FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1514, 243 aa 1>>>pF1KE1514 243 - 243 aa - 243 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6484+/-0.000371; mu= 12.9635+/- 0.023 mean_var=82.0637+/-16.312, 0's: 0 Z-trim(114.6): 107 B-trim: 1061 in 2/56 Lambda= 0.141579 statistics sampled from 24434 (24550) to 24434 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.288), width: 16 Scan time: 5.360 The best scores are: opt bits E(85289) NP_001769 (OMIM: 109530) CD48 antigen isoform 1 pr ( 243) 1639 344.3 1.2e-94 NP_001242959 (OMIM: 109530) CD48 antigen isoform 2 ( 252) 1475 310.8 1.5e-84 XP_011508473 (OMIM: 109530) PREDICTED: CD48 antige ( 211) 1422 299.9 2.3e-81 XP_005245682 (OMIM: 109530) PREDICTED: CD48 antige ( 154) 841 181.1 9.4e-46 XP_016858356 (OMIM: 109530) PREDICTED: CD48 antige ( 142) 800 172.7 2.9e-43 XP_011507924 (OMIM: 180300,605554) PREDICTED: natu ( 329) 207 51.9 1.7e-06 NP_057466 (OMIM: 180300,605554) natural killer cel ( 365) 207 51.9 1.8e-06 NP_001034461 (OMIM: 614133) HEPACAM family member ( 462) 190 48.5 2.4e-05 XP_011507923 (OMIM: 180300,605554) PREDICTED: natu ( 334) 187 47.8 2.9e-05 NP_001160135 (OMIM: 180300,605554) natural killer ( 370) 187 47.8 3.1e-05 NP_937794 (OMIM: 614133) HEPACAM family member 2 i ( 450) 181 46.6 8.5e-05 NP_001275739 (OMIM: 614133) HEPACAM family member ( 455) 181 46.6 8.6e-05 NP_001275733 (OMIM: 614133) HEPACAM family member ( 485) 181 46.7 9e-05 NP_001138294 (OMIM: 153420) lymphocyte function-as ( 248) 161 42.4 0.0009 NP_001770 (OMIM: 153420) lymphocyte function-assoc ( 250) 161 42.4 0.0009 XP_016858358 (OMIM: 153420) PREDICTED: lymphocyte ( 257) 161 42.4 0.00092 XP_011514303 (OMIM: 614133) PREDICTED: HEPACAM fam ( 387) 155 41.3 0.003 NP_001333571 (OMIM: 614133) HEPACAM family member ( 387) 155 41.3 0.003 NP_001171810 (OMIM: 604513) SLAM family member 5 i ( 272) 152 40.6 0.0034 NP_003865 (OMIM: 604513) SLAM family member 5 isof ( 328) 152 40.6 0.004 NP_001317671 (OMIM: 604513) SLAM family member 5 i ( 339) 152 40.6 0.0041 NP_001171808 (OMIM: 604513) SLAM family member 5 i ( 345) 152 40.6 0.0042 XP_011508207 (OMIM: 603492) PREDICTED: signaling l ( 196) 147 39.5 0.0054 XP_016857620 (OMIM: 603492) PREDICTED: signaling l ( 218) 147 39.5 0.0059 XP_016856793 (OMIM: 600684) PREDICTED: T-lymphocyt ( 504) 150 40.3 0.0075 NP_058642 (OMIM: 605721) junctional adhesion molec ( 299) 146 39.4 0.0087 NP_001248385 (OMIM: 600684) T-lymphocyte surface a ( 641) 150 40.4 0.0091 NP_002339 (OMIM: 600684) T-lymphocyte surface anti ( 655) 150 40.4 0.0092 XP_016856790 (OMIM: 600684) PREDICTED: T-lymphocyt ( 664) 150 40.4 0.0093 XP_016856789 (OMIM: 600684) PREDICTED: T-lymphocyt ( 678) 150 40.4 0.0095 XP_011507854 (OMIM: 600684) PREDICTED: T-lymphocyt ( 679) 150 40.4 0.0095 XP_016856788 (OMIM: 600684) PREDICTED: T-lymphocyt ( 688) 150 40.4 0.0096 XP_016856787 (OMIM: 600684) PREDICTED: T-lymphocyt ( 697) 150 40.4 0.0097 NP_254273 (OMIM: 608589) SLAM family member 9 isof ( 289) 145 39.2 0.0097 XP_011507852 (OMIM: 600684) PREDICTED: T-lymphocyt ( 701) 150 40.4 0.0098 XP_011507851 (OMIM: 600684) PREDICTED: T-lymphocyt ( 702) 150 40.4 0.0098 XP_011507850 (OMIM: 600684) PREDICTED: T-lymphocyt ( 703) 150 40.4 0.0098 XP_016856786 (OMIM: 600684) PREDICTED: T-lymphocyt ( 711) 150 40.4 0.0099 XP_011525740 (OMIM: 604200) PREDICTED: sialic acid ( 500) 148 39.9 0.0099 NP_001269521 (OMIM: 606625) SLAM family member 7 i ( 296) 145 39.2 0.0099 >>NP_001769 (OMIM: 109530) CD48 antigen isoform 1 precur (243 aa) initn: 1639 init1: 1639 opt: 1639 Z-score: 1820.4 bits: 344.3 E(85289): 1.2e-94 Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGL 190 200 210 220 230 240 pF1KE1 LLT ::: NP_001 LLT >>NP_001242959 (OMIM: 109530) CD48 antigen isoform 2 pre (252 aa) initn: 1475 init1: 1475 opt: 1475 Z-score: 1639.2 bits: 310.8 E(85289): 1.5e-84 Smith-Waterman score: 1475; 99.1% identity (100.0% similar) in 219 aa overlap (1-219:1-219) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGL :::::::::::::::::::::::::::::::::::::.. NP_001 LETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLGKKDPWELRGAQGNWSCFEQRKA 190 200 210 220 230 240 pF1KE1 LLT NP_001 GGPIQPPCTVWW 250 >>XP_011508473 (OMIM: 109530) PREDICTED: CD48 antigen is (211 aa) initn: 1422 init1: 1422 opt: 1422 Z-score: 1581.8 bits: 299.9 E(85289): 2.3e-81 Smith-Waterman score: 1422; 100.0% identity (100.0% similar) in 211 aa overlap (33-243:1-211) 10 20 30 40 50 60 pF1KE1 SRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFYTF :::::::::::::::::::::::::::::: XP_011 MTVVSGSNVTLNISESLPENYKQLTWFYTF 10 20 30 70 80 90 100 110 120 pF1KE1 DQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWK 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 IKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSVLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 IKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSVLE 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE1 TTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGLLL 160 170 180 190 200 210 pF1KE1 T : XP_011 T >>XP_005245682 (OMIM: 109530) PREDICTED: CD48 antigen is (154 aa) initn: 841 init1: 841 opt: 841 Z-score: 942.4 bits: 181.1 E(85289): 9.4e-46 Smith-Waterman score: 841; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 WKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVIPGESVNYTWYGDKRPFPKELQNSV :::::::: XP_005 WKIKLQVLARSFGVEWIASWLVVTVPTILGLLLT 130 140 150 >>XP_016858356 (OMIM: 109530) PREDICTED: CD48 antigen is (142 aa) initn: 800 init1: 800 opt: 800 Z-score: 897.6 bits: 172.7 E(85289): 2.9e-43 Smith-Waterman score: 800; 98.3% identity (99.1% similar) in 117 aa overlap (127-243:26-142) 100 110 120 130 140 150 pF1KE1 SKVQKEDNSTYIMRVLKKTGNEQEWKIKLQVLDPVPKPVIKIEKIEDMDDNCYLKLSCVI . :::::::::::::::::::::::::::: XP_016 MCSRGWDSCLALELLLLPLSLLVTSIQDPVPKPVIKIEKIEDMDDNCYLKLSCVI 10 20 30 40 50 160 170 180 190 200 210 pF1KE1 PGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGESVNYTWYGDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCT 60 70 80 90 100 110 220 230 240 pF1KE1 LARSFGVEWIASWLVVTVPTILGLLLT ::::::::::::::::::::::::::: XP_016 LARSFGVEWIASWLVVTVPTILGLLLT 120 130 140 >>XP_011507924 (OMIM: 180300,605554) PREDICTED: natural (329 aa) initn: 125 init1: 79 opt: 207 Z-score: 237.8 bits: 51.9 E(85289): 1.7e-06 Smith-Waterman score: 207; 26.3% identity (56.0% similar) in 243 aa overlap (10-241:6-240) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY ..: :::: . :: :.. .:: . :. .:. . ...: XP_011 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK 10 20 30 40 50 70 80 90 100 110 pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK . .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: . XP_011 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 KTGNEQEWKIKLQVLDPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY-GDKR .:. : ... :.: : :: .. . :: : : . :::.. . .:.:.:: :.: XP_011 ISGKVQTATFQVFVFDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWYRGSK- 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 PFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWL . . : . . : .. :::.::: :: .. :. :. : :.. : . XP_011 -LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVI 170 180 190 200 210 220 240 pF1KE1 VVTVPTI-LGLLLT .: . .. :: : XP_011 IVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGG 230 240 250 260 270 280 >>NP_057466 (OMIM: 180300,605554) natural killer cell re (365 aa) initn: 125 init1: 79 opt: 207 Z-score: 237.1 bits: 51.9 E(85289): 1.8e-06 Smith-Waterman score: 207; 26.3% identity (56.0% similar) in 243 aa overlap (10-241:6-240) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY ..: :::: . :: :.. .:: . :. .:. . ...: NP_057 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK 10 20 30 40 50 70 80 90 100 110 pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK . .