FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3730, 184 aa 1>>>pF1KE3730 184 - 184 aa - 184 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6977+/-0.000754; mu= 7.8635+/- 0.046 mean_var=114.3746+/-22.165, 0's: 0 Z-trim(111.8): 29 B-trim: 44 in 1/52 Lambda= 0.119925 statistics sampled from 12846 (12872) to 12846 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.385), width: 16 Scan time: 1.060 The best scores are: opt bits E(33420) CCDS55249.1 TPD52 gene_id:7163|Hs109|chr8 ( 184) 1123 204.1 4e-53 CCDS34912.1 TPD52 gene_id:7163|Hs109|chr8 ( 224) 1080 196.8 8.1e-51 CCDS47879.1 TPD52 gene_id:7163|Hs109|chr8 ( 207) 781 145.0 2.8e-35 CCDS75758.1 TPD52 gene_id:7163|Hs109|chr8 ( 233) 744 138.6 2.6e-33 CCDS75759.1 TPD52 gene_id:7163|Hs109|chr8 ( 247) 738 137.6 5.7e-33 CCDS75757.1 TPD52 gene_id:7163|Hs109|chr8 ( 238) 729 136.1 1.6e-32 CCDS75513.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 191) 656 123.4 8.6e-29 CCDS58785.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 163) 559 106.5 8.5e-24 CCDS13541.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 186) 557 106.2 1.2e-23 CCDS34528.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 131) 467 90.6 4.4e-19 CCDS34527.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 144) 467 90.6 4.8e-19 CCDS83122.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 209) 468 90.9 5.7e-19 CCDS5130.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 204) 467 90.7 6.3e-19 CCDS13543.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 209) 459 89.3 1.7e-18 CCDS13545.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 200) 445 86.9 8.7e-18 CCDS75514.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 102) 409 80.4 3.8e-16 CCDS43502.1 TPD52L1 gene_id:7164|Hs109|chr6 ( 175) 409 80.6 5.9e-16 CCDS13540.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 206) 333 67.5 6.1e-12 CCDS13544.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 220) 333 67.5 6.4e-12 CCDS74752.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 222) 333 67.5 6.5e-12 CCDS13542.1 TPD52L2 gene_id:7165|Hs109|chr20 ( 229) 333 67.5 6.6e-12 >>CCDS55249.1 TPD52 gene_id:7163|Hs109|chr8 (184 aa) initn: 1123 init1: 1123 opt: 1123 Z-score: 1067.5 bits: 204.1 E(33420): 4e-53 Smith-Waterman score: 1123; 100.0% identity (100.0% similar) in 184 aa overlap (1-184:1-184) 10 20 30 40 50 60 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKT 130 140 150 160 170 180 pF1KE3 QESL :::: CCDS55 QESL >>CCDS34912.1 TPD52 gene_id:7163|Hs109|chr8 (224 aa) initn: 1080 init1: 1080 opt: 1080 Z-score: 1026.0 bits: 196.8 E(33420): 8.1e-51 Smith-Waterman score: 1080; 100.0% identity (100.0% similar) in 178 aa overlap (7-184:47-224) 10 20 30 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQ :::::::::::::::::::::::::::::: CCDS34 DFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQ 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE3 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE3 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGG 140 150 160 170 180 190 160 170 180 pF1KE3 DFGEVLNSAANASATTTEPLPEKTQESL :::::::::::::::::::::::::::: CCDS34 DFGEVLNSAANASATTTEPLPEKTQESL 200 210 220 >>CCDS47879.1 TPD52 gene_id:7163|Hs109|chr8 (207 aa) initn: 781 init1: 781 opt: 781 Z-score: 747.0 bits: 145.0 E(33420): 2.8e-35 Smith-Waterman score: 1067; 88.9% identity (88.9% similar) in 207 aa overlap (1-184:1-207) 10 20 30 40 50 60 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV 70 80 90 