FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0955, 483 aa 1>>>pF1KE0955 483 - 483 aa - 483 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.8106+/-0.00136; mu= -15.8727+/- 0.080 mean_var=600.4944+/-129.714, 0's: 0 Z-trim(114.0): 418 B-trim: 0 in 0/51 Lambda= 0.052338 statistics sampled from 14119 (14575) to 14119 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.448), width: 16 Scan time: 3.110 The best scores are: opt bits E(32554) CCDS12599.1 GSK3A gene_id:2931|Hs108|chr19 ( 483) 3250 260.4 3e-69 CCDS54628.1 GSK3B gene_id:2932|Hs108|chr3 ( 420) 2082 172.2 9.7e-43 CCDS2996.1 GSK3B gene_id:2932|Hs108|chr3 ( 433) 1676 141.5 1.7e-33 >>CCDS12599.1 GSK3A gene_id:2931|Hs108|chr19 (483 aa) initn: 3250 init1: 3250 opt: 3250 Z-score: 1356.7 bits: 260.4 E(32554): 3e-69 Smith-Waterman score: 3250; 100.0% identity (100.0% similar) in 483 aa overlap (1-483:1-483) 10 20 30 40 50 60 pF1KE0 MSGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MSGGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPERSQEVAYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 GASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPERSQEVAYT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 DIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 DIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 SSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLAYIHSQGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLAYIHSQGV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 CHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 CHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE0 AHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 AHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQLPNNRPLP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE0 PLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQSTDATPTLT 430 440 450 460 470 480 pF1KE0 NSS ::: CCDS12 NSS >>CCDS54628.1 GSK3B gene_id:2932|Hs108|chr3 (420 aa) initn: 2131 init1: 2065 opt: 2082 Z-score: 880.8 bits: 172.2 E(32554): 9.7e-43 Smith-Waterman score: 2082; 78.1% identity (90.8% similar) in 401 aa overlap (84-483:21-420) 60 70 80 90 100 110 pF1KE0 GAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPER ..: :. .:..:::::::: ::::.: CCDS54 MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR 10 20 30 40 50 120 130 140 150 160 170 pF1KE0 SQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIV :::.::: ::::::::::::::.: .. ::::::::::::::::::::::::::::::: CCDS54 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 60 70 80 90 100 110 180 190 200 210 220 230 pF1KE0 RLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLA :::::::::::::::.::::::.::::::::::::...:: :.:..:::.:::::::::: CCDS54 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 120 130 140 150 160 170 240 250 260 270 280 290 pF1KE0 YIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG :::: :.:::::::::::.::::::::::::::::::::::::::::::::::::::::: CCDS54 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 180 190 200 210 220 230 300 310 320 330 340 350 pF1KE0 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 240 250 260 270 280 290 360 370 380 390 400 410 pF1KE0 FKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRCLGTQL :::::::::::::::. ::::::::::: ::::::..::.:::::::::::::: ...: CCDS54 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKL 300 310 320 330 340 350 420 430 440 450 460 470 pF1KE0 PNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQALTETPTSSDWQST ::.: : ::::.. ::: .: : .:::::: : :...: : .. : ... :.. :.. CCDS54 PNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAA-SDANTGDRGQTN 360 370 380 390 400 480 pF1KE0 DA-TPTLTNSS .: . . .::. CCDS54 NAASASASNST 410 420 >>CCDS2996.1 GSK3B gene_id:2932|Hs108|chr3 (433 aa) initn: 2106 init1: 1673 opt: 1676 Z-score: 714.9 bits: 141.5 E(32554): 1.7e-33 Smith-Waterman score: 2046; 75.6% identity (87.9% similar) in 414 aa overlap (84-483:21-433) 60 70 80 90 100 110 pF1KE0 GAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGRDSGKVTTVVATLGQGPER ..: :. .:..:::::::: ::::.: CCDS29 MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDR 10 20 30 40 50 120 130 140 150 160 170 pF1KE0 SQEVAYTDIKVIGNGSFGVVYQARLAETRELVAIKKVLQDKRFKNRELQIMRKLDHCNIV :::.::: ::::::::::::::.: .. ::::::::::::::::::::::::::::::: CCDS29 PQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 60 70 80 90 100 110 180 190 200 210 220 230 pF1KE0 RLRYFFYSSGEKKDELYLNLVLEYVPETVYRVARHFTKAKLTIPILYVKVYMYQLFRSLA :::::::::::::::.::::::.::::::::::::...:: :.:..:::.:::::::::: CCDS29 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 120 130 140 150 160 170 240 250 260 270 280 290 pF1KE0 YIHSQGVCHRDIKPQNLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG :::: :.:::::::::::.::::::::::::::::::::::::::::::::::::::::: CCDS29 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 180 190 200 210 220 230 300 310 320 330 340 350 pF1KE0 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 240 250 260 270 280 290 360 370 380 390 400 pF1KE0 FKFPQIKAHPWTK-------------VFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAH ::::::::::::: ::. ::::::::::: ::::::..::.::::::: CCDS29 FKFPQIKAHPWTKDSSGTGHFTSGVRVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 300 310 320 330 340 350 410 420 430 440 450 460 pF1KE0 SFFDELRCLGTQLPNNRPLPPLFNFSAGELSIQPSLNAILIPPHLRSPAGTTTLTPSSQA ::::::: ...:::.: : ::::.. ::: .: : .:::::: : :...: : .. : CCDS29 SFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAA 360 370 380 390 400 410 470 480 pF1KE0 LTETPTSSDWQSTDA-TPTLTNSS ... :.. :...: . . .::. CCDS29 -SDANTGDRGQTNNAASASASNST 420 430 483 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:09:28 2016 done: Sun Nov 6 06:09:28 2016 Total Scan time: 3.110 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]