:1-485)
40 50 60 70 80 90
pF1KB5 TPSNGRIDIKQLIAKKIKLTAEAEELKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALT
::::::::::::::::::::::::::::::
CCDS58 MKEVGSHFDDFVTNLIEKSASLDNGGCALT
10 20 30
100 110 120 130 140 150
pF1KB5 TFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALLILFILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVDHIRTIYHMFIALLILFILS
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 TLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLFQHWATGYSKSSH
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB5 PLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRFVMKAHSFVRENV
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 PRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFF
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 YVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEM
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB5 LRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAV
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB5 SAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLMWTSLFLGNGVLL
400 410 420 430 440 450
520 530 540 550
pF1KB5 CFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
:::::::::::::::::::::::::::::::::::
CCDS58 CFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
460 470 480
>>CCDS8847.1 SOAT2 gene_id:8435|Hs108|chr12 (522 aa)
initn: 1748 init1: 1196 opt: 1711 Z-score: 2091.9 bits: 396.8 E(32554): 3.4e-110
Smith-Waterman score: 1711; 55.7% identity (80.1% similar) in 433 aa overlap (116-546:96-520)
90 100 110 120 130 140
pF1KB5 SLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGK--IFIARRSLLDELLEVDHIRTIYH
: :: .:: :.::::::.::.:.:::::
CCDS88 RAMREAIQSYPSQDKPLPPPPPGSLSRTQEPSLGKQKVFIIRKSLLDELMEVQHFRTIYH
70 80 90 100 110 120
150 160 170 180 190 200
pF1KB5 MFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTWWIMFLSTFSVPYFLF
:::: : .::.:::..:.::::::.:::.:: ..::..: .. :: :::::. .:: .
CCDS88 MFIAGLCVFIISTLAIDFIDEGRLLLEFDLLIFSFGQLPLALVTWVPMFLSTLLAPYQAL
130 140 150 160 170 180
210 220 230 240 250 260
pF1KB5 QHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLAYTLPPASRFIIIFEQIRF
. :: : .. : : .. . :: :..:.. . :::::: ...:::.::
CCDS88 RLWARGTWTQATGL------GCALLAAHAVVLCALPVHVAVEHQLPPASRCVLVFEQVRF
190 200 210 220 230
270 280 290 300 310 320
pF1KB5 VMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPTLIYRDSYPRNPTVRWGYV
.::..::.:: :: .: . ... . :. ..:::::: ::::::..:::.: :::.::
CCDS88 LMKSYSFLREAVPGTLRA--RRGEGIQAPSFSSYLYFLFCPTLIYRETYPRTPYVRWNYV
240 250 260 270 280 290
330 340 350 360 370 380
pF1KB5 AMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLCVFNSILPGVLILFLTFFA
: .:::..:: .:. .:. :::.:.: :...::::.:.::: .... :::...:.: :::
CCDS88 AKNFAQALGCVLYACFILGRLCVPVFANMSREPFSTRALVLSILHATLPGIFMLLLIFFA
300 310 320 330 340 350
390 400 410 420 430 440
pF1KB5 FLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKR
:::::::::::::::::::::.:::::::.:::::::::::::::: :.:.: : ... :
CCDS88 FLHCWLNAFAEMLRFGDRMFYRDWWNSTSFSNYYRTWNVVVHDWLYSYVYQDGLRLLGAR
360 370 380 390 400 410
450 460 470 480 490 500
pF1KB5 FKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMAFNFIVNDSRKKPIWNVLM
...:::.:: ::::.::: . :.:::::...::. .: .::...:.: : :::::
CCDS88 ARGVAMLGVFLVSAVAHEYIFCFVLGFFYPVMLILFLVIGGMLNFMMHDQRTGPAWNVLM
420 430 440 450 460 470
510 520 530 540 550
pF1KB5 WTSLFLGNGVLLCFYSQEWYARQHCPLKNPTFLDYVRPRSWTCRYVF
:: ::::.:. . .: ::::::.:::: . :: : ::::.:
CCDS88 WTMLFLGQGIQVSLYCQEWYARRHCPLPQATFWGLVTPRSWSCHT
480 490 500 510 520
>>CCDS6420.1 DGAT1 gene_id:8694|Hs108|chr8 (488 aa)
initn: 358 init1: 231 opt: 405 Z-score: 493.9 bits: 101.0 E(32554): 3.4e-21
Smith-Waterman score: 446; 26.6% identity (56.0% similar) in 448 aa overlap (110-523:53-477)
80 90 100 110 120 130
pF1KB5 LIEKSASLDNGGCALTTFSVLEGEKNNHRAKDLRAPPEQGKIFIARRSLLDELLEVD---
:: : .:. . . : : :. :
CCDS64 GPAAAEEEVRDAAAGPDVGAAGDAPAPAPNKDGDAGVGSGHWELRCHRLQDSLFSSDSGF
30 40 50 60 70 80
140 150 160 170 180 190
pF1KB5 -HIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVVWTW----WIM
. : : . ...::: .. . : : :: ....: : : : ..: ..
CCDS64 SNYRGILNWCVVMLILSNARLFLENLIKYGILVDPIQVVSL-FLKDP---YSWPAPCLVI
90 100 110 120 130
200 210 220 230 240
pF1KB5 FLSTFSVPYF-LFQHWATGYSKSSHPLIRSLFHGFLFMIFQIG-VLGFGPTYVVLAYTLP
..:.: : . .. :.: . :.:. . ... .: : . :.:. ..
CCDS64 AANVFAVAAFQVEKRLAVGALTEQA--------GLLLHVANLATILCFPAAVVLLVESIT
140 150 160 170 180 190
250 260 270 280 290
pF1KB5 PASRFI------IIFEQIRFVMKAHSFVRENVPRVLNSAKEKSS-----TVPIP---TVN
:.. .. :.: .. ..:. :. .. ...:. :: :: : :
CCDS64 PVGSLLALMAHTILFLKLFSYRDVNSWCRRARAKAASAGKKASSAAAPHTVSYPDNLTYR
200 210 220 230 240 250
300 310 320 330 340 350
pF1KB5 QYLYFLFAPTLIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYI--FERLCAPLFRNIK
. :::::::: :. ..::.: .: .. .. ... :: . ... .: ..: .
CCDS64 DLYYFLFAPTLCYELNFPRSPRIRKRFLLRRILEML--FFTQLQVGLIQQWMVPTIQN-S
260 270 280 290 300
360 370 380 390 400
pF1KB5 QEPFS----ARVLVLCVFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWN
..::. .:. . ... .:. :: .. :. ..: ::: ::...:::: ::.::::
CCDS64 MKPFKDMDYSRI-IERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREFYRDWWN
310 320 330 340 350 360
410 420 430 440 450 460
pF1KB5 STSYSNYYRTWNVVVHDWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLS
: : . ....::. :: : . :: .: :... : .:: .:: ::: ..: :
CCDS64 SESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKW--MARTGVFLASAFFHEYLVSVPLR
370 380 390 400 410 420
470 480 490 500 510 520
pF1KB5 FFYPVLFVLFMFFGMA----FNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYAR
.: :. : :: . ..:. . :. .: ::..:. . . .: ...:
CCDS64 -----MFRLWAFTGMMAQIPLAWFVGRFFQGNYGNAAVWLSLIIGQPIAVLMYVHDYYVL
430 440 450 460 470
530 540 550
pF1KB5 QHCPLKNPTFLDYVRPRSWTCRYVF
CCDS64 NYEAPAAEA
480
550 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:12:15 2016 done: Sat Nov 5 13:12:16 2016
Total Scan time: 3.170 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]