Result of FASTA (omim) for pFN21AE0955
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0955, 483 aa
  1>>>pF1KE0955 483 - 483 aa - 483 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.6265+/-0.000583; mu= -12.7936+/- 0.036
 mean_var=900.3660+/-195.656, 0's: 0 Z-trim(121.6): 750  B-trim: 0 in 0/58
 Lambda= 0.042743
 statistics sampled from 37413 (38357) to 37413 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.45), width:  16
 Scan time: 11.100

The best scores are:                                      opt bits E(85289)
NP_063937 (OMIM: 606784) glycogen synthase kinase- ( 483) 3250 216.2 1.6e-55
NP_001139628 (OMIM: 605004) glycogen synthase kina ( 420) 2082 144.1 7.3e-34
XP_006713674 (OMIM: 605004) PREDICTED: glycogen sy ( 387) 1983 137.9 4.8e-32
XP_006713673 (OMIM: 605004) PREDICTED: glycogen sy ( 400) 1676 119.0 2.4e-26
NP_002084 (OMIM: 605004) glycogen synthase kinase- ( 433) 1676 119.1 2.6e-26
NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 ( 298)  605 52.8 1.6e-06
NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 ( 305)  594 52.1 2.6e-06
NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 ( 346)  582 51.5 4.6e-06
NP_002737 (OMIM: 601795) mitogen-activated protein ( 379)  583 51.6 4.6e-06
NP_001035145 (OMIM: 601795) mitogen-activated prot ( 357)  582 51.5 4.7e-06
NP_001310218 (OMIM: 300203,300672) cyclin-dependen ( 960)  573 51.6 1.2e-05
NP_003150 (OMIM: 300203,300672) cyclin-dependent k (1030)  573 51.6 1.2e-05
NP_001032420 (OMIM: 300203,300672) cyclin-dependen (1030)  573 51.6 1.2e-05
NP_002736 (OMIM: 176948) mitogen-activated protein ( 360)  557 49.9 1.4e-05
NP_620407 (OMIM: 176948) mitogen-activated protein ( 360)  557 49.9 1.4e-05
XP_016865978 (OMIM: 612325,612651) PREDICTED: seri ( 632)  562 50.6 1.5e-05
XP_016865980 (OMIM: 612325,612651) PREDICTED: seri ( 632)  562 50.6 1.5e-05
XP_016865977 (OMIM: 612325,612651) PREDICTED: seri ( 632)  562 50.6 1.5e-05
XP_016865981 (OMIM: 612325,612651) PREDICTED: seri ( 632)  562 50.6 1.5e-05
XP_016865979 (OMIM: 612325,612651) PREDICTED: seri ( 632)  562 50.6 1.5e-05
NP_055735 (OMIM: 612325,612651) serine/threonine-p ( 632)  562 50.6 1.5e-05
NP_057597 (OMIM: 612325,612651) serine/threonine-p ( 632)  562 50.6 1.5e-05
XP_011512721 (OMIM: 612325,612651) PREDICTED: seri ( 639)  562 50.6 1.5e-05
XP_011512723 (OMIM: 612325,612651) PREDICTED: seri ( 639)  562 50.6 1.5e-05
XP_016865976 (OMIM: 612325,612651) PREDICTED: seri ( 639)  562 50.6 1.5e-05
XP_011512722 (OMIM: 612325,612651) PREDICTED: seri ( 639)  562 50.6 1.5e-05
XP_016865975 (OMIM: 612325,612651) PREDICTED: seri ( 639)  562 50.6 1.5e-05
XP_016865974 (OMIM: 612325,612651) PREDICTED: seri ( 639)  562 50.6 1.5e-05
NP_002742 (OMIM: 602898) mitogen-activated protein ( 364)  551 49.6 1.8e-05
NP_001034892 (OMIM: 610076) cyclin-dependent kinas ( 346)  550 49.5 1.8e-05
XP_016866355 (OMIM: 154235,614181) PREDICTED: seri ( 439)  553 49.8 1.8e-05
XP_016864300 (OMIM: 603442) PREDICTED: cyclin-depe ( 479)  553 49.9 1.9e-05
NP_003939 (OMIM: 603442) cyclin-dependent kinase-l ( 493)  553 49.9 1.9e-05
XP_016864299 (OMIM: 603442) PREDICTED: cyclin-depe ( 493)  553 49.9 1.9e-05
XP_006714469 (OMIM: 603442) PREDICTED: cyclin-depe ( 530)  553 50.0   2e-05
XP_016870050 (OMIM: 610076) PREDICTED: cyclin-depe ( 351)  547 49.3 2.1e-05
NP_001317653 (OMIM: 603442) cyclin-dependent kinas ( 570)  553 50.0 2.1e-05
XP_016864298 (OMIM: 603442) PREDICTED: cyclin-depe ( 570)  553 50.0 2.1e-05
NP_001229314 (OMIM: 154235,614181) serine/threonin ( 583)  553 50.0 2.1e-05
XP_011512924 (OMIM: 154235,614181) PREDICTED: seri ( 583)  553 50.0 2.1e-05
XP_016866353 (OMIM: 154235,614181) PREDICTED: seri ( 623)  553 50.1 2.2e-05
NP_005897 (OMIM: 154235,614181) serine/threonine-p ( 623)  553 50.1 2.2e-05
NP_002740 (OMIM: 602521) mitogen-activated protein ( 816)  556 50.4 2.2e-05
NP_620602 (OMIM: 602521) mitogen-activated protein ( 816)  556 50.4 2.2e-05
NP_620603 (OMIM: 602521) mitogen-activated protein ( 816)  556 50.4 2.2e-05
XP_016866352 (OMIM: 154235,614181) PREDICTED: seri ( 648)  553 50.1 2.2e-05
XP_011512922 (OMIM: 154235,614181) PREDICTED: seri ( 648)  553 50.1 2.2e-05
XP_011512921 (OMIM: 154235,614181) PREDICTED: seri ( 648)  553 50.1 2.2e-05
NP_001229886 (OMIM: 154235,614181) serine/threonin ( 648)  553 50.1 2.2e-05
NP_001777 (OMIM: 116940) cyclin-dependent kinase 1 ( 297)  540 48.8 2.5e-05


