FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1372, 578 aa 1>>>pF1KE1372 578 - 578 aa - 578 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5945+/-0.000883; mu= 8.3905+/- 0.053 mean_var=134.6715+/-26.826, 0's: 0 Z-trim(110.6): 17 B-trim: 0 in 0/52 Lambda= 0.110519 statistics sampled from 11693 (11700) to 11693 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.721), E-opt: 0.2 (0.359), width: 16 Scan time: 3.980 The best scores are: opt bits E(32554) CCDS8388.1 IL10RA gene_id:3587|Hs108|chr11 ( 578) 3896 632.8 3.5e-181 >>CCDS8388.1 IL10RA gene_id:3587|Hs108|chr11 (578 aa) initn: 3896 init1: 3896 opt: 3896 Z-score: 3366.4 bits: 632.8 E(32554): 3.5e-181 Smith-Waterman score: 3896; 99.8% identity (99.8% similar) in 578 aa overlap (1-578:1-578) 10 20 30 40 50 60 pF1KE1 MLPCLVVLLAALLSLRLGSDAHGTELPSPPSVWFEAEFFHHILHWTPIPNQSESTCYEVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MLPCLVVLLAALLSLRLGSDAHGTELPSPPSVWFEAEFFHHILHWTPIPNQSESTCYEVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLRYGIESWNSISNCSQTLSYDLTAVTLDLYHSNGYRARVRAVDGSRHSNWTVTNTRFSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 LLRYGIESWNSISNCSQTLSYDLTAVTLDLYHSNGYRARVRAVDGSRHSNWTVTNTRFSV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 DEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPANDTYESIFSHFREYEIAIRKVPGNFTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 DEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPANDTYESIFSHFREYEIAIRKVPGNFTF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 THKKVKHENFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYFTVTNVIIFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 THKKVKHENFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYFTVTNVIIFF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 AFVLLLSGALAYCLALQLYVRRRKKLPSVLLFKKPSPFIFISQRPSPETQDTIHPLDEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 AFVLLLSGALAYCLALQLYVRRRKKLPSVLLFKKPSPFIFISQRPSPETQDTIHPLDEEA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 FLKVSPELKNLDLHGSTDSGFGSTKPSLQTEEPQFLLPDPHPQADRTLGNGEPPVLGDSC :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: CCDS83 FLKVSPELKNLDLHGSTDSGFGSTKPSLQTEEPQFLLPDPHPQADRTLGNREPPVLGDSC 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SSGSSNSTDSGICLQEPSLSPSTGPTWEQQVGSNSRGQDDSGIDLVQNSEGRAGDTQGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 SSGSSNSTDSGICLQEPSLSPSTGPTWEQQVGSNSRGQDDSGIDLVQNSEGRAGDTQGGS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 ALGHHSPPEPEVPGEEDPAAVAFQGYLRQTRCAEEKATKTGCLEEESPLTDGLGPKFGRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 ALGHHSPPEPEVPGEEDPAAVAFQGYLRQTRCAEEKATKTGCLEEESPLTDGLGPKFGRC 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 LVDEAGLHPPALAKGYLKQDPLEMTLASSGAPTGQWNQPTEEWSLLALSSCSDLGISDWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 LVDEAGLHPPALAKGYLKQDPLEMTLASSGAPTGQWNQPTEEWSLLALSSCSDLGISDWS 490 500 510 520 530 540 550 560 570 pF1KE1 FAHDLAPLGCVAAPGGLLGSFNSDLVTLPLISSLQSSE :::::::::::::::::::::::::::::::::::::: CCDS83 FAHDLAPLGCVAAPGGLLGSFNSDLVTLPLISSLQSSE 550 560 570 578 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:21:18 2016 done: Mon Nov 7 00:21:19 2016 Total Scan time: 3.980 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]