Result of FASTA (ccds) for
pFN21AB6187
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6187, 660 aa
1>>>pF1KB6187 660 - 660 aa - 660 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1164+/-0.00105; mu= 3.4038+/- 0.063
mean_var=234.1102+/-46.420, 0's: 0 Z-trim(112.2): 35 B-trim: 0 in 0/53
Lambda= 0.083823
statistics sampled from 12993 (13027) to 12993 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.4), width: 16
Scan time: 3.740
The best scores are: opt bits E(32554)
CCDS30688.1 SCMH1 gene_id:22955|Hs108|chr1 ( 660) 4556 564.3 1.9e-160
CCDS53302.1 SCMH1 gene_id:22955|Hs108|chr1 ( 599) 4106 509.8 4.3e-144
CCDS53304.1 SCMH1 gene_id:22955|Hs108|chr1 ( 648) 3636 453.0 5.9e-127
CCDS461.1 SCMH1 gene_id:22955|Hs108|chr1 ( 591) 3451 430.6 3e-120
CCDS53301.1 SCMH1 gene_id:22955|Hs108|chr1 ( 577) 3364 420.1 4.3e-117
CCDS53303.1 SCMH1 gene_id:22955|Hs108|chr1 ( 480) 2280 288.9 1.1e-77
CCDS14185.1 SCML2 gene_id:10389|Hs108|chrX ( 700) 1751 225.1 2.6e-58
CCDS5060.2 SCML4 gene_id:256380|Hs108|chr6 ( 414) 785 108.1 2.6e-23
CCDS69163.1 SCML4 gene_id:256380|Hs108|chr6 ( 356) 648 91.5 2.2e-18
CCDS13319.1 L3MBTL1 gene_id:26013|Hs108|chr20 ( 772) 584 84.0 8.6e-16
CCDS46602.2 L3MBTL1 gene_id:26013|Hs108|chr20 ( 840) 584 84.0 9.2e-16
CCDS82238.1 L3MBTL4 gene_id:91133|Hs108|chr18 ( 614) 580 83.4 1e-15
CCDS11839.2 L3MBTL4 gene_id:91133|Hs108|chr18 ( 623) 580 83.4 1e-15
CCDS34538.1 L3MBTL3 gene_id:84456|Hs108|chr6 ( 755) 576 83.0 1.7e-15
CCDS34537.1 L3MBTL3 gene_id:84456|Hs108|chr6 ( 780) 576 83.0 1.7e-15
CCDS14011.1 L3MBTL2 gene_id:83746|Hs108|chr22 ( 705) 467 69.8 1.5e-11
CCDS11581.2 MBTD1 gene_id:54799|Hs108|chr17 ( 628) 462 69.2 2e-11
>>CCDS30688.1 SCMH1 gene_id:22955|Hs108|chr1 (660 aa)
initn: 4556 init1: 4556 opt: 4556 Z-score: 2993.9 bits: 564.3 E(32554): 1.9e-160
Smith-Waterman score: 4556; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 IPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 EPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 IYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 GEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 SHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 SAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 FVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
610 620 630 640 650 660
>>CCDS53302.1 SCMH1 gene_id:22955|Hs108|chr1 (599 aa)
initn: 4106 init1: 4106 opt: 4106 Z-score: 2700.4 bits: 509.8 E(32554): 4.3e-144
Smith-Waterman score: 4106; 100.0% identity (100.0% similar) in 599 aa overlap (62-660:1-599)
40 50 60 70 80 90
pF1KB6 KYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLR
::::::::::::::::::::::::::::::
CCDS53 MKLEAQDPRNTTSTCIATVVGLTGARLRLR
10 20 30
100 110 120 130 140 150
pF1KB6 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB6 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB6 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB6 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB6 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
460 470 480 490 500 510
580 590 600 610 620 630
pF1KB6 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
520 530 540 550 560 570
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::::::::::::::::::::::::::
CCDS53 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
580 590
>>CCDS53304.1 SCMH1 gene_id:22955|Hs108|chr1 (648 aa)
initn: 3634 init1: 3634 opt: 3636 Z-score: 2392.7 bits: 453.0 E(32554): 5.9e-127
Smith-Waterman score: 4171; 96.5% identity (96.5% similar) in 636 aa overlap (25-660:35-648)
10 20 30 40 50
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
::::::::::::::::::::::::::::::
CCDS53 VIDWSDVRKHKYGHLSESASQYQEAADILDLGHFTWDKYLKETCSVPAPVHCFKQSYTPP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQP
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPIS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 APSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB6 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB6 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCG
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB6 LPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWT
:::::::::::::::: ::::::::::::::::::::::
CCDS53 LPPSTASAVRRLCSRG----------------------SDRYLESRDASRLSGRDPSSWT
550 560 570 580
600 610 620 630 640 650
pF1KB6 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDR
590 600 610 620 630 640
660
pF1KB6 LKQGKF
::::::
CCDS53 LKQGKF
>>CCDS461.1 SCMH1 gene_id:22955|Hs108|chr1 (591 aa)
initn: 3449 init1: 3449 opt: 3451 Z-score: 2272.4 bits: 430.6 E(32554): 3e-120
Smith-Waterman score: 3986; 96.4% identity (96.4% similar) in 612 aa overlap (49-660:2-591)
20 30 40 50 60 70
pF1KB6 SIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIA
::::::::::::::::::::::::::::::
CCDS46 MQSYTPPSNEFKISMKLEAQDPRNTTSTCIA
10 20 30
80 90 100 110 120 130
pF1KB6 TVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPM
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 FLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 VTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSI
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB6 HSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRK
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB6 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKV
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB6 QQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLP
340 350 360 370 380 390
440 450 460 470 480 490
pF1KB6 AVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNS
400 410 420 430 440 450
500 510 520 530 540 550
pF1KB6 LARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNER
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRG--------
460 470 480 490 500
560 570 580 590 600 610
pF1KB6 RDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRK
::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 --------------SDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRK
510 520 530 540
620 630 640 650 660
pF1KB6 HEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
::::::::::::::::::::::::::::::::::::::::::
CCDS46 HEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
550 560 570 580 590
>>CCDS53301.1 SCMH1 gene_id:22955|Hs108|chr1 (577 aa)
initn: 3362 init1: 3362 opt: 3364 Z-score: 2215.6 bits: 420.1 E(32554): 4.3e-117
Smith-Waterman score: 3899; 96.3% identity (96.3% similar) in 599 aa overlap (62-660:1-577)
40 50 60 70 80 90
pF1KB6 KYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLR
::::::::::::::::::::::::::::::
CCDS53 MKLEAQDPRNTTSTCIATVVGLTGARLRLR
10 20 30
100 110 120 130 140 150
pF1KB6 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYW
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB6 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPG
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPT
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARAS
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB6 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLE
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB6 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD
400 410 420 430 440 450
520 530 540 550 560 570
pF1KB6 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNERRDMESFWKLNRSP
:::::::::::::::::::::::::::::::::::::::
CCDS53 SASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRG---------------------
460 470 480
580 590 600 610 620 630
pF1KB6 GSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 -SDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRKHEIDGKALLLLRS
490 500 510 520 530 540
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::::::::::::::::::::::::::
CCDS53 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
550 560 570
>>CCDS53303.1 SCMH1 gene_id:22955|Hs108|chr1 (480 aa)
initn: 2625 init1: 2104 opt: 2280 Z-score: 1508.3 bits: 288.9 E(32554): 1.1e-77
Smith-Waterman score: 2944; 78.3% identity (78.3% similar) in 612 aa overlap (49-660:2-480)
20 30 40 50 60 70
pF1KB6 SIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNEFKISMKLEAQDPRNTTSTCIA
::::::::::::::::::::::::::::::
CCDS53 MQSYTPPSNEFKISMKLEAQDPRNTTSTCIA
10 20 30
80 90 100 110 120 130
pF1KB6 TVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPM
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCEKNGGMLQPPL-----------
40 50 60 70 80
140 150 160 170 180 190
pF1KB6 FLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVL
CCDS53 ------------------------------------------------------------
200 210 220 230 240 250
pF1KB6 VTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSI
::::::::::::::::::::
CCDS53 ----------------------------------------VVIPKNPYPASDVNTEKPSI
90 100
260 270 280 290 300 310
pF1KB6 HSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISAPSKTAEPLKFPKKRGPKPGSKRK
110 120 130 140 150 160
320 330 340 350 360 370
pF1KB6 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKV
170 180 190 200 210 220
380 390 400 410 420 430
pF1KB6 QQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEVISAVFDREQHTLNLP
230 240 250 260 270 280
440 450 460 470 480 490
pF1KB6 AVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNS
290 300 310 320 330 340
500 510 520 530 540 550
pF1KB6 LARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKGSNER
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LARSLEPHSDSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRG--------
350 360 370 380 390
560 570 580 590 600 610
pF1KB6 RDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRK
::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 --------------SDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQLGPHADLFRK
400 410 420 430
620 630 640 650 660
pF1KB6 HEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
::::::::::::::::::::::::::::::::::::::::::
CCDS53 HEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
440 450 460 470 480
>>CCDS14185.1 SCML2 gene_id:10389|Hs108|chrX (700 aa)
initn: 2021 init1: 1179 opt: 1751 Z-score: 1160.3 bits: 225.1 E(32554): 2.6e-58
Smith-Waterman score: 2069; 48.5% identity (72.5% similar) in 676 aa overlap (28-658:33-697)
10 20 30 40 50
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAPVHCFKQSYTPPSNE
: :..::::: :. :: .::.:: :: :.
