FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6410, 468 aa 1>>>pF1KE6410 468 - 468 aa - 468 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5999+/-0.000949; mu= 15.8338+/- 0.057 mean_var=62.8058+/-12.858, 0's: 0 Z-trim(104.1): 16 B-trim: 28 in 1/47 Lambda= 0.161836 statistics sampled from 7716 (7721) to 7716 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.607), E-opt: 0.2 (0.237), width: 16 Scan time: 3.050 The best scores are: opt bits E(32554) CCDS9823.1 COQ6 gene_id:51004|Hs108|chr14 ( 468) 3091 730.6 8.3e-211 CCDS9824.2 COQ6 gene_id:51004|Hs108|chr14 ( 443) 2726 645.4 3.6e-185 >>CCDS9823.1 COQ6 gene_id:51004|Hs108|chr14 (468 aa) initn: 3091 init1: 3091 opt: 3091 Z-score: 3898.1 bits: 730.6 E(32554): 8.3e-211 Smith-Waterman score: 3091; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468) 10 20 30 40 50 60 pF1KE6 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 MAARLVSRCGAVRAAPHSGPLVSWRRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 HDKKILLLEAGPKKVLEKLSETYSNRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 WDACSEALIMFDKDNLDDMGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 PMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 ATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 ADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 VALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHN 370 380 390 400 410 420 430 440 450 460 pF1KE6 TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK :::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 TALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK 430 440 450 460 >>CCDS9824.2 COQ6 gene_id:51004|Hs108|chr14 (443 aa) initn: 2726 init1: 2726 opt: 2726 Z-score: 3437.9 bits: 645.4 E(32554): 3.6e-185 Smith-Waterman score: 2726; 100.0% identity (100.0% similar) in 414 aa overlap (55-468:30-443) 30 40 50 60 70 80 pF1KE6 RRWSGASTDTVYDVVVSGGGLVGAAMACALGYDIHFHDKKILLLEAGPKKVLEKLSETYS :::::::::::::::::::::::::::::: CCDS98 MRGQGPPLSSFGVWLASRAASDPSRPRRQGYDIHFHDKKILLLEAGPKKVLEKLSETYS 10 20 30 40 50 90 100 110 120 130 140 pF1KE6 NRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQVWDACSEALIMFDKDNLDDMGYIVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 NRVSSISPGSATLLSSFGAWDHICNMRYRAFRRMQVWDACSEALIMFDKDNLDDMGYIVE 60 70 80 90 100 110 150 160 170 180 190 200 pF1KE6 NDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 NDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLL 120 130 140 150 160 170 210 220 230 240 250 260 pF1KE6 IGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 IGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPLSD 180 190 200 210 220 230 270 280 290 300 310 320 pF1KE6 TLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 TLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPT 240 250 260 270 280 290 330 340 350 360 370 380 pF1KE6 KVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 KVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFG 300 310 320 330 340 350 390 400 410 420 430 440 pF1KE6 DISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS98 DISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLVLL 360 370 380 390 400 410 450 460 pF1KE6 RTWGLQATNAVSPLKEQIMAFASK :::::::::::::::::::::::: CCDS98 RTWGLQATNAVSPLKEQIMAFASK 420 430 440 468 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:00:31 2016 done: Tue Nov 8 13:00:31 2016 Total Scan time: 3.050 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]