>>NP_063937 (OMIM: 606784) glycogen synthase kinase-3 al  (483 aa)
 initn: 3250 init1: 3250 opt: 3250  Z-score: 1117.6  bits: 216.2 E(85289): 1.6e-55
Smith-Waterman score: 3250; 100.0% identity (100.0% similar) in 483 aa overlap (1-483:1-483)

               10        20        30        40        50        60
pF1KE0 MSGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 MSGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPERSQEVAYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 GASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPERSQEVAYT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 DIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 DIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 SSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLAYIHSQGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 SSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLAYIHSQGV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 CHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 CHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 AHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 AHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 PLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_063 PLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLT
              430       440       450       460       470       480

          
pF1KE0 NSS
       :::
NP_063 NSS
          

>>NP_001139628 (OMIM: 605004) glycogen synthase kinase-3  (420 aa)
 initn: 2131 init1: 2065 opt: 2082  Z-score: 728.9  bits: 144.1 E(85289): 7.3e-34
Smith-Waterman score: 2082; 78.1% identity (90.8% similar) in 401 aa overlap (84-483:21-420)

            60        70        80        90       100       110   
pF1KE0 GAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPER
                                     ..:    :.  .:..:::::::: ::::.:
NP_001           MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR
                         10        20        30        40        50

           120       130       140       150       160       170   
pF1KE0 SQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
        :::.::: ::::::::::::::.: .. :::::::::::::::::::::::::::::::
NP_001 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
               60        70        80        90       100       110

           180       190       200       210       220       230   
pF1KE0 RLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLA
       :::::::::::::::.::::::.::::::::::::...:: :.:..:::.::::::::::
NP_001 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA
              120       130       140       150       160       170

           240       250       260       270       280       290   
pF1KE0 YIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
       :::: :.:::::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_001 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
              180       190       200       210       220       230

           300       310       320       330       340       350   
pF1KE0 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
              240       250       260       270       280       290

           360       370       380       390       400       410   
pF1KE0 FKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQL
       :::::::::::::::. ::::::::::: ::::::..::.::::::::::::::  ...:
NP_001 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL
              300       310       320       330       340       350

           420       430       440       450       460       470   
pF1KE0 PNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQST
       ::.:  : ::::.. ::: .: : .:::::: :  :...: : .. : ... :..  :..
NP_001 PNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAA-SDANTGDRGQTN
              360       370       380       390        400         

