FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1556, 460 aa 1>>>pF1KE1556 460 - 460 aa - 460 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4838+/-0.000918; mu= 17.4025+/- 0.055 mean_var=81.3048+/-15.947, 0's: 0 Z-trim(106.9): 32 B-trim: 83 in 2/47 Lambda= 0.142238 statistics sampled from 9258 (9275) to 9258 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.285), width: 16 Scan time: 3.150 The best scores are: opt bits E(32554) CCDS7593.1 GFRA1 gene_id:2674|Hs108|chr10 ( 460) 3134 653.0 1.9e-187 CCDS44481.1 GFRA1 gene_id:2674|Hs108|chr10 ( 465) 3114 648.9 3.2e-186 CCDS47816.1 GFRA2 gene_id:2675|Hs108|chr8 ( 464) 1436 304.5 1.5e-82 CCDS55208.1 GFRA2 gene_id:2675|Hs108|chr8 ( 359) 1114 238.4 9.3e-63 CCDS55207.1 GFRA2 gene_id:2675|Hs108|chr8 ( 331) 1033 221.7 8.8e-58 CCDS4201.1 GFRA3 gene_id:2676|Hs108|chr5 ( 400) 705 154.5 1.9e-37 CCDS13055.1 GFRA4 gene_id:64096|Hs108|chr20 ( 269) 670 147.2 2e-35 CCDS13056.1 GFRA4 gene_id:64096|Hs108|chr20 ( 299) 343 80.1 3.4e-15 CCDS4957.1 GFRAL gene_id:389400|Hs108|chr6 ( 394) 277 66.7 5.1e-11 >>CCDS7593.1 GFRA1 gene_id:2674|Hs108|chr10 (460 aa) initn: 3134 init1: 3134 opt: 3134 Z-score: 3478.9 bits: 653.0 E(32554): 1.9e-187 Smith-Waterman score: 3134; 100.0% identity (100.0% similar) in 460 aa overlap (1-460:1-460) 10 20 30 40 50 60 pF1KE1 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDSP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YEPVNSRLSDIFRVVPFISVEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTTSVSND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 YEPVNSRLSDIFRVVPFISVEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTTSVSND 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREKPNCLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 VCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREKPNCLN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPNYIDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPNYIDSS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPVQTTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPVQTTTA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCISNGNYEKEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 TTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCISNGNYEKEGL 370 380 390 400 410 420 430 440 450 460 pF1KE1 GASSHITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS :::::::::::::::::::::::::::::::::::::::: CCDS75 GASSHITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS 430 440 450 460 >>CCDS44481.1 GFRA1 gene_id:2674|Hs108|chr10 (465 aa) initn: 2207 init1: 2207 opt: 3114 Z-score: 3456.6 bits: 648.9 E(32554): 3.2e-186 Smith-Waterman score: 3114; 98.9% identity (98.9% similar) in 465 aa overlap (1-460:1-465) 10 20 30 40 50 60 pF1KE1 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKETNF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDSP 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 YEPVNSRLSDIFRVVPFIS-----VEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTT ::::::::::::::::::: :::::::::::::::::::::::::::::::::::: CCDS44 YEPVNSRLSDIFRVVPFISDVFQQVEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTT 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 SVSNDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SVSNDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREK 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 PNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPN 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE1 YIDSSSLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 YIDSSSLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPV 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE1 QTTTATTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCISNGNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 QTTTATTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCISNGNY 370 380 390 400 410 420 420 430 440 450 460 pF1KE1 EKEGLGASSHITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS ::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EKEGLGASSHITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS 430 440 450 460 >>CCDS47816.1 GFRA2 gene_id:2675|Hs108|chr8 (464 aa) initn: 1385 init1: 612 opt: 1436 Z-score: 1595.7 bits: 304.5 E(32554): 1.5e-82 Smith-Waterman score: 1436; 49.8% identity (75.5% similar) in 436 aa overlap (27-447:38-460) 10 20 30 40 50 pF1KE1 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGK .:::.:.. : :..::..:::::::.::. CCDS47 CLFFFLDETLRSLASPSSLQGPELHGWRPPVDCVRANELCAAESNCSSRYRTLRQCLAGR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 ETNFSLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSL-QGNDL . : ::. ::..:.:.:... ::.:::::::::: .::.::::.. .: .:... CCDS47 DRNTMLAN-----KECQAALEVLQESPLYDCRCKRGMKKELQCLQIYWSIHLGLTEGEEF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 LEDSPYEPVNSRLSDIFRVVPFIS---VEHI--PKGNNCLDAAKACNLDDICKKYRSAYI : ::::::.::::::::.. ..: .. . :.:.::::::::::.: ::: ::.:: CCDS47 YEASPYEPVTSRLSDIFRLASIFSGTGADPVVSAKSNHCLDAAKACNLNDNCKKLRSSYI 130 140 150 160 170 180 180 190 200 210 220 pF1KE1 TPCTTSVS-NDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCS . :. .: .. :::::::::::::::.::....: ::::::.: ::.:::::::.: :: CCDS47 SICNREISPTERCNRRKCHKALRQFFDRVPSEYTYRMLFCSCQDQACAERRRQTILPSCS 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE1 YEEREKPNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIG ::..::::::.:. :.:...:::::::: .::. ..:.:: .:: :: .:.:.:: CCDS47 YEDKEKPNCLDLRGVCRTDHLCRSRLADFHANCRASYQTVTSCPADNYQACLGSYAGMIG 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE1 TVMTPNYIDSS--SLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVT :::::.::: .. :.:::.: .::: ::: ::: : .: ::.:::::::::.::. CCDS47 FDMTPNYVDSSPTGIVVSPWCSCRGSGNMEEECEKFLRDFTENPCLRNAIQAFGNGTDVN 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE1 VWQPAFPVQTTTATTTTALRVKNKPLGPA--GSENEIPTHVLPPCANLQAQKLKSNVSGN : .: : . .: : ::.. : : .. . . : :. :...: : ::.: : . CCDS47 V-SPKGP----SFQATQAPRVEKTPSLPDDLSDSTSLGTSVITTCTSVQEQGLKANNSKE 370 380 390 400 410 410 420 430 440 450 460 pF1KE1 THLCISNGNYEKEGLGASSHITTKSMAAP----PSCGLSPLLVLVVTALSTLLSLTETS .:... . .. .:. . : ..: :: .:. : ::.. CCDS47 LSMCFTELT---TNIIPGSNKVIKPNSGPSRARPSAALTVLSVLMLKLAL 420 430 440 450 460 >>CCDS55208.1 GFRA2 gene_id:2675|Hs108|chr8 (359 aa) initn: 1059 init1: 612 opt: 1114 Z-score: 1240.2 bits: 238.4 E(32554): 9.3e-63 Smith-Waterman score: 1114; 49.4% identity (73.7% similar) in 350 aa overlap (112-447:14-355) 90 100 110 120 130 pF1KE1 KSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDSPYEPVNSRLSDIFRVVPFIS-- :... : ::::::.::::::::.. ..: CCDS55 MILANVFCLFFFLGEEFYEASPYEPVTSRLSDIFRLASIFSGT 10 20 30 40 140 150 160 170 180 190 pF1KE1 -VEHI--PKGNNCLDAAKACNLDDICKKYRSAYITPCTTSVS-NDVCNRRKCHKALRQFF .. . :.:.::::::::::.: ::: ::.::. :. .: .. :::::::::::::: CCDS55 GADPVVSAKSNHCLDAAKACNLNDNCKKLRSSYISICNREISPTERCNRRKCHKALRQFF 50 60 70 80 90 100 200 210 220 230 240 250 pF1KE1 DKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEEREKPNCLNLQDSCKTNYICRSRL :.::....: ::::::.: ::.:::::::.: ::::..::::::.:. :.:...::::: CCDS55 DRVPSEYTYRMLFCSCQDQACAERRRQTILPSCSYEDKEKPNCLDLRGVCRTDHLCRSRL 110 120 130 140 150 160 260 270 280 290 300 310 pF1KE1 ADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPNYIDSS--SLSVAPWCDCSNS ::: .::. ..:.:: .:: :: .:.:.:: :::::.::: .. :.:::.: .: CCDS55 ADFHANCRASYQTVTSCPADNYQACLGSYAGMIGFDMTPNYVDSSPTGIVVSPWCSCRGS 170 180 190 200 210 220 320 330 340 350 360 370 pF1KE1 GNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPVQTTTATTTTALRVKNKPL :: ::: ::: : .: ::.:::::::::.::.: .: : . .: : ::.. : CCDS55 GNMEEECEKFLRDFTENPCLRNAIQAFGNGTDVNV-SPKGP----SFQATQAPRVEKTPS 230 240 250 260 270 380 390 400 410 420 430 pF1KE1 GPA--GSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCISNGNYEKEGLGASSHITTKSM : .. . . : :. :...: : ::.: : . .:... .. .:. . : CCDS55 LPDDLSDSTSLGTSVITTCTSVQEQGLKANNSKELSMCFTE---LTTNIIPGSNKVIKPN 280 290 300 310 320 330 440 450 460 pF1KE1 AAP----PSCGLSPLLVLVVTALSTLLSLTETS ..: :: .:. : ::.. CCDS55 SGPSRARPSAALTVLSVLMLKLAL 340 350 >>CCDS55207.1 GFRA2 gene_id:2675|Hs108|chr8 (331 aa) initn: 960 init1: 612 opt: 1033 Z-score: 1150.8 bits: 221.7 E(32554): 8.8e-58 Smith-Waterman score: 1033; 48.0% identity (72.7% similar) in 333 aa overlap (128-447:3-327) 100 110 120 130 140 150 pF1KE1 NCLRIYWSMYQSLQGNDLLEDSPYEPVNSRLSDIFRVVPFISVEHIP----KGNNCLDAA :...: . :... : :.:.::::: CCDS55 MILANVFCLFFFLGTGADPVVSAKSNHCLDAA 10 20 30 160 170 180 190 200 210 pF1KE1 KACNLDDICKKYRSAYITPCTTSVS-NDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCR :::::.: ::: ::.::. :. .: .. :::::::::::::::.::....: ::::::. CCDS55 KACNLNDNCKKLRSSYISICNREISPTERCNRRKCHKALRQFFDRVPSEYTYRMLFCSCQ 40 50 60 70 80 90 220 230 240 250 260 270 pF1KE1 DIACTERRRQTIVPVCSYEEREKPNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSC : ::.:::::::.: ::::..::::::.:. :.:...:::::::: .::. ..:.:: CCDS55 DQACAERRRQTILPSCSYEDKEKPNCLDLRGVCRTDHLCRSRLADFHANCRASYQTVTSC 100 110 120 130 140 150 280 290 300 310 320 330 pF1KE1 LKENYADCLLAYSGLIGTVMTPNYIDSS--SLSVAPWCDCSNSGNDLEECLKFLNFFKDN .:: :: .:.:.:: :::::.::: .. :.:::.: .::: ::: ::: : .: CCDS55 PADNYQACLGSYAGMIGFDMTPNYVDSSPTGIVVSPWCSCRGSGNMEEECEKFLRDFTEN 160 170 180 190 200 210 340 350 360 370 380 pF1KE1 TCLKNAIQAFGNGSDVTVWQPAFPVQTTTATTTTALRVKNKPLGPA--GSENEIPTHVLP ::.:::::::::.::.: .: : . .: : ::.. : : .. . . : :. CCDS55 PCLRNAIQAFGNGTDVNV-SPKGP----SFQATQAPRVEKTPSLPDDLSDSTSLGTSVIT 220 230 240 250 260 390 400 410 420 430 440 pF1KE1 PCANLQAQKLKSNVSGNTHLCISNGNYEKEGLGASSHITTKSMAAP----PSCGLSPLLV :...: : ::.: : . .:... . .. .:. . : ..: :: .:. : : CCDS55 TCTSVQEQGLKANNSKELSMCFTELT---TNIIPGSNKVIKPNSGPSRARPSAALTVLSV 270 280 290 300 310 320 450 460 pF1KE1 LVVTALSTLLSLTETS :.. CCDS55 LMLKLAL 330 >>CCDS4201.1 GFRA3 gene_id:2676|Hs108|chr5 (400 aa) initn: 500 init1: 207 opt: 705 Z-score: 785.9 bits: 154.5 E(32554): 1.9e-37 Smith-Waterman score: 705; 35.1% identity (61.1% similar) in 368 aa overlap (29-387:44-396) 10 20 30 40 50 pF1KE1 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKET :..: .: . .::. :. : .:... : CCDS42 VLMLLLLLPPSPLPLAAGDPLPTESRLMNSCLQARRKCQADPTCSAAYHHLDSCTSSIST 20 30 40 50 60 70 60 70 80 90 100 110 pF1KE1 NF-SLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQ-GNDLL . : .. : .: : . :...:: .: :.: ::.. :: :::..... . :: : CCDS42 PLPSEEPSVPA--DCLEAAQQLRNSSLIGCMCHRRMKNQVACLDIYWTVHRARSLGNYEL 80 90 100 110 120 130 120 130 140 150 160 170 pF1KE1 EDSPYEPVNSRLSDIFRVVPFISVEHI-PKGNNCLDAAKACNLDDICKKYRSAYITPCTT . :::: .. : ... . ... . : .. :: : :.:.: : . :.:: : CCDS42 DVSPYE--DTVTSKPWKM-NLSKLNMLKPDSDLCLKFAMLCTLNDKCDRLRKAYGEAC-- 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 SVSNDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSC--RDIACTERRRQTIVPVCSYEER :. :.:. : . : ::.:. :. :.:.: : : .: ::::.::.: :. CCDS42 --SGPHCQRHVCLRQLLTFFEKAAEPHAQGLLLCPCAPNDRGCGERRRNTIAPNCALPPV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 EKPNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMT ::::.:. : .. .:::::.:: :.:.: . ...: :. . :: :: :::::.:: CCDS42 A-PNCLELRRLCFSDPLCRSRLVDFQTHCHPMD-ILGTCATEQ-SRCLRAYLGLIGTAMT 250 260 270 280 290 300 300 310 320 330 340 pF1KE1 PNYIDSSSLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQA---FGNGSDVTVW- ::.... . ::: : : .::: ::: . .::. : :: .:: : : . : CCDS42 PNFVSNVNTSVALSCTCRGSGNLQEECEMLEGFFSHNPCLTEAIAAKMRFHSQLFSQDWP 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE1 QPAFPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLC .:.: :.. . . :. .: :. .: .: CCDS42 HPTFAVMAHQNENPA---VRPQPWVPSLFSCTLPLILLLSLW 370 380 390 400 410 420 430 440 450 460 pF1KE1 ISNGNYEKEGLGASSHITTKSMAAPPSCGLSPLLVLVVTALSTLLSLTETS >>CCDS13055.1 GFRA4 gene_id:64096|Hs108|chr20 (269 aa) initn: 766 init1: 370 opt: 670 Z-score: 749.5 bits: 147.2 E(32554): 2e-35 Smith-Waterman score: 670; 43.3% identity (67.6% similar) in 210 aa overlap (146-353:23-227) 120 130 140 150 160 170 pF1KE1 LEDSPYEPVNSRLSDIFRVVPFISVEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTT :: :.:::.::. : :.. :: :.. : CCDS13 MVRCLGPALLLLLLLGSASSVGGNRCVDAAEACTADARCQRLRSEYVAQCLG 10 20 30 40 50 180 190 200 210 220 230 pF1KE1 SVSNDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEER-- ... : : .:..:::.:: . : ....::: : ::.::::::.:: :.. CCDS13 RAAQGGCPRARCRRALRRFFARGPPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGP 60 70 80 90 100 110 240 250 260 270 280 290 pF1KE1 EKPNCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMT :.::. . :. . .:: :: : ..: : . ..:: .. : :: ::.::.::..: CCDS13 APPSCLEPLNFCERSRVCRPRLLAFQVSCTPAPSAPDGCLLDQGARCLRAYAGLVGTAVT 120 130 140 150 160 170 300 310 320 330 340 350 pF1KE1 PNYIDSSSLSVAPWCDCSNSGNDLEECLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQPAF :::.:. : :::::::. ::: :.: : ..: : :: .:::::..: : :.. CCDS13 PNYVDNVSARVAPWCDCGASGNRREDCEAFRGLFTRNRCLDGAIQAFASG-----WPPVL 180 190 200 210 220 360 370 380 390 400 410 pF1KE1 PVQTTTATTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCISNG CCDS13 LDQLNPQGDPEHSLLQVSSTGRALERRSLLSILPVLALPALL 230 240 250 260 >>CCDS13056.1 