FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6130, 141 aa 1>>>pF1KE6130 141 - 141 aa - 141 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8932+/-0.000749; mu= 8.2138+/- 0.045 mean_var=60.8546+/-12.582, 0's: 0 Z-trim(108.1): 16 B-trim: 0 in 0/49 Lambda= 0.164410 statistics sampled from 9966 (9977) to 9966 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.306), width: 16 Scan time: 1.500 The best scores are: opt bits E(32554) CCDS81694.1 ATP5G2 gene_id:517|Hs108|chr12 ( 141) 868 213.8 2.8e-56 CCDS31812.1 ATP5G2 gene_id:517|Hs108|chr12 ( 157) 868 213.8 3.1e-56 CCDS8863.2 ATP5G2 gene_id:517|Hs108|chr12 ( 198) 868 213.9 3.8e-56 CCDS2263.1 ATP5G3 gene_id:518|Hs108|chr2 ( 142) 638 159.3 7.3e-40 CCDS11539.1 ATP5G1 gene_id:516|Hs108|chr17 ( 136) 567 142.4 8.3e-35 >>CCDS81694.1 ATP5G2 gene_id:517|Hs108|chr12 (141 aa) initn: 868 init1: 868 opt: 868 Z-score: 1124.0 bits: 213.8 E(32554): 2.8e-56 Smith-Waterman score: 868; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141) 10 20 30 40 50 60 pF1KE6 MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 70 80 90 100 110 120 130 140 pF1KE6 ALSEAMGLFCLMVAFLILFAM ::::::::::::::::::::: CCDS81 ALSEAMGLFCLMVAFLILFAM 130 140 >>CCDS31812.1 ATP5G2 gene_id:517|Hs108|chr12 (157 aa) initn: 868 init1: 868 opt: 868 Z-score: 1123.2 bits: 213.8 E(32554): 3.1e-56 Smith-Waterman score: 868; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:17-157) 10 20 30 40 pF1KE6 MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSL :::::::::::::::::::::::::::::::::::::::::::: CCDS31 MPELILSPATAPHPLKMFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 AVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 70 80 90 100 110 120 110 120 130 140 pF1KE6 NPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM ::::::::::::::::::::::::::::::::::::: CCDS31 NPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM 130 140 150 >>CCDS8863.2 ATP5G2 gene_id:517|Hs108|chr12 (198 aa) initn: 868 init1: 868 opt: 868 Z-score: 1121.4 bits: 213.9 E(32554): 3.8e-56 Smith-Waterman score: 868; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:58-198) 10 20 30 pF1KE6 MFACSKFVSTPSLVKSTSQLLSRPLSAVVL :::::::::::::::::::::::::::::: CCDS88 PSFRSSRCSAPLCLLCSGSSSPATAPHPLKMFACSKFVSTPSLVKSTSQLLSRPLSAVVL 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE6 KRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 KRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAG 90 100 110 120 130 140 100 110 120 130 140 pF1KE6 IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM 150 160 170 180 190 >>CCDS2263.1 ATP5G3 gene_id:518|Hs108|chr2 (142 aa) initn: 645 init1: 525 opt: 638 Z-score: 829.1 bits: 159.3 E(32554): 7.3e-40 Smith-Waterman score: 638; 74.6% identity (86.6% similar) in 142 aa overlap (1-141:1-142) 10 20 30 40 50 pF1KE6 MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEIL-TDESLSSLAVSCPLTSLVSSRSF ::::.:.. ::::... :.. ::.:: ::.::: : :. . . . .: . .: : CCDS22 MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 70 80 90 100 110 120 120 130 140 pF1KE6 FALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::: CCDS22 FALSEAMGLFCLMVAFLILFAM 130 140 >>CCDS11539.1 ATP5G1 gene_id:516|Hs108|chr17 (136 aa) initn: 548 init1: 523 opt: 567 Z-score: 738.4 bits: 142.4 E(32554): 8.3e-35 Smith-Waterman score: 567; 71.9% identity (83.0% similar) in 135 aa overlap (7-141:8-136) 10 20 30 40 50 pF1KE6 MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSF :.: :.:.. .. : ::.:: :. : .. : . . :: :. : : CCDS11 MQTAGALFIS-PALIRCCTRGLIRPVSASFLNSP---VNSSKQPSYSNFPLQ--VARREF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG :::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 60 70 80 90 100 110 120 130 140 pF1KE6 FALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::: CCDS11 FALSEAMGLFCLMVAFLILFAM 120 130 141 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:43:06 2016 done: Tue Nov 8 09:43:07 2016 Total Scan time: 1.500 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]