FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6440, 575 aa 1>>>pF1KE6440 575 - 575 aa - 575 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4604+/-0.000914; mu= 17.9197+/- 0.055 mean_var=65.2845+/-13.174, 0's: 0 Z-trim(105.1): 22 B-trim: 387 in 1/47 Lambda= 0.158734 statistics sampled from 8259 (8271) to 8259 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.254), width: 16 Scan time: 2.110 The best scores are: opt bits E(32554) CCDS5448.1 AOAH gene_id:313|Hs108|chr7 ( 575) 3983 921.2 0 CCDS75584.1 AOAH gene_id:313|Hs108|chr7 ( 688) 3688 853.7 0 CCDS55102.1 AOAH gene_id:313|Hs108|chr7 ( 543) 3497 809.9 0 >>CCDS5448.1 AOAH gene_id:313|Hs108|chr7 (575 aa) initn: 3983 init1: 3983 opt: 3983 Z-score: 4925.1 bits: 921.2 E(32554): 0 Smith-Waterman score: 3983; 100.0% identity (100.0% similar) in 575 aa overlap (1-575:1-575) 10 20 30 40 50 60 pF1KE6 MQSPWKILTVAPLFLLLSLQSSASPANDDQSRPSLSNGHTCVGCVLVVSVIEQLAQVHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MQSPWKILTVAPLFLLLSLQSSASPANDDQSRPSLSNGHTCVGCVLVVSVIEQLAQVHNS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TVQASMERLCSYLPEKLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TVQASMERLCSYLPEKLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PLCHLYPLPKETWKFTLQKARQIVKKSPILKYSRSGSDICSLPVLAKICQKIKLAMEQSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PLCHLYPLPKETWKFTLQKARQIVKKSPILKYSRSGSDICSLPVLAKICQKIKLAMEQSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PFKDVDSDKYSVFPTLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PFKDVDSDKYSVFPTLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 GVPYEKKFCEGSQPRGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GVPYEKKFCEGSQPRGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 LSGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LSGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 DYPAIVIYAMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 DYPAIVIYAMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 GTFLWDNLHNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GTFLWDNLHNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 SNTLKKIAASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNEVALLLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SNTLKKIAASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNEVALLLLA 490 500 510 520 530 540 550 560 570 pF1KE6 DHFWKKVQLQWPQILGKENPFNPQIKQVFGDQGGH ::::::::::::::::::::::::::::::::::: CCDS54 DHFWKKVQLQWPQILGKENPFNPQIKQVFGDQGGH 550 560 570 >>CCDS75584.1 AOAH gene_id:313|Hs108|chr7 (688 aa) initn: 3685 init1: 3685 opt: 3688 Z-score: 4558.8 bits: 853.7 E(32554): 0 Smith-Waterman score: 3688; 96.6% identity (97.5% similar) in 557 aa overlap (1-554:1-557) 10 20 30 40 50 60 pF1KE6 MQSPWKILTVAPLFLLLSLQSSASPANDDQSRPSLSNGHTCVGCVLVVSVIEQLAQVHNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MQSPWKILTVAPLFLLLSLQSSASPANDDQSRPSLSNGHTCVGCVLVVSVIEQLAQVHNS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TVQASMERLCSYLPEKLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 TVQASMERLCSYLPEKLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PLCHLYPLPKETWKFTLQKARQIVKKSPILKYSRSGSDICSLPVLAKICQKIKLAMEQSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PLCHLYPLPKETWKFTLQKARQIVKKSPILKYSRSGSDICSLPVLAKICQKIKLAMEQSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PFKDVDSDKYSVFPTLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PFKDVDSDKYSVFPTLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 GVPYEKKFCEGSQPRGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GVPYEKKFCEGSQPRGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 LSGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LSGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 DYPAIVIYAMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 DYPAIVIYAMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 GTFLWDNLHNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GTFLWDNLHNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 SNTLKKIAASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNEVALLLLA ::::::::::::::::::::::::::::::::::::::::::::::::::::: .:: CCDS75 SNTLKKIAASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNERKSILLK 490 500 510 520 530 540 550 560 570 pF1KE6 DHFWKKVQL---QWPQILGKENPFNPQIKQVFGDQGGH . . : .: :. CCDS75 GILMTSQTLDNQEWTQLTSWIKGNLTCDSRTREWLCCCWRIISGKRCSSSGPKSWERRIR 550 560 570 580 590 600 >>CCDS55102.1 AOAH gene_id:313|Hs108|chr7 (543 aa) initn: 3763 init1: 3497 opt: 3497 Z-score: 4324.0 bits: 809.9 E(32554): 0 Smith-Waterman score: 3703; 94.4% identity (94.4% similar) in 575 aa overlap (1-575:1-543) 10 20 30 40 50 60 pF1KE6 MQSPWKILTVAPLFLLLSLQSSASPANDDQSRPSLSNGHTCVGCVLVVSVIEQLAQVHNS :::::::::::::::::::::::::::::::::::::::::: CCDS55 MQSPWKILTVAPLFLLLSLQSSASPANDDQSRPSLSNGHTCV------------------ 10 20 30 40 70 80 90 100 110 120 pF1KE6 TVQASMERLCSYLPEKLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQ :::::::::::::::::::::::::::::::::::::::::::::: CCDS55 --------------EKLFLKTTCYLVIDKFGSDIIKLLSADMNADVVCHTLEFCKQNTGQ 50 60 70 80 130 140 150 160 170 180 pF1KE6 PLCHLYPLPKETWKFTLQKARQIVKKSPILKYSRSGSDICSLPVLAKICQKIKLAMEQSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PLCHLYPLPKETWKFTLQKARQIVKKSPILKYSRSGSDICSLPVLAKICQKIKLAMEQSV 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE6 PFKDVDSDKYSVFPTLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PFKDVDSDKYSVFPTLRGYHWRGRDCNDSDESVYPGRRPNNWDVHQDSNCNGIWGVDPKD 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE6 GVPYEKKFCEGSQPRGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GVPYEKKFCEGSQPRGIILLGDSAGAHFHISPEWITASQMSLNSFINLPTALTNELDWPQ 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE6 LSGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LSGATGFLDSTVGIKEKSIYLRLWKRNHCNHRDYQNISRNGASSRNLKKFIESLSRNKVL 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE6 DYPAIVIYAMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DYPAIVIYAMIGNDVCSGKSDPVPAMTTPEKLYSNVMQTLKHLNSHLPNGSHVILYGLPD 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE6 GTFLWDNLHNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GTFLWDNLHNRYHPLGQLNKDMTYAQLYSFLNCLQVSPCHGWMSSNKTLRTLTSERAEQL 390 400 410 420 430 440 490 500 510 520 530 540 pF1KE6 SNTLKKIAASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNEVALLLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SNTLKKIAASEKFTNFNLFYMDFAFHEIIQEWQKRGGQPWQLIEPVDGFHPNEVALLLLA 450 460 470 480 490 500 550 560 570 pF1KE6 DHFWKKVQLQWPQILGKENPFNPQIKQVFGDQGGH ::::::::::::::::::::::::::::::::::: CCDS55 DHFWKKVQLQWPQILGKENPFNPQIKQVFGDQGGH 510 520 530 540 575 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:19:11 2016 done: Tue Nov 8 13:19:12 2016 Total Scan time: 2.110 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]