FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1469, 93 aa 1>>>pF1KE1469 93 - 93 aa - 93 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.2550+/-0.000527; mu= 13.8297+/- 0.032 mean_var=45.9654+/- 9.094, 0's: 0 Z-trim(112.9): 44 B-trim: 216 in 1/48 Lambda= 0.189173 statistics sampled from 13569 (13614) to 13569 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.418), width: 16 Scan time: 1.300 The best scores are: opt bits E(32554) CCDS10778.1 CCL22 gene_id:6367|Hs108|chr16 ( 93) 626 177.0 1.5e-45 CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 ( 89) 206 62.3 4.6e-11 >>CCDS10778.1 CCL22 gene_id:6367|Hs108|chr16 (93 aa) initn: 626 init1: 626 opt: 626 Z-score: 931.3 bits: 177.0 E(32554): 1.5e-45 Smith-Waterman score: 626; 98.9% identity (98.9% similar) in 93 aa overlap (1-93:1-93) 10 20 30 40 50 60 pF1KE1 MARLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSC : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MDRLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSC 10 20 30 40 50 60 70 80 90 pF1KE1 PRPGVVLLTFRDKEICADPRVPWVKMILNKLSQ ::::::::::::::::::::::::::::::::: CCDS10 PRPGVVLLTFRDKEICADPRVPWVKMILNKLSQ 70 80 90 >>CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 (89 aa) initn: 221 init1: 187 opt: 206 Z-score: 312.1 bits: 62.3 E(32554): 4.6e-11 Smith-Waterman score: 206; 37.4% identity (61.5% similar) in 91 aa overlap (1-91:1-85) 10 20 30 40 50 60 pF1KE1 MARLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSC : : .::::.. .:. : :.: : .:: :. ...: . . . :: .: CCDS11 MKGLAAALLVLVCTMALCSCAQ----VGTNKE--LCCLVYTSWQIPQKFIVDYSETSPQC 10 20 30 40 50 70 80 90 pF1KE1 PRPGVVLLTFRDKEICADPRVPWVKMILNKLSQ :.:::.::: : ..::::: ::. .. : CCDS11 PKPGVILLTKRGRQICADPNKKWVQKYISDLKLNA 60 70 80 93 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:24:43 2016 done: Mon Nov 7 00:24:43 2016 Total Scan time: 1.300 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]