CCDS14 QTVNEDSMDVKKENQEKTPQSSTSSVQRDDFHWEEYLKETGSISAPSECFRQSQIPPVND
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 FKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDFWRLVDSAEIQPIGNCE
::..:::::.::::.::.:::::.:.::::::::::::::.::::::::: .:::.:.::
CCDS14 FKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 KNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPSPSHNFFKMGMKLEAVD
:.: .::::::...:.:::::::::::::.::: .:.::::.: : ::.::::::.:
CCDS14 KEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAID
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 RKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFPVGWCSLTGDNLQPPGT
.:::..:::::::.:.:.:: .::::: :::::::..:::::::.::: :::: ::::::
CCDS14 KKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 KVVIPKN--PYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGRTPKTLISHPISA
.: : :: .: .. . :..: ::.: : :. :. ..: . : : ..
CCDS14 SVPIVKNIAKTESSPSEASQHSMQSPQKTTLI-LPTQQVRR--SSRIKPPG-----PTAV
250 260 270 280 290
300 310 320 330 340 350
pF1KB6 PSKTAEPLKF-PKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPSSAM
:.... .. :.:.::. :.:.:: .. :. : . : . . .:.:. : . .
CCDS14 PKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTR-DRGMLYKDVASGPCKIV
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB6 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
.. :::.:.::.:. ::::: :..:::::::::. ..:::.. ::::.::: . ::::..
CCDS14 MS-TVCVYVNKHGNFGPHLDPKRIQQLPDHFGPGPVNVVLRRIVQACVDCALETKTVFGY
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB6 LK-QGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQT--
:: ...:::::.: :: : :...:: ::: ...:::::..::.:. :::...:::...
CCDS14 LKPDNRGGEVITASFDGETHSIQLPPVNSASFALRFLENFCHSLQCDNLLSSQPFSSSRG
420 430 440 450 460 470
480 490
pF1KB6 HLSLTA-----------IEYSHSHDRY--------------LP--------GETFVLGNS
: .: . .: : :: :: . :.:
CCDS14 HTHSSAEHDKNQSAKEDVTERQSTKRSPQQTVPYVVPLSPKLPKTKEYASEGEPLFAGGS
480 490 500 510 520 530
500 510 520 530 540 550
pF1KB6 LARSLEPHS-DSMDSASNPTNLVSTSQRHRPLLSSCGLPPSTASAVRRLCSRGVLKG-SN
. : : :: .:. : : .. . :. :. .. . . .: : .. :
CCDS14 AIPKEENLSEDSKSSSLNSGNYLNPACRN-PMYIHTSVSQDFSRSVPGTTSSPLVGDISP
540 550 560 570 580 590
560 570 580 590 600 610
pF1KB6 ERRDMESFWKLNRSPGSDRYLESRDASRLS---GRDPSSWTVEDVMQFVREADPQL-GPH
. : ....:. . :. : : :. ..:::.:.:..:.::....:::. ::
CCDS14 KSSPHEVKFQMQRKSEAPSYIAVPDPSVLKQGFSKDPSTWSVDEVIQFMKHTDPQISGPL
600 610 620 630 640 650
620 630 640 650 660
pF1KB6 ADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF
:::::.::::::::.::.::.::::::::::::::: :.:..::.:
CCDS14 ADLFRQHEIDGKALFLLKSDVMMKYMGLKLGPALKLCYYIEKLKEGKYS
660 670 680 690 700
>>CCDS5060.2 SCML4 gene_id:256380|Hs108|chr6 (414 aa)
initn: 844 init1: 364 opt: 785 Z-score: 532.1 bits: 108.1 E(32554): 2.6e-23
Smith-Waterman score: 1171; 49.3% identity (71.2% similar) in 416 aa overlap (272-660:2-414)
250 260 270 280 290
pF1KB6 PKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKRGR-----TPKTLISHPISAP
: : ::.:::: :: . : . .
