FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7594, 291 aa 1>>>pF1KB7594 291 - 291 aa - 291 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8490+/-0.000352; mu= 2.6776+/- 0.022 mean_var=299.4235+/-59.327, 0's: 0 Z-trim(124.1): 192 B-trim: 0 in 0/60 Lambda= 0.074119 statistics sampled from 45031 (45264) to 45031 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.818), E-opt: 0.2 (0.531), width: 16 Scan time: 8.930 The best scores are: opt bits E(85289) NP_066305 (OMIM: 604640) T-cell leukemia homeobox ( 291) 1984 224.6 1.8e-58 XP_011538046 (OMIM: 186770) PREDICTED: T-cell leuk ( 342) 1156 136.2 8.8e-32 NP_057254 (OMIM: 604240) T-cell leukemia homeobox ( 284) 1016 121.1 2.5e-27 NP_005512 (OMIM: 186770) T-cell leukemia homeobox ( 330) 852 103.6 5.2e-22 XP_011538047 (OMIM: 186770) PREDICTED: T-cell leuk ( 269) 816 99.7 6.6e-21 NP_001182446 (OMIM: 186770) T-cell leukemia homeob ( 257) 512 67.1 3.9e-11 NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 ( 367) 348 49.8 9.4e-06 NP_004089 (OMIM: 269160,600035) homeobox protein E ( 252) 315 46.1 8.4e-05 NP_005510 (OMIM: 600647) homeobox protein HMX2 [Ho ( 273) 308 45.4 0.00015 XP_005269800 (OMIM: 600647) PREDICTED: homeobox pr ( 273) 308 45.4 0.00015 NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 304 45.0 0.00023 NP_004088 (OMIM: 600034) homeobox protein EMX1 [Ho ( 290) 296 44.1 0.00038 NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 293 43.8 0.00049 NP_002720 (OMIM: 604420) hematopoietically-express ( 270) 285 42.9 0.00082 NP_001099044 (OMIM: 613380) homeobox protein HMX3 ( 357) 284 42.9 0.0011 NP_002136 (OMIM: 142967) homeobox protein Hox-B2 [ ( 356) 276 42.1 0.0019 NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 275 41.9 0.0019 XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 42.3 0.002 NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 277 42.3 0.002 NP_001795 (OMIM: 600746) homeobox protein CDX-1 [H ( 265) 270 41.3 0.0025 NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 271 41.5 0.0027 NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 267 40.9 0.003 NP_006553 (OMIM: 604255) transcription factor LBX1 ( 281) 266 40.9 0.0034 NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 266 41.0 0.0038 XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 265 41.0 0.005 NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 265 41.0 0.005 NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 265 41.0 0.005 XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 265 41.0 0.005 XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 265 41.0 0.005 XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 265 41.0 0.005 XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 265 41.0 0.005 NP_064447 (OMIM: 605212) barH-like 2 homeobox prot ( 387) 261 40.5 0.0061 NP_001243268 (OMIM: 602041) homeobox protein Nkx-3 ( 159) 253 39.2 0.0062 NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 260 40.4 0.0064 NP_796374 (OMIM: 605955) homeobox protein Nkx-6.2 ( 277) 257 39.9 0.0066 NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 260 40.4 0.0068 NP_078777 (OMIM: 142987) homeobox protein Hox-D1 [ ( 328) 256 39.9 0.008 NP_006158 (OMIM: 602041) homeobox protein Nkx-3.1 ( 234) 253 39.4 0.008 XP_016872278 (OMIM: 605955) PREDICTED: homeobox pr ( 277) 252 39.4 0.0096 NP_001269359 (OMIM: 607164) transcription factor L ( 198) 249 38.9 0.0096 >>NP_066305 (OMIM: 604640) T-cell leukemia homeobox prot (291 aa) initn: 1984 init1: 1984 opt: 