100 110 120 130 140 150 pF1KE3 ITKKLEDVK-----------------------NSPTFKSFEEKVENLKSKVGGTKPAGGD ::::::::: :::::::::::::::::::::::::::: CCDS47 ITKKLEDVKLQAFSHSFSIRSIQHSISMPAMRNSPTFKSFEEKVENLKSKVGGTKPAGGD 130 140 150 160 170 180 160 170 180 pF1KE3 FGEVLNSAANASATTTEPLPEKTQESL ::::::::::::::::::::::::::: CCDS47 FGEVLNSAANASATTTEPLPEKTQESL 190 200 >>CCDS75758.1 TPD52 gene_id:7163|Hs109|chr8 (233 aa) initn: 738 init1: 738 opt: 744 Z-score: 711.6 bits: 138.6 E(33420): 2.6e-33 Smith-Waterman score: 1052; 95.2% identity (95.2% similar) in 187 aa overlap (7-184:47-233) 10 20 30 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQ :::::::::::::::::::::::::::::: CCDS75 DFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQ 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE3 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY 80 90 100 110 120 130 100 110 120 130 140 pF1KE3 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVK---------NSPTFKSFEEKVENLKSK ::::::::::::::::::::::::::::::::: :::::::::::::::::: CCDS75 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSFRNSPTFKSFEEKVENLKSK 140 150 160 170 180 190 150 160 170 180 pF1KE3 VGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL ::::::::::::::::::::::::::::::::::::: CCDS75 VGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL 200 210 220 230 >>CCDS75759.1 TPD52 gene_id:7163|Hs109|chr8 (247 aa) initn: 738 init1: 738 opt: 738 Z-score: 705.7 bits: 137.6 E(33420): 5.7e-33 Smith-Waterman score: 1024; 88.6% identity (88.6% similar) in 201 aa overlap (7-184:47-247) 10 20 30 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQ :::::::::::::::::::::::::::::: CCDS75 DFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQ 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE3 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY 80 90 100 110 120 130 100 110 120 130 pF1KE3 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVK-----------------------NSPT ::::::::::::::::::::::::::::::::: :::: CCDS75 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSFSIRSIQHSISMPAMRNSPT 140 150 160 170 180 190 140 150 160 170 180 pF1KE3 FKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 FKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL 200 210 220 230 240 >>CCDS75757.1 TPD52 gene_id:7163|Hs109|chr8 (238 aa) initn: 729 init1: 729 opt: 729 Z-score: 697.5 bits: 136.1 E(33420): 1.6e-32 Smith-Waterman score: 1039; 92.2% identity (92.7% similar) in 192 aa overlap (7-184:47-238) 10 20 30 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQ :::::::::::::::::::::::::::::: CCDS75 DFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQ 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE3 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 EELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAY 80 90 100 110 120 130 100 110 120 130 140 pF1KE3 KKTSETLSQAGQKASAAFSSVGSVITKKLEDV--------------KNSPTFKSFEEKVE :::::::::::::::::::::::::::::::: .::::::::::::: CCDS75 KKTSETLSQAGQKASAAFSSVGSVITKKLEDVNIRSIQHSISMPAMRNSPTFKSFEEKVE 140 150 160 170 180 190 150 160 170 180 pF1KE3 NLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL :::::::::::::::::::::::::::::::::::::::::: CCDS75 NLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKTQESL 200 210 220 230 >>CCDS75513.1 TPD52L1 gene_id:7164|Hs109|chr6 (191 aa) initn: 648 init1: 543 opt: 656 Z-score: 630.6 bits: 123.4 E(33420): 8.6e-29 Smith-Waterman score: 656; 57.0% identity (83.9% similar) in 186 aa overlap (1-182:1-186) 