CCDS50 MQSQRIPGRKRGRPSLHSTPMKMAVHNLYSA
10 20 30
300 310 320 330 340 350
pF1KB6 SKTAEP-LKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPS-SAM
: . : .:.::::: ::: : : :.:..: :: :::::: :..::::::.:: .:
CCDS50 SAGSLPAVKIPKKRGRKPGYKIKSRVLMTPLALSPPRSTPEPDLSSIPQDAATVPSLAAP
40 50 60 70 80 90
360 370 380 390 400 410
pF1KB6 QAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTVFSF
:: :::.:.::....::.:..:::::::.:::: : :.:::::::::::::..:: :::.
CCDS50 QALTVCLYINKQANAGPYLERKKVQQLPEHFGPERPSAVLQQAVQACIDCAHQQKLVFSL
100 110 120 130 140 150
420 430 440 450 460 470
pF1KB6 LKQGHGGEVIS--AVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFTQTH
.:::.:::..: : :: .:: .::.:::: :::::: :::..: :.::..::: .
CCDS50 VKQGYGGEMVSVSASFDGKQHLRSLPVVNSIGYVLRFLAKLCRSLLCDDLFSHQPFPRGC
160 170 180 190 200 210
480 490 500 510 520
pF1KB6 LSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD-SAS--------NPTNLVSTS
. .. . . :. .: . . :. . . :.: ::: .:.. . .
CCDS50 SASEKVQ-EKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSASTFNHRGSLHPSSSLYCK
220 230 240 250 260 270
530 540 550 560 570
pF1KB6 QRHRPLLSSCGLPPSTASAVRR--LCSRGV----LK--GSNERRDMESFWKLNRSPGSDR
... : : .::.. : . : : :. .:. .:. :. . :: .:
CCDS50 RQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRNTTSL-EGNRCASSPS
280 290 300 310 320
580 590 600 610 620 630
pF1KB6 YLESRDASRLSGRDPSSWTVEDVMQFVREADPQ-LGPHADLFRKHEIDGKALLLLRSDMM
...:: : .:.::.::::::. ::..:::: ::::..:::::::::.:::::.:::.
CCDS50 Q-DAQDARRPRSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMV
330 340 350 360 370 380
640 650 660
pF1KB6 MKYMGLKLGPALKLSYHIDRLKQGKF
:::.:::::::::: ::::.:::.::
CCDS50 MKYLGLKLGPALKLCYHIDKLKQAKF
390 400 410
>>CCDS69163.1 SCML4 gene_id:256380|Hs108|chr6 (356 aa)
initn: 770 init1: 364 opt: 648 Z-score: 443.4 bits: 91.5 E(32554): 2.2e-18
Smith-Waterman score: 1034; 49.9% identity (73.0% similar) in 359 aa overlap (323-660:1-356)
300 310 320 330 340 350
pF1KB6 ISAPSKTAEPLKFPKKRGPKPGSKRKPRTLLNPPPASPTTSTPEPDTSTVPQDAATIPS-
..: :: :::::: :..::::::.::
CCDS69 MTPLALSPPRSTPEPDLSSIPQDAATVPSL
10 20 30
360 370 380 390 400 410
pF1KB6 SAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDHFGPARASVVLQQAVQACIDCAYHQKTV
.: :: :::.:.::....::.:..:::::::.:::: : :.:::::::::::::..:: :
CCDS69 AAPQALTVCLYINKQANAGPYLERKKVQQLPEHFGPERPSAVLQQAVQACIDCAHQQKLV
40 50 60 70 80 90
420 430 440 450 460
pF1KB6 FSFLKQGHGGEVIS--AVFDREQHTLNLPAVNSITYVLRFLEKLCHNLRSDNLFGNQPFT
::..:::.:::..: : :: .:: .::.:::: :::::: :::..: :.::..:::
CCDS69 FSLVKQGYGGEMVSVSASFDGKQHLRSLPVVNSIGYVLRFLAKLCRSLLCDDLFSHQPFP
100 110 120 130 140 150
470 480 490 500 510 520
pF1KB6 QTHLSLTAIEYSHSHDRYLPGETFVLGNSLARSLEPHSDSMD-SAS--------NPTNLV
. . .. . . :. .: . . :. . . :.: ::: .:.. .
