FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6218, 290 aa 1>>>pF1KE6218 290 - 290 aa - 290 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0622+/-0.000389; mu= 16.9789+/- 0.024 mean_var=66.5217+/-13.162, 0's: 0 Z-trim(111.7): 25 B-trim: 0 in 0/53 Lambda= 0.157251 statistics sampled from 20382 (20400) to 20382 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.609), E-opt: 0.2 (0.239), width: 16 Scan time: 4.610 The best scores are: opt bits E(85289) XP_005266023 (OMIM: 601287,601411,606685) PREDICTE ( 290) 1891 437.9 1.1e-122 NP_000328 (OMIM: 601287,601411,606685) delta-sarco ( 290) 1891 437.9 1.1e-122 XP_016865212 (OMIM: 601287,601411,606685) PREDICTE ( 290) 1891 437.9 1.1e-122 XP_016865213 (OMIM: 601287,601411,606685) PREDICTE ( 290) 1891 437.9 1.1e-122 XP_011532923 (OMIM: 601287,601411,606685) PREDICTE ( 289) 1884 436.3 3.3e-122 NP_001121681 (OMIM: 601287,601411,606685) delta-sa ( 289) 1884 436.3 3.3e-122 NP_758447 (OMIM: 601287,601411,606685) delta-sarco ( 256) 1512 351.9 7.5e-97 NP_631906 (OMIM: 608113) zeta-sarcoglycan isoform ( 312) 1144 268.4 1.2e-71 XP_005266024 (OMIM: 601287,601411,606685) PREDICTE ( 175) 1088 255.6 5e-68 NP_000222 (OMIM: 253700,608896) gamma-sarcoglycan ( 291) 1031 242.8 5.9e-64 XP_005266562 (OMIM: 253700,608896) PREDICTED: gamm ( 291) 1029 242.3 8.1e-64 XP_006719924 (OMIM: 253700,608896) PREDICTED: gamm ( 309) 1029 242.4 8.5e-64 NP_001309808 (OMIM: 608113) zeta-sarcoglycan isofo ( 278) 692 165.9 8e-41 NP_001309809 (OMIM: 608113) zeta-sarcoglycan isofo ( 271) 527 128.4 1.5e-29 NP_001309810 (OMIM: 608113) zeta-sarcoglycan isofo ( 197) 504 123.1 4.2e-28 NP_000223 (OMIM: 600900,604286) beta-sarcoglycan [ ( 318) 198 53.8 4.9e-07 >>XP_005266023 (OMIM: 601287,601411,606685) PREDICTED: d (290 aa) initn: 1891 init1: 1891 opt: 1891 Z-score: 2323.7 bits: 437.9 E(85289): 1.1e-122 Smith-Waterman score: 1891; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL :::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 250 260 270 280 290 >>NP_000328 (OMIM: 601287,601411,606685) delta-sarcoglyc (290 aa) initn: 1891 init1: 1891 opt: 1891 Z-score: 2323.7 bits: 437.9 E(85289): 1.1e-122 Smith-Waterman score: 1891; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL :::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 250 260 270 280 290 >>XP_016865212 (OMIM: 601287,601411,606685) PREDICTED: d (290 aa) initn: 1891 init1: 1891 opt: 1891 Z-score: 2323.7 bits: 437.9 E(85289): 1.1e-122 Smith-Waterman score: 1891; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 250 260 270 280 290 >>XP_016865213 (OMIM: 601287,601411,606685) PREDICTED: d (290 aa) initn: 1891 init1: 1891 opt: 1891 Z-score: 2323.7 bits: 437.9 E(85289): 1.1e-122 Smith-Waterman score: 1891; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 250 260 270 280 290 >>XP_011532923 (OMIM: 601287,601411,606685) PREDICTED: d (289 aa) initn: 1884 init1: 1884 opt: 1884 Z-score: 2315.1 bits: 436.3 E(85289): 3.3e-122 Smith-Waterman score: 1884; 100.0% identity (100.0% similar) in 289 aa overlap (2-290:1-289) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK 180 190 200 210 220 230 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL :::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 240 250 260 270 280 >>NP_001121681 (OMIM: 601287,601411,606685) delta-sarcog (289 aa) initn: 1884 init1: 1884 opt: 1884 Z-score: 2315.1 bits: 436.3 E(85289): 3.3e-122 Smith-Waterman score: 1884; 100.0% identity (100.0% similar) in 289 aa overlap (2-290:1-289) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK 180 190 200 210 220 230 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL 240 250 260 270 280 >>NP_758447 (OMIM: 601287,601411,606685) delta-sarcoglyc (256 aa) initn: 1532 init1: 1512 opt: 1512 Z-score: 1859.7 bits: 351.9 E(85289): 7.5e-97 Smith-Waterman score: 1512; 99.1% identity (100.0% similar) in 235 aa overlap (1-235:1-235) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_758 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_758 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_758 