            480   
pF1KE0 DA-TPTLTNSS
       .: . . .::.
NP_001 NAASASASNST
     410       420

>>XP_006713674 (OMIM: 605004) PREDICTED: glycogen syntha  (387 aa)
 initn: 2034 init1: 1968 opt: 1983  Z-score: 696.3  bits: 137.9 E(85289): 4.8e-32
Smith-Waterman score: 1983; 85.1% identity (94.2% similar) in 343 aa overlap (84-426:21-363)

            60        70        80        90       100       110   
pF1KE0 GAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPER
                                     ..:    :.  .:..:::::::: ::::.:
XP_006           MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR
                         10        20        30        40        50

           120       130       140       150       160       170   
pF1KE0 SQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
        :::.::: ::::::::::::::.: .. :::::::::::::::::::::::::::::::
XP_006 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
               60        70        80        90       100       110

           180       190       200       210       220       230   
pF1KE0 RLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLA
       :::::::::::::::.::::::.::::::::::::...:: :.:..:::.::::::::::
XP_006 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA
              120       130       140       150       160       170

           240       250       260       270       280       290   
pF1KE0 YIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
       :::: :.:::::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_006 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
              180       190       200       210       220       230

           300       310       320       330       340       350   
pF1KE0 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
              240       250       260       270       280       290

           360       370       380       390       400       410   
pF1KE0 FKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQL
       :::::::::::::::. ::::::::::: ::::::..::.::::::::::::::  ...:
XP_006 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL
              300       310       320       330       340       350

           420       430       440       450       460       470   
pF1KE0 PNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQST
       ::.:  : ::::.                                               
XP_006 PNGRDTPALFNFTTQDANTGDRGQTNNAASASASNST                       
              360       370       380                              

>>XP_006713673 (OMIM: 605004) PREDICTED: glycogen syntha  (400 aa)
 initn: 2009 init1: 1673 opt: 1676  Z-score: 593.8  bits: 119.0 E(85289): 2.4e-26
Smith-Waterman score: 1947; 82.0% identity (90.7% similar) in 356 aa overlap (84-426:21-376)

            60        70        80        90       100       110   
pF1KE0 GAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPER
                                     ..:    :.  .:..:::::::: ::::.:
XP_006           MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR
                         10        20        30        40        50

           120       130       140       150       160       170   
pF1KE0 SQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
        :::.::: ::::::::::::::.: .. :::::::::::::::::::::::::::::::
XP_006 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
               60        70        80        90       100       110

           180       190       200       210       220       230   
pF1KE0 RLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLA
       :::::::::::::::.::::::.::::::::::::...:: :.:..:::.::::::::::
XP_006 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA
              120       130       140       150       160       170

           240       250       260       270       280       290   
pF1KE0 YIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
       :::: :.:::::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_006 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
              180       190       200       210       220       230

           300       310       320       330       340       350   
pF1KE0 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
              240       250       260       270       280       290

           360                    370       380       390       400
pF1KE0 FKFPQIKAHPWTK-------------VFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAH
       :::::::::::::             ::. ::::::::::: ::::::..::.:::::::
XP_006 FKFPQIKAHPWTKDSSGTGHFTSGVRVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH
              300       310       320       330       340       350

              410       420       430       440       450       460
pF1KE0 SFFDELRCLGTQLPNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQA
       :::::::  ...:::.:  : ::::.                                  
XP_006 SFFDELRDPNVKLPNGRDTPALFNFTTQDANTGDRGQTNNAASASASNST          
              360       370       380       390       400          

>>NP_002084 (OMIM: 605004) glycogen synthase kinase-3 be  (433 aa)
 initn: 2106 init1: 1673 opt: 1676  Z-score: 593.5  bits: 119.1 E(85289): 2.6e-26
Smith-Waterman score: 2046; 75.6% identity (87.9% similar) in 414 aa overlap (84-483:21-433)

            60        70        80        90       100       110   
pF1KE0 GAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPER
                                     ..:    :.  .:..:::::::: ::::.:
NP_002           MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR
                         10        20        30        40        50

           120       130       140       150       160       170   
pF1KE0 SQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
        :::.::: ::::::::::::::.: .. :::::::::::::::::::::::::::::::
NP_002 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIV
               60        70        80        90       100       110

           180       190       200       210       220       230   
pF1KE0 RLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLA
       :::::::::::::::.::::::.::::::::::::...:: :.:..:::.::::::::::
NP_002 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA
              120       130       140       150       160       170

           240       250       260       270       280       290   
pF1KE0 YIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
       :::: :.:::::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_002 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG
              180       190       200       210       220       230