1984 Z-score: 1170.9 bits: 224.6 E(85289): 1.8e-58 Smith-Waterman score: 1984; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 pF1KB7 MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRPGATYPSLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRPGATYPSLP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 ASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 ASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 GGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 GGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 LEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 LEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLM 190 200 210 220 230 240 250 260 270 280 290 pF1KB7 LQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 LQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV 250 260 270 280 290 >>XP_011538046 (OMIM: 186770) PREDICTED: T-cell leukemia (342 aa) initn: 1180 init1: 856 opt: 1156 Z-score: 691.6 bits: 136.2 E(85289): 8.8e-32 Smith-Waterman score: 1203; 62.6% identity (76.4% similar) in 326 aa overlap (15-290:16-337) 10 20 30 40 pF1KB7 MEAPASAQTPHPHEPISFGIDQILNSPDQDS--APAPRGPDGA-----------SYLGG ::::::::::::::: . .:: : :: .: :: XP_011 MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG 10 20 30 40 50 60 50 60 70 80 pF1KB7 PPGGRPGA----TY----PSLPASFAGLGA-----PFEDAGSYSVNLSLA--P------- .. :: .: :. :.. :: :. :. .:::.::..:: : XP_011 GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPL--TGSYNVNMALAGGPGPGGGGG 70 80 90 100 110 90 100 110 120 pF1KB7 ----------AGVIRVPAHRPLPGAV--PPPLPSALPAMPSVPT---VSSLGGLNFPWME :::::::::::: ::: : :: ..::..::::. :..: ::.::::: XP_011 SSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWME 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 SSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQK :.::..:::::. ::.:::::::::::::::::::.:::::::.:.::::::::::::: XP_011 SNRRYTKDRFTV--ALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQK 180 190 200 210 220 230 190 200 210 220 230 240 pF1KB7 YLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQ ::::::::::::.::::::::::::::::::::::::::::::::::.:..::::..::: XP_011 YLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQ 240 250 260 270 280 290 250 260 270 280 290 pF1KB7 KSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV ::: . . ::::.:::::::::::::: .::.:. .:::. XP_011 KSLAQPLPADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVASACE 300 310 320 330 340 >>NP_057254 (OMIM: 604240) T-cell leukemia homeobox prot (284 aa) initn: 1063 init1: 770 opt: 1016 Z-score: 611.7 bits: 121.1 E(85289): 2.5e-27 Smith-Waterman score: 1102; 64.1% identity (80.1% similar) in 287 aa overlap (10-290:12-280) 10 20 30 40 50 pF1KB7 MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPAP--RGPDGASYLGGPPGGRPGATY :: ::::::::::::..:. .. :: .: . :. :: ::. NP_057 MEPGMLGPHNLPH-HEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASG 10 20 30 40 50 60 70 80 90 100 110 pF1KB7 PSLPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPT . :: : ::. :: .:. :.:::::::::::: :::: .: ::.:. :. NP_057 YG-PA---GSLAPL--PGSSGVG----PGGVIRVPAHRPLP--VPPPAGGA-PAVPG-PS 60 70 80 90 100 120 130 140 150 160 170 pF1KB7 ----VSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTS ...:.::.::::.:.:::.:::.::: :.::. :::::::::::::::::::::: NP_057 GLGGAGGLAGLTFPWMDSGRRFAKDRLTAA--LSPFSGTRRIGHPYQNRTPPKRKKPRTS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KB7 FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAE ::: :. :::.:: :::::::::::::::.:.:::::::::::::::::::::::::::: NP_057 FSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAE 170 180 190 200 210 220 240 250 260 270 280 290 pF1KB7 RQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV :..:.::.:.::.::. . : . :::::::::::::::::::: ::. :: .:..: NP_057 RHRAGRLLLHLQQDALPRPLRPPLPPDPLCLHNSSLFALQNLQPWAEDN-KVASVSGLAS 230 240 250 260 270 280 NP_057 VV >>NP_005512 (OMIM: 186770) T-cell leukemia homeobox prot (330 aa) initn: 1111 init1: 792 opt: 852 Z-score: 516.1 bits: 103.6 E(85289): 5.2e-22 Smith-Waterman score: 1127; 59.6% identity (71.7% similar) in 332 aa overlap (11-290:10-325) 10 20 30 40 pF1KB7 MEAPASAQTPHP-H-EPISFGIDQILNSPDQDS--APAPRGPDGASYLG----------- :: : :::::::::::::::: . .:: : :: :: NP_005 MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGG 10 20 30 40 50 50 60 70 80 pF1KB7 -------GPPG-GRPGATYPSLPASFAGLGA-----PFEDAGSYSVNLSLA--P------ : : : :. :. :.. :: :. :. .:::.::..:: : NP_005 GGSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPL--TGSYNVNMALAGGPGPGGGG 60 70 80 90 100 110 90 100 110 120 pF1KB7 -----------AGVIRVPAHRPLPGAV--PPPLPSALPAMPSVPT---VSSLGGLNFPWM :::::::::::: ::: : :: ..::..::::. :..: ::.:::: NP_005 GSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWM 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 ESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQ ::.::..::::: :::::::::::.:::::::.:.:::::::::::: NP_005 ESNRRYTKDRFT--------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQ 180 190 200 210 220 190 200 210 220 230 240 pF1KB7 KYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAF :::::::::::::.::::::::::::::::::::::::::::::::::.:..::::..:: NP_005 KYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAF 230 240 250 260 270 280 250 260 270 280 290 pF1KB7 QKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV :::: . . ::::.:::::::::::::: .::.:. .:::. NP_005 QKSLAQPLPADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVASACE 290 300 310 320 330 >>XP_011538047 (OMIM: 186770) PREDICTED: T-cell leukemia (269 aa) initn: 831 init1: 516 opt: 816 Z-score: 496.4 bits: 99.7 E(85289): 6.6e-21 Smith-Waterman score: 863; 60.1% identity (72.5% similar) in 258 aa overlap (15-222:16-269) 10 20 30 40 pF1KB7 MEAPASAQTPHPHEPISFGIDQILNSPDQDS--APAPRGPDGA-----------SYLGG ::::::::::::::: . .:: : :: .: :: XP_011 MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG 10 20 30 40 50 60 50 60 70 80 pF1KB7 PPGGRPGA----TY----PSLPASFAGLGA-----PFEDAGSYSVNLSLA--P------- .. :: .: :. :.. :: :. :. .:::.::..:: : XP_011 GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPL--TGSYNVNMALAGGPGPGGGGG 70 80 90 100 110 90 100 110 120 pF1KB7 ----------AGVIRVPAHRPLPGAV--PPPLPSALPAMPSVPT---VSSLGGLNFPWME :::::::::::: ::: : :: ..::..::::. :..: ::.::::: XP_011 SSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWME 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 SSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQK :.::..:::::.: :.:::::::::::::::::::.:::::::.:.::::::::::::: XP_011 SNRRYTKDRFTVA--LSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQK 180 190 200 210 220 230 190 200 210 220 230 240 pF1KB7 YLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAFQ ::::::::::::.:::::::::::::::::::: XP_011 YLASAERAALAKALKMTDAQVKTWFQNRRTKWR 240 250 260 250 260 270 280 290 pF1KB7 KSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV >>NP_001182446 (OMIM: 186770) T-cell leukemia homeobox p (257 aa) initn: 687 init1: 460 opt: 512 Z-score: 320.9 bits: 67.1 E(85289): 3.9e-11 Smith-Waterman