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::.. NP_758 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEVRDEKDR 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 IRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL NP_758 SSKSYSFNRPTLPITG 250 >>NP_631906 (OMIM: 608113) zeta-sarcoglycan isoform 1 [H (312 aa) initn: 940 init1: 524 opt: 1144 Z-score: 1407.3 bits: 268.4 E(85289): 1.2e-71 Smith-Waterman score: 1144; 57.2% identity (82.8% similar) in 297 aa overlap (2-290:14-310) 10 20 30 40 pF1KE6 MMPQEQY--THHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILI : .::: . .....: . . :.: ::::::::::::::::::.. . NP_631 MDRSTNLDIEELKMTREQYILATQQNNLPRTENAQLYPVGIYGWRKRCLYFFVLLLLVTM 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 LVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKS .::::::::::::::::.:::::::.:.::..::: :::: :::.:::.:: . : ..: NP_631 IVNLAMTIWILKVMNFTVDGMGNLRVTKKGIRLEGISEFLLPLYVKEIHSRKDSPLVLQS 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 ARNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVK-TVSGKLLFSADNNEVVVGAERLR :::::: : . .. :: : :::: :.:::. . .:..:::::..:...:::.:. NP_631 DRNVTVNARNHMGQLTGQLTIGADAVEAQCKRFEVRASEDGRVLFSADEDEITIGAEKLK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE6 VLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTEL : :.::.:: .:.:::..::.: ..::::::::::.::::.::...: ::...:::: :: NP_631 VTGTEGAVFGHSVETPHIRAEPSQDLRLESPTRSLIMEAPRGVQVSAAAGDFKATCRKEL 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE6 RLESKDGEIKLDAAKIRLPRLPHGSYT---PTGT--RQKVFEICVCANGRLFLSQAGAGS .:.: .::: :.: :.: :: ::.. :... :: :.:.::: ::.:.:: ::.:: NP_631 HLQSTEGEIFLNAETIKLGNLPTGSFSSSSPSSSSSRQTVYELCVCPNGKLYLSPAGVGS 250 260 270 280 290 300 290 pF1KE6 TCQINTSVCL ::: ....:: NP_631 TCQSSSNICLWS 310 >>XP_005266024 (OMIM: 601287,601411,606685) PREDICTED: d (175 aa) initn: 1088 init1: 1088 opt: 1088 Z-score: 1342.3 bits: 255.6 E(85289): 5e-68 Smith-Waterman score: 1088; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168) 10 20 30 40 50 60 pF1KE6 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MMPQEQYTHHRSTMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSIET :::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGWSPQPGL 130 140 150 160 170 190 200 210 220 230 240 pF1KE6 PNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAK >>NP_000222 (OMIM: 253700,608896) gamma-sarcoglycan [Hom (291 aa) initn: 1029 init1: 1029 opt: 1031 Z-score: 1269.2 bits: 242.8 E(85289): 5.9e-64 Smith-Waterman score: 1031; 52.9% identity (81.4% similar) in 291 aa overlap (2-290:1-291) 10 20 30 40 50 pF1KE6 MMPQEQYTHHRS--TMPGSVGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILK : .:::: . . :::.:::::::::::.:::::.:...::::.:::::: NP_000 MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLIILVVNLALTIWILK 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 VMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQ :: :. :::.: .:. ::.:::.:::: :::::::.:: ..: ..:..::::: :.. NP_000 VMWFSPAGMGHLCVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNSE 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 TKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADNNEVVVGAERLRVLGAEGTVFPKSI .: .: .::: ::. ...:.... .:: ::..:..:::::...::: : ::..: .:. NP_000 GEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTDKLRVTGPEGALFEHSV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 ETPNVRADPFKELRLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDA ::: ::::::..:::::::::: :.::.::.:.:.::..:: . .. ..:.:: . ::: NP_000 ETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEALSQMDILFHSSDGMLVLDA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 AKIRLPRLPHGSYTPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL . ::.: .:.. :.:. :...::::: .:.:.:: ::...::: .. .:: NP_000 ETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLYLSVAGVSTTCQEHSHICL 240 250 260 270 280 290 290 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:11:03 2016 done: Tue Nov 8 11:11:04 2016 Total Scan time: 4.610 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]