FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5508, 437 aa 1>>>pF1KE5508 437 - 437 aa - 437 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0132+/-0.0009; mu= 14.3921+/- 0.054 mean_var=87.8625+/-17.307, 0's: 0 Z-trim(108.3): 40 B-trim: 0 in 0/50 Lambda= 0.136827 statistics sampled from 10124 (10152) to 10124 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.312), width: 16 Scan time: 3.270 The best scores are: opt bits E(32554) CCDS11244.1 ERAL1 gene_id:26284|Hs108|chr17 ( 437) 2918 586.0 2.4e-167 >>CCDS11244.1 ERAL1 gene_id:26284|Hs108|chr17 (437 aa) initn: 2918 init1: 2918 opt: 2918 Z-score: 3117.8 bits: 586.0 E(32554): 2.4e-167 Smith-Waterman score: 2918; 100.0% identity (100.0% similar) in 437 aa overlap (1-437:1-437) 10 20 30 40 50 60 pF1KE5 MAAPSWRGARLVQSVLRVWQVGPHVARERVIPFSSLLGFQRRCVSCVAGSAFSGPRLASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MAAPSWRGARLVQSVLRVWQVGPHVARERVIPFSSLLGFQRRCVSCVAGSAFSGPRLASA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SRSNGQGSALDHFLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SRSNGQGSALDHFLGFSQPDSSVTPCVPAVSMNRDEQDVLLVHHPDMPENSRVLRVVLLG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 APNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 APNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 HLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPSVLVMNKVDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 HLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPSVLVMNKVDC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQSVGNPQRIGWP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSPAVKDPNTQSVGNPQRIGWP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 HFKEIFMLSALSQEDVKTLKQYLLTQAQPGPWEYHSAVLTSQTPEEICANIIREKLLEHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 HFKEIFMLSALSQEDVKTLKQYLLTQAQPGPWEYHSAVLTSQTPEEICANIIREKLLEHL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 PQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLM 370 380 390 400 410 420 430 pF1KE5 DIFLCDVDIRLSVKLLK ::::::::::::::::: CCDS11 DIFLCDVDIRLSVKLLK 430 437 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:20:03 2016 done: Tue Nov 8 01:20:04 2016 Total Scan time: 3.270 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]