FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6330, 390 aa 1>>>pF1KE6330 390 - 390 aa - 390 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.9350+/-0.000353; mu= -3.5290+/- 0.022 mean_var=265.5147+/-56.115, 0's: 0 Z-trim(122.6): 44 B-trim: 1251 in 1/58 Lambda= 0.078710 statistics sampled from 40932 (40992) to 40932 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.481), width: 16 Scan time: 7.590 The best scores are: opt bits E(85289) NP_620411 (OMIM: 614281) endothelial cell-selectiv ( 390) 2596 307.6 3.4e-83 XP_011541362 (OMIM: 614281) PREDICTED: endothelial ( 287) 1910 229.6 7.5e-60 XP_005271777 (OMIM: 614281) PREDICTED: endothelial ( 211) 1236 152.9 6.4e-37 NP_055127 (OMIM: 606011) V-set and immunoglobulin ( 327) 422 60.6 6.1e-09 NP_079045 (OMIM: 611693,615237) CXADR-like membran ( 373) 403 58.5 3e-08 NP_001015887 (OMIM: 608351) immunoglobulin superfa ( 431) 398 58.0 5e-08 XP_011510771 (OMIM: 608351) PREDICTED: immunoglobu ( 430) 394 57.5 6.8e-08 NP_689751 (OMIM: 608351) immunoglobulin superfamil ( 430) 394 57.5 6.8e-08 XP_011510772 (OMIM: 608351) PREDICTED: immunoglobu ( 430) 394 57.5 6.8e-08 NP_001316849 (OMIM: 606011) V-set and immunoglobul ( 284) 384 56.3 1.1e-07 NP_872413 (OMIM: 300620) V-set and immunoglobulin ( 387) 379 55.8 2e-07 XP_006713580 (OMIM: 608351) PREDICTED: immunoglobu ( 372) 371 54.9 3.7e-07 XP_016861278 (OMIM: 608351) PREDICTED: immunoglobu ( 372) 371 54.9 3.7e-07 NP_005805 (OMIM: 602171) cell surface A33 antigen ( 319) 364 54.0 5.7e-07 NP_001193995 (OMIM: 602621) coxsackievirus and ade ( 352) 364 54.1 6.2e-07 XP_011527778 (OMIM: 602621) PREDICTED: coxsackievi ( 348) 359 53.5 9.1e-07 XP_011510776 (OMIM: 608351) PREDICTED: immunoglobu ( 323) 345 51.9 2.6e-06 XP_011510773 (OMIM: 608351) PREDICTED: immunoglobu ( 429) 345 52.0 3.2e-06 XP_011529238 (OMIM: 300620) PREDICTED: V-set and i ( 442) 341 51.5 4.5e-06 XP_005262184 (OMIM: 300620) PREDICTED: V-set and i ( 449) 341 51.5 4.6e-06 NP_001164024 (OMIM: 300620) V-set and immunoglobul ( 423) 336 51.0 6.4e-06 XP_016855494 (OMIM: 602171) PREDICTED: cell surfac ( 211) 321 49.0 1.2e-05 >>NP_620411 (OMIM: 614281) endothelial cell-selective ad (390 aa) initn: 2596 init1: 2596 opt: 2596 Z-score: 1614.7 bits: 307.6 E(85289): 3.4e-83 Smith-Waterman score: 2596; 100.0% identity (100.0% similar) in 390 aa overlap (1-390:1-390) 10 20 30 40 50 60 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_620 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SSSQPWEVPFVMWFFKQKEKEDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_620 SSSQPWEVPFVMWFFKQKEKEDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_620 SGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_620 PAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VSTGPGAAVVAGAVVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAIAPRTLPWPKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_620 VSTGPGAAVVAGAVVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAIAPRTLPWPKS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_620 SDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISP 310 320 330 340 350 360 370 380 390 pF1KE6 IPGGVSSSGLSRMGAVPVMVPAQSQAGSLV :::::::::::::::::::::::::::::: NP_620 IPGGVSSSGLSRMGAVPVMVPAQSQAGSLV 370 380 390 >>XP_011541362 (OMIM: 614281) PREDICTED: endothelial cel (287 aa) initn: 1910 init1: 1910 opt: 1910 Z-score: 1195.5 bits: 229.6 E(85289): 7.5e-60 Smith-Waterman score: 1910; 100.0% identity (100.0% similar) in 287 aa overlap (104-390:1-287) 80 90 100 110 120 130 pF1KE6 FFKQKEKEDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKDSGPYSCSVNVQDK :::::::::::::::::::::::::::::: XP_011 MPSRNLSLRLEGLQEKDSGPYSCSVNVQDK 10 20 30 140 150 160 170 180 190 pF1KE6 QGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSKPAVQYQWDRQLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSKPAVQYQWDRQLPS 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE6 FQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLEVSTGPGAAVVAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLEVSTGPGAAVVAGA 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE6 VVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAIAPRTLPWPKSSDTISKNGTLSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAIAPRTLPWPKSSDTISKNGTLSSV 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE6 TSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISPIPGGVSSSGLSRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISPIPGGVSSSGLSRM 220 230 240 250 260 270 380 390 pF1KE6 GAVPVMVPAQSQAGSLV ::::::::::::::::: XP_011 GAVPVMVPAQSQAGSLV 280 >>XP_005271777 (OMIM: 614281) PREDICTED: endothelial cel (211 aa) initn: 1236 init1: 1236 opt: 1236 Z-score: 783.8 bits: 152.9 E(85289): 6.4e-37 Smith-Waterman score: 1236; 100.0% identity (100.0% similar) in 190 aa overlap (201-390:22-211) 180 190 200 210 220 230 pF1KE6 TLSCQSPRSKPAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEV :::::::::::::::::::::::::::::: XP_005 MISLPGPLVTNLLRFLFLGLSALDVIRGSLSLTNLSSSMAGVYVCKAHNEV 10 20 30 40 50 240 250 260 270 280 290 pF1KE6 GTAQCNVTLEVSTGPGAAVVAGAVVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GTAQCNVTLEVSTGPGAAVVAGAVVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAI 60 70 80 90 100 110 300 310 320 330 340 350 pF1KE6 APRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 APRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTT 120 130 140 150 160 170 360 370 380 390 pF1KE6 DGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV :::::::::::::::::::::::::::::::::::::::: XP_005 DGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV 180 190 200 210 >>NP_055127 (OMIM: 606011) V-set and immunoglobulin doma (327 aa) initn: 160 init1: 98 opt: 422 Z-score: 281.6 bits: 60.6 E(85289): 6.1e-09 Smith-Waterman score: 427; 32.4% identity (59.9% similar) in 339 aa overlap (1-321:1-324) 10 20 30 40 50 60 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEV : ::::.. . : . :: ::.:: .....:.. :.. : . : :. : NP_055 MAELPGPFLCGAL-LGFLCLSGLA------VEVKVPTEPLSTPLGKTAELTCTYSTS--V 10 20 30 40 50 70 80 90 100 110 pF1KE6 SSSQPWEVPFVMWFFKQKEKEDQVLSYING---VTTSKPG-VSLVYSMPSRNL-SLRLEG ..: : ::. : . .: . :: : :: :::. . :. .. .:.: NP_055 GDSFALEWSFVQPG-KPISESHPILYFTNGHLYPTGSKSKRVSLLQNPPTVGVATLKLTD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 LQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQ .. .:.: : :.:: . ... ..:.:::::. : : .: ::....: :. NP_055 VHPSDTGTYLCQVN---NPPDFYTNGLGLINLTVLVPPSNPLCSQSGQTSVGGSTALRCS 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 SPRSKPAVQYQWDRQLPSFQTFFAPAL--DVIRGSLSLTNLSSSMAGVYVCKAHNEVGTA : .. : :.: : : .: : .. : . :.: ::::: . .:.: : : :..:.: NP_055 SSEGAPKPVYNWVR-LGTFPTPSPGSMVQDEVSGQLILTNLSLTSSGTYRCVATNQMGSA 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 QCNVTLEVSTGPGAAVVAGAVVGTLVGLGLLA----GLVLLYHRRGKALEEP--ANDIKE .:..:: : : :. . ::::..:.:.:. ::. :: . ..::: .: ..:..: NP_055 SCELTLSV-TEPSQGRVAGALIGVLLGVLLLSVAAFCLVRFQKERGKKPKETYGGSDLRE 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 DAIAP-----RTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQAL ::::: . .:. . . .. :.::.... : NP_055 DAIAPGISEHTCMRADSSKGFLERPSSASTVTTTKSKLPMVV 