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: . NP_057 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 KTGNEQEWKIKLQVLDPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY-GDKR .:. : ... :.: : :: .. . :: : : . :::.. . .:.:.:: :.: NP_057 ISGKVQTATFQVFVFDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWYRGSK- 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 PFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWL . . : . . : .. :::.::: :: .. :. :. : :.. : . NP_057 -LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVI 170 180 190 200 210 220 240 pF1KE1 VVTVPTI-LGLLLT .: . .. :: : NP_057 IVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGG 230 240 250 260 270 280 >>NP_001034461 (OMIM: 614133) HEPACAM family member 2 is (462 aa) initn: 68 init1: 68 opt: 190 Z-score: 216.9 bits: 48.5 E(85289): 2.4e-05 Smith-Waterman score: 190; 22.9% identity (51.9% similar) in 231 aa overlap (9-224:19-245) 10 20 30 40 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESL- : ::. : : ... .: :: : :. . : . .. NP_001 MGQDAFMEPFGDTLGVFQCKIYLLLFGACSGLKVTVPSHTVHG--VRGQALYLPVHYGFH 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 -PENYKQLTWFYTFDQKIVEW---DSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNS : . :. :.. . . .. . :: . ... . . : ...: :. .: :.. NP_001 TPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEG 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 TYIMRV-LKKTGN-EQEWKIKLQVLDPVPKPVIKIEKIEDMDDNC-YLKLSCVIPGES-V .::..: .. .:. ::.. : ::: :::..:. . . :.: . : . . NP_001 NYIVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTRL 120 130 140 150 160 170 170 180 190 200 210 pF1KE1 NYTWYGDKRP------FPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPC : : . :: . ::..:. . . .. :.: : : :: .. . . : NP_001 AYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIM--PI 180 190 200 210 220 230 220 230 240 pF1KE1 TLARSFGVEWIASWLVVTVPTILGLLLT .:.. NP_001 IYYGPYGLQVNSDKGLKVGEVFTVDLGEAILFDCSADSHPPNTYSWIRRTDNTTYIIKHG 240 250 260 270 280 290 >>XP_011507923 (OMIM: 180300,605554) PREDICTED: natural (334 aa) initn: 125 init1: 79 opt: 187 Z-score: 215.6 bits: 47.8 E(85289): 2.9e-05 Smith-Waterman score: 187; 25.8% identity (54.8% similar) in 248 aa overlap (10-241:6-245) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY ..: :::: . :: :.. .:: . :. .:. . ...: XP_011 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK 10 20 30 40 50 70 80 90 100 110 pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK . .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: . XP_011 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS 60 70 80 90 100 110 120 130 140 150 160 pF1KE1 KTGNEQEWKIKLQVL-----DPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY .:. : ... :. : : :: .. . :: : : . :::.. . .:.:.:: XP_011 ISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWY 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 -GDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEW :.: . . : . . : .. :::.::: :: .. :. :. : :.. : XP_011 RGSK--LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFW 180 190 200 210 220 230 240 pF1KE1 IASWLVVTVPTI-LGLLLT ..: . .. :: : XP_011 PFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQT 230 240 250 260 270 280 >>NP_001160135 (OMIM: 180300,605554) natural killer cell (370 aa) initn: 125 init1: 79 opt: 187 Z-score: 215.0 bits: 47.8 E(85289): 3.1e-05 Smith-Waterman score: 187; 25.8% identity (54.8% similar) in 248 aa overlap (10-241:6-245) 10 20 30 40 50 60 pF1KE1 MCSRGWDSCLALELLLLPLSLLVTSIQGHLVHMTVVSGSNVTLNISESLPENYKQLTWFY ..: :::: . :: :.. .:: . :. .:. . ...: NP_001 MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQ-PNSIQTKVDSIAWKK 10 20 30 40 50 70 80 90 100 110 pF1KE1 TFDQK-----IVEWD--SRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLK . .. :..:. : :. ...:. :. . .: :. .:..:.. : ..: . NP_001 LLPSQNGFHHILKWENGSLPSNTSNDRFSFIVK----NLSLLIKAAQQQDSGLYCLEVTS 60 70 80 90 100 110 120 130 140 150 160 pF1KE1 KTGNEQEWKIKLQVL-----DPVPKPVIKIE-KIEDMDDNCYLKLSCVIPGE-SVNYTWY .:. : ... :. : : :: .. . :: : : . :::.. . .:.:.:: NP_001 ISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRG-RCQVALSCLVSRDGNVSYAWY 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 -GDKRPFPKELQNSVLETTLMPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEW :.: . . : . . : .. :::.::: :: .. :. :. : :.. : NP_001 RGSK--LIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFW 180 190 200 210 220 230 240 pF1KE1 IASWLVVTVPTI-LGLLLT ..: . .. :: : NP_001 PFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQT 230 240 250 260 270 280 243 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:11:59 2016 done: Mon Nov 7 01:12:00 2016 Total Scan time: 5.360 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]