           300       310       320       330       340       350   
pF1KE0 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE
              240       250       260       270       280       290

           360                    370       380       390       400
pF1KE0 FKFPQIKAHPWTK-------------VFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAH
       :::::::::::::             ::. ::::::::::: ::::::..::.:::::::
NP_002 FKFPQIKAHPWTKDSSGTGHFTSGVRVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH
              300       310       320       330       340       350

              410       420       430       440       450       460
pF1KE0 SFFDELRCLGTQLPNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQA
       :::::::  ...:::.:  : ::::.. ::: .: : .:::::: :  :...: : .. :
NP_002 SFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAA
              360       370       380       390       400       410

              470        480   
pF1KE0 LTETPTSSDWQSTDA-TPTLTNSS
        ... :..  :...: . . .::.
NP_002 -SDANTGDRGQTNNAASASASNST
               420       430   

>>NP_001789 (OMIM: 116953) cyclin-dependent kinase 2 iso  (298 aa)
 initn: 525 init1: 362 opt: 605  Z-score: 238.1  bits: 52.8 E(85289): 1.6e-06
Smith-Waterman score: 605; 36.4% identity (67.5% similar) in 305 aa overlap (119-406:4-289)

       90       100       110       120       130       140        
pF1KE0 PGVKLGRDSGKVTTVVATLGQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIK
                                     .  .. ::.:..::::.::   : :.::.:
NP_001                            MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK
                                          10        20        30   

      150             160       170       180       190       200  
pF1KE0 KVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKKDELYLNLVLEYVPETV
       :.  : . ..      ::......:.: :::.:   ...    ...::  ::.:.. . .
NP_001 KIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT----ENKLY--LVFEFLHQDL
            40        50        60        70              80       

            210         220       230       240       250       260
pF1KE0 YRVARHFTKAK-LT-IPILYVKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLK
           ..:  :. :: ::.  .: :..::...::. ::. : :::.::::::.. . :. :
NP_001 ----KKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI-K
            90       100       110       120       130       140   

              270          280       290       300       310       
pF1KE0 LCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ
       : ::: :. .  : :  .:   . . .:::::...:   :....:.:: ::..::..  .
NP_001 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR
            150         160       170       180       190       200

       320       330       340          350       360       370    
pF1KE0 PIFPGDSGVDQLVEIIKVLGTPTR---EQIREMNPNYTEFKFPQIKAHPWTKVFKSRTPP
        .::::: .::: .:...:::: .     .  : :.:   .::.   . ..::    .::
NP_001 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM-PDYKP-SFPKWARQDFSKV----VPP
              210       220       230         240       250        

             380       390       400       410       420       430 
pF1KE0 ---EAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLPPLFNFSAGELS
          .. .: :..:.: :..:.:   : :: ::...                         
NP_001 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL                
          260       270       280       290                        

             440       450       460       470       480   
pF1KE0 IQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLTNSS

>>NP_001249 (OMIM: 123828) cyclin-dependent kinase 3 [Ho  (305 aa)
 initn: 490 init1: 331 opt: 594  Z-score: 234.4  bits: 52.1 E(85289): 2.6e-06
Smith-Waterman score: 594; 35.9% identity (67.4% similar) in 301 aa overlap (119-403:4-286)

       90       100       110       120       130       140        
pF1KE0 PGVKLGRDSGKVTTVVATLGQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIK
                                     .  .. ::.:..::::.:.  :: .:::.:
NP_001                            MDMFQKVEKIGEGTYGVVYKAKNRETGQLVALK
                                          10        20        30   

      150             160       170       180       190       200  
pF1KE0 KVLQDKRFKN------RELQIMRKLDHCNIVRLRYFFYSSGEKKDELYLNLVLEYVPETV
       :.  : ....      ::......: : :::::    ..  :.:  :::  :.:.. . .
NP_001 KIRLDLEMEGVPSTAIREISLLKELKHPNIVRLLDVVHN--ERK--LYL--VFEFLSQDL
            40        50        60        70              80       

            210       220       230       240       250       260  
pF1KE0 YRVARHFTKAKLTIPILYVKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLC
        .       ..:  :.  .: :..::...... ::. : :::.::::::.. . ...:: 
NP_001 KKYMDSTPGSEL--PLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLIN-ELGAIKLA
        90         100       110       120       130        140    

            270          280       290       300       310         
pF1KE0 DFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI
       ::: :. .  : :  .:   . . .:::::...:.  ::...:.:: ::..::..  . .
NP_001 DFGLARAF--GVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKAL
          150         160       170       180       190       200  

