FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5108, 138 aa 1>>>pF1KE5108 138 - 138 aa - 138 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0941+/-0.000251; mu= 0.4517+/- 0.016 mean_var=155.8002+/-31.289, 0's: 0 Z-trim(125.6): 1 B-trim: 552 in 1/54 Lambda= 0.102752 statistics sampled from 49816 (49817) to 49816 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.869), E-opt: 0.2 (0.584), width: 16 Scan time: 4.650 The best scores are: opt bits E(85289) NP_002247 (OMIM: 603286,614842) metastasis-suppres ( 138) 945 149.9 1.2e-36 >>NP_002247 (OMIM: 603286,614842) metastasis-suppressor (138 aa) initn: 945 init1: 945 opt: 945 Z-score: 779.0 bits: 149.9 E(85289): 1.2e-36 Smith-Waterman score: 945; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138) 10 20 30 40 50 60 pF1KE5 MNSLVSWQLLLFLCATHFGEPLEKVASVGNSRPTGQQLESLGLLAPGEQSLPCTERKPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MNSLVSWQLLLFLCATHFGEPLEKVASVGNSRPTGQQLESLGLLAPGEQSLPCTERKPAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TARLSRRGTSLSPPPESSGSPQQPGLSAPHSRQIPAPQGAVLVQREKDLPNYNWNSFGLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 TARLSRRGTSLSPPPESSGSPQQPGLSAPHSRQIPAPQGAVLVQREKDLPNYNWNSFGLR 70 80 90 100 110 120 130 pF1KE5 FGKREAAPGNHGRSAGRG :::::::::::::::::: NP_002 FGKREAAPGNHGRSAGRG 130 138 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:23:57 2016 done: Mon Nov 7 21:23:57 2016 Total Scan time: 4.650 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]