FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6328, 440 aa 1>>>pF1KE6328 440 - 440 aa - 440 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.2914+/-0.00134; mu= 7.1268+/- 0.080 mean_var=121.9786+/-25.403, 0's: 0 Z-trim(103.2): 161 B-trim: 21 in 1/50 Lambda= 0.116127 statistics sampled from 7127 (7305) to 7127 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.576), E-opt: 0.2 (0.224), width: 16 Scan time: 2.410 The best scores are: opt bits E(32554) CCDS11265.1 OMG gene_id:4974|Hs108|chr17 ( 440) 2865 491.9 5.2e-139 >>CCDS11265.1 OMG gene_id:4974|Hs108|chr17 (440 aa) initn: 2865 init1: 2865 opt: 2865 Z-score: 2609.1 bits: 491.9 E(32554): 5.2e-139 Smith-Waterman score: 2865; 100.0% identity (100.0% similar) in 440 aa overlap (1-440:1-440) 10 20 30 40 50 60 pF1KE6 MEYQILKMSLCLFILLFLTPGILCICPLQCICTERHRHVDCSGRNLSTLPSGLQENIIHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEYQILKMSLCLFILLFLTPGILCICPLQCICTERHRHVDCSGRNLSTLPSGLQENIIHL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NLSYNHFTDLHNQLTQYTNLRTLDISNNRLESLPAHLPRSLWNMSAANNNIKLLDKSDTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NLSYNHFTDLHNQLTQYTNLRTLDISNNRLESLPAHLPRSLWNMSAANNNIKLLDKSDTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 YQWNLKYLDVSKNMLEKVVLIKNTLRSLEVLNLSSNKLWTVPTNMPSKLHIVDLSNNSLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 YQWNLKYLDVSKNMLEKVVLIKNTLRSLEVLNLSSNKLWTVPTNMPSKLHIVDLSNNSLT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 QILPGTLINLTNLTHLYLHNNKFTFIPDQSFDQLFQLQEITLYNNRWSCDHKQNITYLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QILPGTLINLTNLTHLYLHNNKFTFIPDQSFDQLFQLQEITLYNNRWSCDHKQNITYLLK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 WMMETKAHVIGTPCSTQISSLKEHNMYPTPSGFTSSLFTVSGMQTVDTINSLSVVTQPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 WMMETKAHVIGTPCSTQISSLKEHNMYPTPSGFTSSLFTVSGMQTVDTINSLSVVTQPKV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 TKIPKQYRTKETTFGATLSKDTTFTSTDKAFVPYPEDTSTETINSHEAAAATLTIHLQDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TKIPKQYRTKETTFGATLSKDTTFTSTDKAFVPYPEDTSTETINSHEAAAATLTIHLQDG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 MVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNVKTPLPSVAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MVTNTSLTSSTKSSPTPMTLSITSGMPNNFSEMPQQSTTLNLWREETTTNVKTPLPSVAN 370 380 390 400 410 420 430 440 pF1KE6 AWKVNASFLLLLNVVVMLAV :::::::::::::::::::: CCDS11 AWKVNASFLLLLNVVVMLAV 430 440 440 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:09:11 2016 done: Tue Nov 8 12:09:11 2016 Total Scan time: 2.410 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]