GFRA4 gene_id:64096|Hs108|chr20 (299 aa) initn: 644 init1: 307 opt: 343 Z-score: 386.2 bits: 80.1 E(32554): 3.4e-15 Smith-Waterman score: 493; 35.0% identity (56.7% similar) in 240 aa overlap (146-353:23-257) 120 130 140 150 160 170 pF1KE1 LEDSPYEPVNSRLSDIFRVVPFISVEHIPKGNNCLDAAKACNLDDICKKYRSAYITPCTT :: :.:::.::. : :.. :: :.. : CCDS13 MVRCLGPALLLLLLLGSASSVGGNRCVDAAEACTADARCQRLRSEYVAQCLG 10 20 30 40 50 180 190 200 210 220 230 pF1KE1 SVSNDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTIVPVCSYEER-- ... : : .:..:::.:: . : ....::: : ::.::::::.:: :.. CCDS13 RAAQGGCPRARCRRALRRFFARGPPALTHALLFCPCAGPACAERRRQTFVPSCAFSGPGP 60 70 80 90 100 110 240 250 260 270 280 pF1KE1 EKPNCLNLQDSCKTNYICR-SRLA-----DFFTNCQPESRSVSSCLKENYADCLLAYS-- :.::. . :. . .:: .: : . . .: : .. . . :. : CCDS13 APPSCLEPLNFCERSRVCRCARAAAGPWRGWGRGLSPAHRPPAAQASPPGLSGLVHPSAQ 120 130 140 150 160 170 290 300 310 320 pF1KE1 ---------------------GL-IGTVMTPNYIDSSSLSVAPWCDCSNSGNDLEECLKF :. ::..::::.:. : :::::::. ::: :.: : CCDS13 RPRRLPAGPGRPLPARLRGPRGVPAGTAVTPNYVDNVSARVAPWCDCGASGNRREDCEAF 180 190 200 210 220 230 330 340 350 360 370 380 pF1KE1 LNFFKDNTCLKNAIQAFGNGSDVTVWQPAFPVQTTTATTTTALRVKNKPLGPAGSENEIP ..: : :: .:::::..: : :.. CCDS13 RGLFTRNRCLDGAIQAFASG-----WPPVLLDQLNPQGDPEHSLLQVSSTGRALERRSLL 240 250 260 270 280 >>CCDS4957.1 GFRAL gene_id:389400|Hs108|chr6 (394 aa) initn: 178 init1: 142 opt: 277 Z-score: 311.3 bits: 66.7 E(32554): 5.1e-11 Smith-Waterman score: 301; 20.7% identity (52.7% similar) in 338 aa overlap (6-333:2-317) 10 20 30 40 50 pF1KE1 MFLATLYFALPLLDLLLSAEVSGGDRLDCVKASDQCLKEQS-CSTKYRTLRQCVAGKETN . : . . : : : .. .:. .:::.. . :. .:.... : .... CCDS49 MIVFIFLAMGLSLENEYTSQTN-NCTYLREQCLRDANGCKHAWRVMED--ACNDSD 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 FSLASGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSLQGNDLLEDS . .. .. : ... : .... .: : .. ..: :. .. : CCDS49 PGDPCKMRNSSYCNLSIQYLVESNFQFKECL--------CTDDFYCTVNKLLGKKCINKS 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 PYEPVNSRLSDIFRVVPFISVEHIPKGN-NCLDAAKACNLDDICKKYRSAYITPCTTSVS : . : :. .: :: .::..:.:: : .:. ..:. : :.. CCDS49 D----NVK-EDKFKWNLTTRSHHGFKGMWSCLEVAEACVGDVVCNAQLASYLKAC--SAN 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 NDVCNRRKCHKALRQFFDKVPAKHSYGMLFCSC--RDIACTERRRQTIVPVCSYEEREKP .. :. ..:. :.: :....: . . . ::.: :: : . .. .:. . : CCDS49 GNPCDLKQCQAAIRFFYQNIPFNIAQMLAFCDCAQSDIPCQQSKEALHSKTCAVNMVPPP 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE1 NCLNLQDSCKTNYICRSRLADFFTNCQPESRSVSSCLKENYADCLLAYSGLIGTVMTPN- .::.. ::... .:: . : ..: .: . .: ... .:. . : : . CCDS49 TCLSVIRSCQNDELCRRHYRTFQSKCW--QRVTRKCHEDE--NCISTLSKQDLTCSGSDD 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE1 ----YIDSSSLSVAPWCDCSNSGNDLEE-CLKFLNFFKDNTCLKNAIQAFGNGSDVTVWQ ::: . . : : . .. : : : .... ..:. CCDS49 CKAAYIDILGTVLQVQCTCRTITQSEESLCKIFQHMLHRKSCFNYPTLSNVKGMALYTRK 280 290 300 310 320 330 360 370 380 390 400 410 pF1KE1 PAFPVQTTTATTTTALRVKNKPLGPAGSENEIPTHVLPPCANLQAQKLKSNVSGNTHLCI CCDS49 HANKITLTGFHSPFNGEVIYAAMCMTVTCGILLLVMVKLRTSRISSKARDPSSIQIPGEL 340 350 360 370 380 390 460 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:22:27 2016 done: Mon Nov 7 01:22:27 2016 Total Scan time: 3.150 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]