10 20 30 40 50 60 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK :. ::::.:.:. ::..:. . . :::::.:::. ::...:.:: :: :::.:: CCDS75 MEAQAQGLLETEPLQGTDEDAVASADFSSMLSEEEKEELKAELVQLEDEITTLRQVLSAK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV :.::.:::.:::.: ..:::::..:.:.:. .:.::::: ::::.:::::.::::.::.. CCDS75 ERHLVEIKQKLGMNLMNELKQNFSKSWHDMQTTTAYKKTHETLSHAGQKATAAFSNVGTA 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 ITKKLEDVKNSPTFKSFEEKVE----NLKSKVGGTKPAGGDFGEVLNSAANASATTTEPL :.::. :..::::::::::.:: .::.:::::.: ::.: :::.:.:.::: . CCDS75 ISKKFGDMRNSPTFKSFEERVETTVTSLKTKVGGTNPNGGSFEEVLSSTAHASAQSLAGG 130 140 150 160 170 180 180 pF1KE3 PEKTQESL ..:.: CCDS75 SRRTKEEELQC 190 >>CCDS58785.1 TPD52L2 gene_id:7165|Hs109|chr20 (163 aa) initn: 617 init1: 536 opt: 559 Z-score: 540.9 bits: 106.5 E(33420): 8.5e-24 Smith-Waterman score: 559; 56.9% identity (83.8% similar) in 160 aa overlap (18-177:5-162) 10 20 30 40 50 60 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK :. ::: :.: :.: :.:::: ::.:::::: :: :::::: CCDS58 MDSAGQGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAK 10 20 30 40 70 80 90 100 110 120 pF1KE3 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV :.: .:.::.::...: :::::....:.:: ..::::::.:::::::::.:::.:.:::. CCDS58 ERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSA 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 ITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKT :..:: :..:: ::::::..: ..:::: : . :.: .. .::.... ..: : CCDS58 ISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGDKPLSDPAPF 110 120 130 140 150 160 pF1KE3 QESL >>CCDS13541.1 TPD52L2 gene_id:7165|Hs109|chr20 (186 aa) initn: 597 init1: 536 opt: 557 Z-score: 538.2 bits: 106.2 E(33420): 1.2e-23 Smith-Waterman score: 557; 53.1% identity (80.4% similar) in 179 aa overlap (1-177:10-185) 10 20 30 40 pF1KE3 MDRGEQGLLRTDPVPEEGED--VAATISATETLSEEEQEELRRELAKVEEE .. ..::: .: . . : ::: :.: :.: :.:::: ::.::::: CCDS13 MDSAGQDINLNSPNKGLL-SDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEE 10 20 30 40 50 50 60 70 80 90 100 pF1KE3 IQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQK : :: :::::::.: .:.::.::...: :::::....:.:: ..::::::.::::::::: CCDS13 IVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQK 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 ASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANAS .:::.:.:::.:..:: :..:: ::::::..: ..:::: : . :.: .. .::.... CCDS13 TSAALSTVGSAISRKLGDMRNSATFKSFEDRVGTIKSKVVGDRENGSD--NLPSSAGSGD 120 130 140 150 160 170 170 180 pF1KE3 ATTTEPLPEKTQESL ..: : CCDS13 KPLSDPAPF 180 >>CCDS34528.1 TPD52L1 gene_id:7164|Hs109|chr6 (131 aa) initn: 482 init1: 463 opt: 467 Z-score: 456.2 bits: 90.6 E(33420): 4.4e-19 Smith-Waterman score: 467; 56.6% identity (86.0% similar) in 129 aa overlap (1-129:1-129) 10 20 30 40 50 60 pF1KE3 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAK :. ::::.:.:. ::..:. . . :::::.:::. ::...:.:: :: :::.:: CCDS34 MEAQAQGLLETEPLQGTDEDAVASADFSSMLSEEEKEELKAELVQLEDEITTLRQVLSAK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSV :.::.:::.:::.: ..:::::..:.:.:. .:.::::: ::::.:::::.::::.::.. CCDS34 ERHLVEIKQKLGMNLMNELKQNFSKSWHDMQTTTAYKKTHETLSHAGQKATAAFSNVGTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGEVLNSAANASATTTEPLPEKT :.::. :.. CCDS34 ISKKFGDMRRK 130 184 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Aug 16 14:36:19 2021 done: Mon Aug 16 14:36:19 2021 Total Scan time: 1.060 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]