Result of FASTA (omim) for
pFN21AB4961
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4961, 218 aa
1>>>pF1KB4961 218 - 218 aa - 218 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3496+/-0.000411; mu= 19.2644+/- 0.026
mean_var=80.0031+/-15.370, 0's: 0 Z-trim(113.5): 408 B-trim: 0 in 0/49
Lambda= 0.143391
statistics sampled from 22420 (22888) to 22420 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.268), width: 16
Scan time: 6.060
The best scores are: opt bits E(85289)
XP_016881402 (OMIM: 603869) PREDICTED: ras-related ( 218) 1460 311.5 7e-85
NP_004154 (OMIM: 603869) ras-related protein Rab-2 ( 218) 1460 311.5 7e-85
XP_016881403 (OMIM: 603869) PREDICTED: ras-related ( 218) 1460 311.5 7e-85
XP_005266790 (OMIM: 603869) PREDICTED: ras-related ( 218) 1460 311.5 7e-85
NP_004571 (OMIM: 603868,607624) ras-related protei ( 221) 1064 229.6 3.2e-60
NP_899059 (OMIM: 603868,607624) ras-related protei ( 221) 1064 229.6 3.2e-60
NP_899058 (OMIM: 603868,607624) ras-related protei ( 221) 1064 229.6 3.2e-60
XP_005254633 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1064 229.6 3.2e-60
NP_899057 (OMIM: 603868,607624) ras-related protei ( 221) 1064 229.6 3.2e-60
XP_011520156 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1064 229.6 3.2e-60
XP_011520154 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1064 229.6 3.2e-60
XP_011520157 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1064 229.6 3.2e-60
XP_011520158 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 1064 229.6 3.2e-60
XP_006722581 (OMIM: 603869) PREDICTED: ras-related ( 182) 1043 225.1 5.8e-59
XP_011524433 (OMIM: 603869) PREDICTED: ras-related ( 182) 1043 225.1 5.8e-59
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 442 100.9 1.8e-21
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 442 100.9 1.8e-21
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 439 100.3 2.7e-21
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 423 97.0 2.7e-20
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 423 97.0 2.7e-20
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 386 89.3 5.2e-18
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 385 89.1 6e-18
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 376 87.2 2.1e-17
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 376 87.2 2.2e-17
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 373 86.6 3.4e-17
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 371 86.2 4.4e-17
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 369 85.8 6.1e-17
NP_001157462 (OMIM: 609956) ras-related protein Ra ( 186) 368 85.5 6.4e-17
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 367 85.3 7.7e-17
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 367 85.4 8.1e-17
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 367 85.4 8.3e-17
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 367 85.4 8.4e-17
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 360 83.9 2.1e-16
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 349 81.6 1e-15
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 346 80.9 1.5e-15
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 346 81.1 1.8e-15
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 342 80.2 2.9e-15
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 341 80.0 3.4e-15
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 336 78.9 7e-15
XP_005251788 (OMIM: 611344) PREDICTED: ras and EF- ( 611) 337 79.7 1.1e-14
XP_005251787 (OMIM: 611344) PREDICTED: ras and EF- ( 717) 337 79.8 1.3e-14
NP_689786 (OMIM: 611344) ras and EF-hand domain-co ( 740) 337 79.8 1.3e-14
XP_006722363 (OMIM: 616448) PREDICTED: ras-related ( 212) 328 77.3 2.2e-14
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 328 77.4 2.4e-14
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 326 76.9 2.9e-14
XP_011520752 (OMIM: 605455) PREDICTED: ras-related ( 140) 323 76.0 3.4e-14
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 323 76.7 7.5e-14
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 323 76.7 7.5e-14
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 323 76.9 9.6e-14
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 323 76.9 9.6e-14
>>XP_016881402 (OMIM: 603869) PREDICTED: ras-related pro (218 aa)
initn: 1460 init1: 1460 opt: 1460 Z-score: 1644.8 bits: 311.5 E(85289): 7e-85
Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
::::::::::::::::::::::::::::::::::::::
XP_016 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
190 200 210
>>NP_004154 (OMIM: 603869) ras-related protein Rab-27B [ (218 aa)
initn: 1460 init1: 1460 opt: 1460 Z-score: 1644.8 bits: 311.5 E(85289): 7e-85
Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
::::::::::::::::::::::::::::::::::::::
NP_004 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
190 200 210
>>XP_016881403 (OMIM: 603869) PREDICTED: ras-related pro (218 aa)
initn: 1460 init1: 1460 opt: 1460 Z-score: 1644.8 bits: 311.5 E(85289): 7e-85
Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
::::::::::::::::::::::::::::::::::::::
XP_016 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
190 200 210
>>XP_005266790 (OMIM: 603869) PREDICTED: ras-related pro (218 aa)
initn: 1460 init1: 1460 opt: 1460 Z-score: 1644.8 bits: 311.5 E(85289): 7e-85
Smith-Waterman score: 1460; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
::::::::::::::::::::::::::::::::::::::
XP_005 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC
190 200 210
>>NP_004571 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1202.0 bits: 229.6 E(85289): 3.2e-60
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-218:1-221)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
NP_004 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
NP_004 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
NP_004 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
::::::.::.:. ::. : :: : . .:. . : :
NP_004 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>NP_899059 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1202.0 bits: 229.6 E(85289): 3.2e-60
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-218:1-221)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
NP_899 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
NP_899 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
NP_899 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
::::::.::.:. ::. : :: : . .:. . : :
NP_899 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>NP_899058 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1202.0 bits: 229.6 E(85289): 3.2e-60
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-218:1-221)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
NP_899 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
NP_899 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
NP_899 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
::::::.::.:. ::. : :: : . .:. . : :
NP_899 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_005254633 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1202.0 bits: 229.6 E(85289): 3.2e-60
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-218:1-221)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
XP_005 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
XP_005 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
XP_005 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
::::::.::.:. ::. : :: : . .:. . : :
XP_005 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>NP_899057 (OMIM: 603868,607624) ras-related protein Ra (221 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1202.0 bits: 229.6 E(85289): 3.2e-60
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-218:1-221)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
NP_899 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
NP_899 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
NP_899 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
::::::.::.:. ::. : :: : . .:. . : :
NP_899 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
>>XP_011520156 (OMIM: 603868,607624) PREDICTED: ras-rela (221 aa)
initn: 1067 init1: 1038 opt: 1064 Z-score: 1202.0 bits: 229.6 E(85289): 3.2e-60
Smith-Waterman score: 1064; 71.5% identity (87.3% similar) in 221 aa overlap (1-218:1-221)
10 20 30 40 50 60
pF1KB4 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG
:.:::::::::.:::::::::::. ::.:::.::: ::::::::::::::::: :.::.:
XP_011 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
..:.. ..:::::::::::::::::::::::::::::.::::..:::::::::.:::: .
XP_011 ATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL
:::::::::: :::.:: ::: :.:..: ::.::::::::::::.: :. .:.: ::::
XP_011 AYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDL
130 140 150 160 170 180
190 200 210
pF1KB4 IMKRMEQCVEKTQIPDTV---NGGNSGNLDGEKPPEKKCIC
::::::.::.:. ::. : :: : . .:. . : :
XP_011 IMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGACGC
190 200 210 220
218 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:09:25 2016 done: Sat Nov 5 06:09:25 2016
Total Scan time: 6.060 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]