FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6108, 121 aa 1>>>pF1KE6108 121 - 121 aa - 121 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1049+/-0.000492; mu= 12.3412+/- 0.030 mean_var=65.7369+/-13.204, 0's: 0 Z-trim(115.9): 2 B-trim: 939 in 1/50 Lambda= 0.158187 statistics sampled from 16483 (16485) to 16483 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.837), E-opt: 0.2 (0.506), width: 16 Scan time: 1.370 The best scores are: opt bits E(32554) CCDS6266.2 NDUFAF6 gene_id:137682|Hs108|chr8 ( 333) 690 165.0 2.8e-41 >>CCDS6266.2 NDUFAF6 gene_id:137682|Hs108|chr8 (333 aa) initn: 690 init1: 690 opt: 690 Z-score: 854.5 bits: 165.0 E(32554): 2.8e-41 Smith-Waterman score: 690; 100.0% identity (100.0% similar) in 99 aa overlap (1-99:1-99) 10 20 30 40 50 60 pF1KE6 MAASAHGSVWGPLRLGIPGLCCRRPPLGLYARMRRLPGPEVSGRSVAAASGPGAWGTDHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 MAASAHGSVWGPLRLGIPGLCCRRPPLGLYARMRRLPGPEVSGRSVAAASGPGAWGTDHY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 CLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQAGLLLLLSCCTVCHWDLNTKH ::::::::::::::::::::::::::::::::::::::: CCDS62 CLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKT 70 80 90 100 110 120 pF1KE6 C CCDS62 VEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAEN 130 140 150 160 170 180 121 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:30:59 2016 done: Tue Nov 8 09:30:59 2016 Total Scan time: 1.370 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]