     320       330       340          350       360        370     
pF1KE0 FPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEFKFPQIKAHPWT-KVFKSRTP--
       ::::: .::: .:...::::...    . .. :.: . .::.     :: : ..  .:  
NP_001 FPGDSEIDQLFRIFRMLGTPSEDTWPGVTQL-PDY-KGSFPK-----WTRKGLEEIVPNL
            210       220       230         240            250     

            380       390       400       410       420       430  
pF1KE0 -PEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLPPLFNFSAGELSI
        ::.  :  .::.: ::.:..   : :: .:                             
NP_001 EPEGRDLLMQLLQYDPSQRITAKTALAHPYFSSPEPSPAARQYVLQRFRH          
         260       270       280       290       300               

            440       450       460       470       480   
pF1KE0 QPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLTNSS

>>NP_001790 (OMIM: 601955) cyclin-dependent kinase 7 iso  (346 aa)
 initn: 347 init1: 347 opt: 582  Z-score: 229.9  bits: 51.5 E(85289): 4.6e-06
Smith-Waterman score: 615; 36.6% identity (66.4% similar) in 339 aa overlap (113-433:6-328)

             90       100       110       120       130       140  
pF1KE0 GTSFPPPGVKLGRDSGKVTTVVATLGQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETR
                                     .:.   :  .  .:.:.:..::.::  .: 
NP_001                          MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTN
                                        10        20        30     

            150                160       170       180       190   
pF1KE0 ELVAIKKVLQDKRFKN---------RELQIMRKLDHCNIVRLRYFFYSSGEKKDELYLNL
       ..:::::.   .: .          ::......:.: ::. :   :   :.:..   ..:
NP_001 QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF---GHKSN---ISL
          40        50        60        70        80               

           200       210       220       230       240       250   
pF1KE0 VLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVD
       :.... ::  .:   .   .:..   ..:.:: . ...: :.:.. . :::.::.:::.:
NP_001 VFDFM-ETDLEVI--IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD
      90        100         110       120       130       140      

           260       270          280       290       300       310
pF1KE0 PDTAVLKLCDFGSAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSIDVWSAGCVL
        ...:::: ::: ::..  : :: .:   . .:.::::::.:::  :  ..:.:..::.:
NP_001 -ENGVLKLADFGLAKSF--GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL
         150       160         170       180       190       200   

              320       330       340         350        360       
pF1KE0 AELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN--PNYTEFK-FPQIKAHPWTKV
       :::::  :..:::: .:::..:...:::::.::  .:   :.:. :: :: :  :   ..
NP_001 AELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH---HI
           210       220       230       240       250          260

       370       380       390       400         410        420    
pF1KE0 FKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELR--CLGTQLPN-NRPLPPLFN
       : : .  . . : ..:. ..: .:..  .:   ..:..      : :::  : :.  : .
NP_001 F-SAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKE
               270       280       290       300       310         

          430       440       450       460       470       480   
pF1KE0 FSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLTNSS
        :   :.:.                                                  
NP_001 QSNPALAIKRKRTEALEQGGLPKKLIF                                
     320       330       340                                      

>>NP_002737 (OMIM: 601795) mitogen-activated protein kin  (379 aa)
 initn: 464 init1: 263 opt: 583  Z-score: 229.8  bits: 51.6 E(85289): 4.6e-06
Smith-Waterman score: 583; 32.4% identity (62.6% similar) in 377 aa overlap (75-434:8-356)

           50        60        70        80        90       100    
pF1KE0 GTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVV
                                     ::.::    :    :::      :.:  : 
NP_002                        MAAAAAQGGGGGEPRRTEGVGPGV-----PGEVEMVK
                                      10        20             30  

           110       120       130       140       150             
pF1KE0 AT-LGQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKV--LQDKRFKNR--
       .  .  ::.      ::... ::.:..:.: .:     .  :::::.  .. . . .:  
NP_002 GQPFDVGPR------YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL
             40              50        60        70        80      

      160       170       180        190       200       210       
pF1KE0 -ELQIMRKLDHCNIVRLRYFFYSSG-EKKDELYLNLVLEYVPETVYRVARHFTKAKLTIP
        :.::. .. : :.. .: .. .:  :   ..:.  : . .   .:.. .   . .:.  
NP_002 REIQILLRFRHENVIGIRDILRASTLEAMRDVYI--VQDLMETDLYKLLK---SQQLSND
         90       100       110       120         130          140 