CCDS69 RGCSASEKVQ-EKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSASTFNHRGSLHPSSSL
160 170 180 190 200
530 540 550 560 570
pF1KB6 STSQRHRPLLSSCGLPPSTASAVRR--LCSRGV----LK--GSNERRDMESFWKLNRSPG
.... : : .::.. : . : : :. .:. .:. :. . :: .
CCDS69 YCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRNTTSL-EGNRCAS
210 220 230 240 250 260
580 590 600 610 620 630
pF1KB6 SDRYLESRDASRLSGRDPSSWTVEDVMQFVREADPQ-LGPHADLFRKHEIDGKALLLLRS
: ...:: : .:.::.::::::. ::..:::: ::::..:::::::::.:::::.:
CCDS69 SPSQ-DAQDARRPRSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKS
270 280 290 300 310 320
640 650 660
pF1KB6 DMMMKYMGLKLGPALKLSYHIDRLKQGKF
::.:::.:::::::::: ::::.:::.::
CCDS69 DMVMKYLGLKLGPALKLCYHIDKLKQAKF
330 340 350
>>CCDS13319.1 L3MBTL1 gene_id:26013|Hs108|chr20 (772 aa)
initn: 586 init1: 297 opt: 584 Z-score: 397.0 bits: 84.0 E(32554): 8.6e-16
Smith-Waterman score: 584; 41.1% identity (64.7% similar) in 224 aa overlap (14-235:192-413)
10 20 30 40
pF1KB6 MLVCYSVLACEILWDLPCSIMGSPLGHFTWDKYLKETCSVPAP
:. : ..:..::.: .. ::
CCDS13 EESEPEAMEKQEEGKDPEGQPTASTPESEEWSSSQPATGEKKECWSWESYLEEQKAITAP
170 180 190 200 210 220
50 60 70 80 90 100
pF1KB6 VHCFK--QSYTPPSNEFKISMKLEAQDPRNTTSTCIATVVGLTGARLRLRLDGSDNKNDF
: :. :. : .: ::..::::. ::.. . : ::. . : ::::..:: .. .::
CCDS13 VSLFQDSQAVTHNKNGFKLGMKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDF
230 240 250 260 270 280
110 120 130 140 150 160
pF1KB6 WRLVDSAEIQPIGNCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPIRIFHKEPPS
: ..: .:.: : ::.: :::: :.. . :: ..: .: :. :: ..: .. :
CCDS13 WVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWSQYLRSTR--AQAAPKHLFVSQSHS
290 300 310 320 330
170 180 190 200 210 220
pF1KB6 PSHNFFKMGMKLEAVDRKNPHFICPATIGEVRGSEVLVTFDGWRGAFDYWCRFDSRDIFP
: :..::::::::: :: ..: :.. .: :. :: ::.: ..:::: .: : :
CCDS13 PPPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHP
340 350 360 370 380 390
230 240 250 260 270 280
pF1KB6 VGWCSLTGDNLQPPGTKVVIPKNPYPASDVNTEKPSIHSSTKTVLEHQPGQRGRKPGKKR
::::. : : ::
CCDS13 VGWCQKQGKPLTPPQDYPDPDNFCWEKYLEETGASAVPTWAFKVRPPHSFLVNMKLEAVD
400 410 420 430 440 450
660 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:44:20 2016 done: Sat Nov 5 13:44:20 2016
Total Scan time: 3.740 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]