score: 787; 56.4% identity (67.8% similar) in 264 aa overlap (11-222:10-257) 10 20 30 40 pF1KB7 MEAPASAQTPHP-H-EPISFGIDQILNSPDQDS--APAPRGPDGA-----------SYLG :: : :::::::::::::::: . .:: : :: .: : NP_001 MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGG 10 20 30 40 50 50 60 70 80 pF1KB7 GPPGGRPGA----TY----PSLPASFAGLGA-----PFEDAGSYSVNLSLA--P------ : .. :: .: :. :.. :: :. :. .:::.::..:: : NP_001 GGSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPL--TGSYNVNMALAGGPGPGGGG 60 70 80 90 100 110 90 100 110 120 pF1KB7 -----------AGVIRVPAHRPLPGAV--PPPLPSALPAMPSVPT---VSSLGGLNFPWM :::::::::::: ::: : :: ..::..::::. :..: ::.:::: NP_001 GSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWM 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 ESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQ ::.::..::::: :::::::::::.:::::::.:.:::::::::::: NP_001 ESNRRYTKDRFT--------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQ 180 190 200 210 220 190 200 210 220 230 240 pF1KB7 KYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLMLQLQHDAF :::::::::::::.:::::::::::::::::::: NP_001 KYLASAERAALAKALKMTDAQVKTWFQNRRTKWR 230 240 250 250 260 270 280 290 pF1KB7 QKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV >>NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 [Hom (367 aa) initn: 376 init1: 254 opt: 348 Z-score: 224.3 bits: 49.8 E(85289): 9.4e-06 Smith-Waterman score: 358; 34.2% identity (56.7% similar) in 263 aa overlap (6-259:91-333) 10 20 30 pF1KB7 MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPAP :: ::: ::..::. : : :. NP_006 SPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPH-------GINDILSRP---SMPVA 70 80 90 100 110 40 50 60 70 80 90 pF1KB7 RGPDGASYLGGPPGGRPGATYPSLPASFAGLGAPFEDAGSYSVNLSLAPAGVIR-VPAHR .::. .. :.: ... : :: :. .: :.. .. . .:::.. .: NP_006 ---SGAALPSASPSGSSSSSSSSASASSASAAAA---AAAAAAAAASSPAGLLAGLPRFS 120 130 140 150 160 100 110 120 130 140 150 pF1KB7 PLPGAVPPPLPSALPAMPSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRI : ::: : .: ::. .:...: : : : . . .. :. .: NP_006 SLS---PPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGR-TPIFWPGVMQSPPWRDARLA 170 180 190 200 210 220 160 170 180 190 200 210 pF1KB7 GHPYQNRT----PPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQV :.:. :::. : .:: :: ::: :.. ::::. ::: :: :: ::..:: NP_006 CTPHQGSILLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQV 230 240 250 260 270 280 220 230 240 250 260 pF1KB7 KTWFQNRRTKWRRQ-TAEEREAERQQAS---RLMLQLQHDAFQKSLNDSIQPDPLCLHNS :.::::::::::.. .:: :...: : :: ... . . : ..:. NP_006 KVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKIT 290 300 310 320 330 340 270 280 290 pF1KB7 SLFALQNLQPWEEDSSKVPAVTSLV NP_006 QLLKKHKSSSGGGGGLLLHASEPESSS 350 360 >>NP_004089 (OMIM: 269160,600035) homeobox protein EMX2 (252 aa) initn: 287 init1: 235 opt: 315 Z-score: 207.2 bits: 46.1 E(85289): 8.4e-05 Smith-Waterman score: 315; 31.5% identity (56.7% similar) in 238 aa overlap (10-238:4-226) 10 20 30 40 50 pF1KB7 MEAPASAQTPHPHEPISFGIDQIL--NSPDQDS-APAPRGPDGASYLGGPPGGRPGATYP : :.. : :.... .:: : . : : . :: .. : . . NP_004 MFQPAPKR--CFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFH 10 20 30 40 50 60 70 80 90 100 110 pF1KB7 SLPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPP------PLPSALPAM : :. :: :. . .. .: : . ::.: :.: :: ::::. NP_004 SAAAAAAGRGVYSNPDLVFAEAVSHPPNPA--VPVH-PVP---PPHALAAHPLPSSHSPH 60 70 80 90 100 120 130 140 150 160 170 pF1KB7 PSVPTVSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRT : . . . .::. :.. :: . . .: . . : : : :. :: NP_004 PLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDT-SPESF---LLHNALARKP---KRIRT 110 120 130 140 150 180 190 200 210 220 230 pF1KB7 SFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREA .:: :. .::. :....:...::: ::.::..:..:::.::::::::..:: ::. . NP_004 AFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGS 160 170 180 190 200 210 240 250 260 270 280 290 pF1KB7 ERQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV . :: .. NP_004 DSQQKKKGTHHINRWRIATKQASPEEIDVTSDD 220 230 240 250 >>NP_005510 (OMIM: 600647) homeobox protein HMX2 [Homo s (273 aa) initn: 294 init1: 266 opt: 308 Z-score: 202.7 bits: 45.4 E(85289): 0.00015 Smith-Waterman score: 308; 32.8% identity (56.3% similar) in 247 aa overlap (42-271:24-262) 20 30 40 50 60 pF1KB7 PHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRP--GATYPSLPASFAGLGAP : ::: :. : . .:. :.. . NP_005 MGSKEDAGKGCPAAGGVSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEE 10 20 30 40 50 70 80 90 100 110 120 pF1KB7 FEDAGSYSVNLSLAP---AGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSLGGLN-F : .... . : . . : :.: : :.: . :. :. :::. NP_005 EEPDDGWKAPACFCPDQHGPKEQGPKHHP-----PIPFPCL--GTPKGSGGSGPGGLERT 60 70 80 90 100 130 140 150 160 170 180 pF1KB7 PWMESSR---RFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELE :.. :. . :.:. :.. .: . : : . .. .:: :: ::: :. .:: NP_005 PFLSPSHSDFKEEKERLLPAGSPSPGSERPRDGGA-ERQAGAAKKKTRTVFSRSQVYQLE 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB7 KRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQ-QASRLML . : ..::.:.::: ::.::..:..::::::::::.::.:: . : :: . .:: : NP_005 STFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTL 170 180 190 200 210 220 250 260 270 280 290 pF1KB7 QLQHDAFQKS------LNDSIQ-PDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV . .:. : . :. : :: .:.: :: NP_005 VSMPLVFRDSSLLRVPVPRSLAFPAPLYYPGSNLSALPLYNLYNKLDY 230 240 250 260 270 >>XP_005269800 (OMIM: 600647) PREDICTED: homeobox protei (273 aa) initn: 294 init1: 266 opt: 308 Z-score: 202.7 bits: 45.4 E(85289): 0.00015 Smith-Waterman score: 308; 32.8% identity (56.3% similar) in 247 aa overlap (42-271:24-262) 20 30 40 50 60 pF1KB7 PHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRP--GATYPSLPASFAGLGAP : ::: :. : . .:. :.. . XP_005 MGSKEDAGKGCPAAGGVSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEE 10 20 30 40 50 70 80 90 100 110 120 pF1KB7 FEDAGSYSVNLSLAP---AGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSLGGLN-F : .... . : . . : :.: : :.: . :. :. :::. XP_005 EEPDDGWKAPACFCPDQHGPKEQGPKHHP-----PIPFPCL--GTPKGSGGSGPGGLERT 60 70 80 90 100 130 140 150 160 170 180 pF1KB7 PWMESSR---RFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELE :.. :. . :.:. :.. .: . : : . .. .:: :: ::: :. .:: XP_005 PFLSPSHSDFKEEKERLLPAGSPSPGSERPRDGGA-ERQAGAAKKKTRTVFSRSQVYQLE 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB7 KRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQ-QASRLML . : ..::.:.::: ::.::..:..::::::::::.::.:: . : :: . .:: : XP_005 STFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQTL 170 180 190 200 210 220 250 260 270 280 290 pF1KB7 QLQHDAFQKS------LNDSIQ-PDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV . .:. : . :. : :: .:.: :: XP_005 VSMPLVFRDSSLLRVPVPRSLAFPAPLYYPGSNLSALPLYNLYNKLDY 230 240 250 260 270 291 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:03:41 2016 done: Mon Nov 7 01:03:42 2016 Total Scan time: 8.930 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]