290 300 310 320 350 360 370 380 390 pF1KE6 PSPRLPTTDGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV >>NP_079045 (OMIM: 611693,615237) CXADR-like membrane pr (373 aa) initn: 191 init1: 147 opt: 403 Z-score: 269.1 bits: 58.5 E(85289): 3e-08 Smith-Waterman score: 403; 30.7% identity (59.8% similar) in 336 aa overlap (71-386:49-369) 50 60 70 80 90 pF1KE6 QAVEGGEVVLPAWYTLHGEVSSSQPWEVPFVMWFFKQKEKEDQV-LSY-----INGVTTS . :.. ..: ...: ..: :..: NP_079 THTEIKRVAEEKVTLPCHHQLGLPEKDTLDIEWLLTDNEGNQKVVITYSSRHVYNNLTEE 20 30 40 50 60 70 100 110 120 130 140 150 pF1KE6 KPG-VSLVYSMPSRNLSLRLEGLQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPP . : :... .. . . ::..: :. .: : :.:.:. . . : : : :.::: : NP_079 QKGRVAFASNFLAGDASLQIEPLKPSDEGRYTCKVKNSGRYVWS--HVI----LKVLVRP 80 90 100 110 120 130 160 170 180 190 200 pF1KE6 APPSCRLQGVPHVGANVTLSCQSPRSKPAVQYQWDR--QLPSFQTFFAPA--LDVIR-GS . :.:.:.: :...::.:.: . . : :.: . . . . : .: . : NP_079 SKPKCELEGELTEGSDLTLQCESSSGTEPIVYYWQRIREKEGEDERLPPKSRIDYNHPGR 140 150 160 170 180 190 210 220 230 240 250 260 pF1KE6 LSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLEVSTGPGAAVVAGAVVGTLVGLGLLAGLV . : ::. :..:.: : : ::.: .: : . :. . ..:::::.: ..: :. :: NP_079 VLLQNLTMSYSGLYQCTAGNEAGKESCVVRVTVQYVQSIGMVAGAVTGIVAGALLIFLLV 200 210 220 230 240 250 270 280 290 300 310 320 pF1KE6 -LLYHRRGKAL---EEPANDIKEDAIAPRT-LPWPKSSDT---ISKNGTLSSVTSARALR :: .:. : :: :.:.::: ::.. : :.::.. :..:. :. ..: . NP_079 WLLIRRKDKERYEEEERPNEIREDAEAPKARLVKPSSSSSGSRSSRSGSSSTRSTANSAS 260 270 280 290 300 310 330 340 350 360 370 380 pF1KE6 PPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISPIPGGVSSSGLSRMGAVPVMV . : .: :.:..:: : : . :..:. : ..:.. ..: :. NP_079 RSQRTLSTDA-APQPGLATQAY-SLVGPEVRGSEPKK-------VHHANLTKAETTPSMI 320 330 340 350 360 390 pF1KE6 PAQSQAGSLV :.::.: NP_079 PSQSRAFQTV 370 >>NP_001015887 (OMIM: 608351) immunoglobulin superfamily (431 aa) initn: 400 init1: 228 opt: 398 Z-score: 265.1 bits: 58.0 E(85289): 5e-08 Smith-Waterman score: 400; 27.5% identity (58.4% similar) in 353 aa overlap (1-338:1-336) 10 20 30 40 50 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGE- : : .::. .:.:.: ..: :.:.. . .:...: .::: .: . NP_001 MTSQRSPLAP----LLLLSLHGVA----ASLEVSESPGSIQVARGQPAVLPCTFTTSAAL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 VSSSQPWEV-PFVMWFFKQKEKEDQVLSYING-VTTSKP---G-VSLVYSMPSRNLSLRL .. . : : :. .. .. .::. : .: . . : : :... .::. :.:. . NP_001 INLNVIWMVTPL-----SNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFI 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 EGLQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLS .. : .:.: :.: :: : :..: . :.:::::. : :..:: .:..: : NP_001 NNTQLSDTGTYQCLVNNLPDIG---GRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 CQSPRSKPAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTA :.: .. : : :.. ... . . : ..:.... :.:. .:.: : : : .::. NP_001 CSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTS 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 QCNVTLEV-STGP-GAAVVAGAV-VGTLV---GLGLLAGLVLLYHRRGKALEEPA--NDI : . :.: : : . ...:::. .:... ..:. : . .. ..: :: :.: NP_001 TCLLDLQVISPQPRNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEEIPNEI 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 KEDAIAPRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSP .:: . :. ::.. . ...::. : . : . : :.: NP_001 REDDLPPKCSSAKAFHTEISSSDN-NTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQ 290 300 310 320 330 340 350 360 370 380 390 pF1KE6 RLPTTDGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV NP_001 SFSFHSGNANIPSIYANGTHLVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHS 350 360 370 380 390 400 >>XP_011510771 (OMIM: 608351) PREDICTED: immunoglobulin (430 aa) initn: 400 init1: 228 opt: 394 Z-score: 262.7 bits: 57.5 E(85289): 6.8e-08 Smith-Waterman score: 394; 27.4% identity (58.8% similar) in 325 aa overlap (29-338:20-335) 10 20 30 40 50 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGE- :.:.. . .:...: .::: .: . XP_011 MSLVELLLWWNCFSRTGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAAL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 VSSSQPWEV-PFVMWFFKQKEKEDQVLSYING-VTTSKP---G-VSLVYSMPSRNLSLRL .. . : : :. .. .. .::. : .: . . : : :... .::. :.:. . XP_011 INLNVIWMVTPL-----SNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFI 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 EGLQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLS .. : .:.: :.: :: : :..: . :.:::::. : :..:: .:..: : XP_011 NNTQLSDTGTYQCLVNNLPDIG---GRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 CQSPRSKPAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTA :.: .. : : :.. ... . . : ..:.... :.:. .:.: : : : .::. XP_011 CSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTS 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 QCNVTLEV-STGP-GAAVVAGAV-VGTLV---GLGLLAGLVLLYHRRGKALEEPA--NDI : . :.: : : . ...:::. .:... ..:. : . .. ..: :: :.: XP_011 TCLLDLQVISPQPRNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEEIPNEI 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 KEDAIAPRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSP .:: . :. ::.. . ...::. : . : . : :.: XP_011 REDDLPPKCSSAKAFHTEISSSDN-NTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQ 290 300 310 320 330 340 350 360 370 380 390 pF1KE6 RLPTTDGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV XP_011 SFSFHSGNANIPSIYANGTHLVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHS 350 360 370 380 390 400 >>NP_689751 (OMIM: 608351) immunoglobulin superfamily me (430 aa) initn: 400 init1: 228 opt: 394 Z-score: 262.7 bits: 57.5 E(85289): 6.8e-08 Smith-Waterman score: 394; 27.4% identity (58.8% similar) in 325 aa overlap (29-338:20-335) 10 20 30 40 50 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGE- :.:.. . .:...: .::: .: . NP_689 MSLVELLLWWNCFSRTGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAAL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 VSSSQPWEV-PFVMWFFKQKEKEDQVLSYING-VTTSKP---G-VSLVYSMPSRNLSLRL .. . : : :. .. .. .::. : .: . . : : :... .::. :.:. . NP_689 INLNVIWMVTPL-----SNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFI 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 EGLQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLS .. : .:.: :.: :: : :..: . :.:::::. : :..:: .:..: : NP_689 NNTQLSDTGTYQCLVNNLPDIG---GRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 CQSPRSKPAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTA :.: .. : : :.. ... . . : ..:.... :.:. .:.: : : : .::. NP_689 CSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTS 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 QCNVTLEV-STGP-GAAVVAGAV-VGTLV---GLGLLAGLVLLYHRRGKALEEPA--NDI : . :.: : : . ...:::. .:... ..:. : . .. ..: :: :.: NP_689 TCLLDLQVISPQPRNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEEIPNEI 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 KEDAIAPRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSP .:: . :. ::.. . ...::. : . : . : :.: NP_689 REDDLPPKCSSAKAFHTEISSSDN-NTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQ 290 300 310 320 330 340 350 360 370 380 390 pF1KE6 RLPTTDGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV NP_689 SFSFHSGNANIPSIYANGTHLVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHS 350 360 370 380 390 400 >>XP_011510772 (OMIM: 608351) PREDICTED: immunoglobulin (430 aa) initn: 400 init1: 228 opt: 394 Z-score: 262.7 bits: 57.5 E(85289): 6.8e-08 Smith-Waterman score: 394; 27.4% identity (58.8% similar) in 325 aa overlap (29-338:20-335) 10 20 30 40 50 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGE- :.:.. . .:...: .::: .: . XP_011 MSLVELLLWWNCFSRTGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAAL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 VSSSQPWEV-PFVMWFFKQKEKEDQVLSYING-VTTSKP---G-VSLVYSMPSRNLSLRL .. . : : :. .. .. .::. : .: . . : : :... .::. :.:. . XP_011 INLNVIWMVTPL-----SNANQPEQVILYQGGQMFDGAPRFHGRVGFTGTMPATNVSIFI 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 EGLQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLS .. : .:.: :.: :: : :..: . :.:::::. : :..:: .:..: : XP_011 NNTQLSDTGTYQCLVNNLPDIG---GRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 CQSPRSKPAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTA :.: .. : : :.. ... . . : ..:.... :.:. .:.: : : : .::. XP_011 CSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTS 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 QCNVTLEV-STGP-GAAVVAGAV-VGTLV---GLGLLAGLVLLYHRRGKALEEPA--NDI : . :.: : : . ...:::. .:... ..:. : . .. ..: :: :.: XP_011 TCLLDLQVISPQPRNIGLIAGAIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEEIPNEI 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 KEDAIAPRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSP .:: . :. ::.. . ...::. : . : . : :.: XP_011 REDDLPPKCSSAKAFHTEISSSDN-NTLTSSNAYNSRYWSNNPKVHRNTESVSHFSDLGQ 290 300 310 320 330 340 350 360 370 380 390 pF1KE6 RLPTTDGAHPQPISPIPGGVSSSGLSRMGAVPVMVPAQSQAGSLV XP_011 SFSFHSGNANIPSIYANGTHLVPGQHKTLVVTANRGSSPQVMSRSNGSVSRKPRPPHTHS 350 360 370 380 390 400 >>NP_001316849 (OMIM: 606011) V-set and immunoglobulin d (284 aa) initn: 121 init1: 98 opt: 384 Z-score: 259.1 bits: 56.3 E(85289): 1.1e-07 Smith-Waterman score: 384; 33.7% identity (60.1% similar) in 291 aa overlap (1-280:1-276) 10 20 30 40 50 60 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEV : ::::.. . : . :: ::.:: .....:.. :.. : . : :. : NP_001 MAELPGPFLCGAL-LGFLCLSGLA------VEVKVPTEPLSTPLGKTAELTCTYST--SV 10 20 30 40 50 70 80 90 100 110 pF1KE6 SSSQPWEVPFVMWFFKQKEKEDQVLSYING---VTTSKPG-VSLVYSMPSRNL-SLRLEG ..: : ::. : . .: . :: : :: :::. . :. .. .:.: NP_001 GDSFALEWSFVQPG-KPISESHPILYFTNGHLYPTGSKSKRVSLLQNPPTVGVATLKLTD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 LQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQ .. .:.: : :.:: . ... ..:.:::::. : : .: ::....: :. NP_001 VHPSDTGTYLCQVN---NPPDFYTNGLGLINLTVLVPPSNPLCSQSGQTSVGGSTALRCS 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 SPRSKPAVQYQWDRQLPSFQTFFAPAL--DVIRGSLSLTNLSSSMAGVYVCKAHNEVGTA : .. : :.: : : .: : .. : . :.: ::::: . .:.: : : :..:.: NP_001 SSEGAPKPVYNWVR-LGTFPTPSPGSMVQDEVSGQLILTNLSLTSSGTYRCVATNQMGSA 170 180 190 200 210 220 240 250 260 270 280 pF1KE6 QCNVTLEVSTGPGAAVVAGAVVGTLVGLGLLA----GLVLLYHRRGKALEEPANDIKEDA .:..:: : : :. . ::::..:.:.:. ::. :: . ..::: .: NP_001 SCELTLSV-TEPSQGRVAGALIGVLLGVLLLSVAAFCLVRFQKERGKKPKETYGGSDLR 230 240 250 260 270 280 290 300 310 320 330 340 pF1KE6 IAPRTLPWPKSSDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPT 390 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:10:26 2016 done: Tue Nov 8 12:10:28 2016 Total Scan time: 7.590 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]