FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4587, 893 aa 1>>>pF1KE4587 893 - 893 aa - 893 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0399+/-0.0011; mu= 13.2939+/- 0.066 mean_var=118.3543+/-23.059, 0's: 0 Z-trim(107.0): 38 B-trim: 5 in 1/49 Lambda= 0.117891 statistics sampled from 9306 (9327) to 9306 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.287), width: 16 Scan time: 4.250 The best scores are: opt bits E(32554) CCDS10656.1 MVP gene_id:9961|Hs108|chr16 ( 893) 5814 1000.7 0 >>CCDS10656.1 MVP gene_id:9961|Hs108|chr16 (893 aa) initn: 5814 init1: 5814 opt: 5814 Z-score: 5347.8 bits: 1000.7 E(32554): 0 Smith-Waterman score: 5814; 100.0% identity (100.0% similar) in 893 aa overlap (1-893:1-893) 10 20 30 40 50 60 pF1KE4 MATEEFIIRIPPYHYIHVLDQNSNVSRVEVGPKTYIRQDNERVLFAPMRMVTVPPRHYCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MATEEFIIRIPPYHYIHVLDQNSNVSRVEVGPKTYIRQDNERVLFAPMRMVTVPPRHYCT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VANPVSRDAQGLVLFDVTGQVRLRHADLEIRLAQDPFPLYPGEVLEKDITPLQVVLPNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VANPVSRDAQGLVLFDVTGQVRLRHADLEIRLAQDPFPLYPGEVLEKDITPLQVVLPNTA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LHLKALLDFEDKDGDKVVAGDEWLFEGPGTYIPRKEVEVVEIIQATIIRQNQALRLRARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LHLKALLDFEDKDGDKVVAGDEWLFEGPGTYIPRKEVEVVEIIQATIIRQNQALRLRARK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ECWDRDGKERVTGEEWLVTTVGAYLPAVFEEVLDLVDAVILTEKTALHLRARRNFRDFRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ECWDRDGKERVTGEEWLVTTVGAYLPAVFEEVLDLVDAVILTEKTALHLRARRNFRDFRG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VSRRTGEEWLVTVQDTEAHVPDVHEEVLGVVPITTLGPHNYCVILDPVGPDGKNQLGQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VSRRTGEEWLVTVQDTEAHVPDVHEEVLGVVPITTLGPHNYCVILDPVGPDGKNQLGQKR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VVKGEKSFFLQPGEQLEQGIQDVYVLSEQQGLLLRALQPLEEGEDEEKVSHQAGDHWLIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VVKGEKSFFLQPGEQLEQGIQDVYVLSEQQGLLLRALQPLEEGEDEEKVSHQAGDHWLIR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GPLEYVPSAKVEVVEERQAIPLDENEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEKELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GPLEYVPSAKVEVVEERQAIPLDENEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEKELP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 PGVEELLNKGQDPLADRGEKDTAKSLQPLAPRNKTRVVSYRVPHNAAVQVYDYREKRARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PGVEELLNKGQDPLADRGEKDTAKSLQPLAPRNKTRVVSYRVPHNAAVQVYDYREKRARV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 VFGPELVSLGPEEQFTVLSLSAGRPKRPHARRALCLLLGPDFFTDVITIETADHARLQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VFGPELVSLGPEEQFTVLSLSAGRPKRPHARRALCLLLGPDFFTDVITIETADHARLQLQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 LAYNWHFEVNDRKDPQETAKLFSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LAYNWHFEVNDRKDPQETAKLFSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 TAVFGFETSEAKGPDGMALPRPRDQAVFPQNGLVVSSVDVQSVEPVDQRTRDALQRSVQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TAVFGFETSEAKGPDGMALPRPRDQAVFPQNGLVVSSVDVQSVEPVDQRTRDALQRSVQL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 AIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEALSMAVESTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEALSMAVESTG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE4 TAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELQRVQKVRELELVYARAQLELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELQRVQKVRELELVYARAQLELE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE4 VSKAQQLAEVEVKKFKQMTEAIGPSTIRDLAVAGPEMQVKLLQSLGLKSTLITDGSTPIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VSKAQQLAEVEVKKFKQMTEAIGPSTIRDLAVAGPEMQVKLLQSLGLKSTLITDGSTPIN 790 800 810 820 830 840 850 860 870 880 890 pF1KE4 LFNTAFGLLGMGPEGQPLGRRVASGPSPGEGISPQSAQAPQAPGDNHVVPVLR ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LFNTAFGLLGMGPEGQPLGRRVASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 850 860 870 880 890 893 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:45:16 2016 done: Sat Nov 5 23:45:17 2016 Total Scan time: 4.250 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]