       220       230       240       250       260       270       
pF1KE0 ILYVKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPN-
         ..  ..::..:.: :::: .: :::.::.:::..  :  ::.:::: :. ..  : . 
NP_002 --HICYFLYQILRGLKYIHSANVLHRDLKPSNLLINT-TCDLKICDFGLAR-IADPEHDH
               150       160       170        180        190       

            280       290       300       310       320       330  
pF1KE0 ----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI
           . :. .:.:::::.....  ::.:::.::.::.:::.: ..:::::   .::: .:
NP_002 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI
       200       210       220       230       240       250       

            340           350       360       370       380        
pF1KE0 IKVLGTPTREQIR---EMNP-NYTEFKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTP
       . .::.:..:..    .:.  :: . ..:.     :.:.:  ..  .:. : . .: ..:
NP_002 LGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFP-KSDSKALDLLDRMLTFNP
       260       270       280        290        300       310     

      390       400       410       420        430       440       
pF1KE0 SSRLSPLEACAHSFFDELRCLGTQLPNNRPLPPL-FNFSAGELSIQPSLNAILIPPHLRS
       ..:..  :: :: ....        :...:.    :.: : ::.  :             
NP_002 NKRITVEEALAHPYLEQY-----YDPTDEPVAEEPFTF-AMELDDLPKERLKELIFQETA
         320       330            340        350       360         

       450       460       470       480   
pF1KE0 PAGTTTLTPSSQALTETPTSSDWQSTDATPTLTNSS
                                           
NP_002 RFQPGVLEAP                          
     370                                   

>>NP_001035145 (OMIM: 601795) mitogen-activated protein   (357 aa)
 initn: 464 init1: 263 opt: 582  Z-score: 229.7  bits: 51.5 E(85289): 4.7e-06
Smith-Waterman score: 582; 32.9% identity (64.0% similar) in 347 aa overlap (75-405:8-332)

           50        60        70        80        90       100    
pF1KE0 GTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVV
                                     ::.::    :    :::      :.:  : 
NP_001                        MAAAAAQGGGGGEPRRTEGVGPGVP-----GEVEMVK
                                      10        20             30  

           110       120       130       140       150             
pF1KE0 AT-LGQGPERSQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKV--LQDKRFKNR--
       .  .  ::.      ::... ::.:..:.: .:     .  :::::.  .. . . .:  
NP_001 GQPFDVGPR------YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL
             40              50        60        70        80      

      160       170       180        190       200       210       
pF1KE0 -ELQIMRKLDHCNIVRLRYFFYSSG-EKKDELYLNLVLEYVPETVYRVARHFTKAKLTIP
        :.::. .. : :.. .: .. .:  :   ..:.  : . .   .:.. .   . .:.  
NP_001 REIQILLRFRHENVIGIRDILRASTLEAMRDVYI--VQDLMETDLYKLLK---SQQLSND
         90       100       110       120         130          140 

       220       230       240       250       260       270       
pF1KE0 ILYVKVYMYQLFRSLAYIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPN-
         ..  ..::..:.: :::: .: :::.::.:::..  :  ::.:::: :. ..  : . 
NP_001 --HICYFLYQILRGLKYIHSANVLHRDLKPSNLLINT-TCDLKICDFGLAR-IADPEHDH
               150       160       170        180        190       

            280       290       300       310       320       330  
pF1KE0 ----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI
           . :. .:.:::::.....  ::.:::.::.::.:::.: ..:::::   .::: .:
NP_001 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI
       200       210       220       230       240       250       

            340           350       360       370       380        
pF1KE0 IKVLGTPTREQIR---EMNP-NYTEFKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTP
       . .::.:..:..    .:.  :: . ..:.     :.:.:  ..  .:. : . .: ..:
NP_001 LGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFP-KSDSKALDLLDRMLTFNP
       260       270       280        290        300       310     

      390       400       410       420       430       440        
pF1KE0 SSRLSPLEACAHSFFDELRCLGTQLPNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSP
       ..:..  :: :: ....                                           
NP_001 NKRITVEEALAHPYLEQYYDPTDEVGQSPAAVGLGAGEQGGT                  
         320       330       340       350                         




483 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 06:09:29 2016 done: Sun Nov  6 06:09:30 2016
 Total Scan time: 11.100 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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