FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5717, 657 aa 1>>>pF1KE5717 657 - 657 aa - 657 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 16.9237+/-0.000572; mu= -34.0620+/- 0.036 mean_var=803.4194+/-164.979, 0's: 0 Z-trim(122.6): 46 B-trim: 0 in 0/57 Lambda= 0.045248 statistics sampled from 40933 (40987) to 40933 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.481), width: 16 Scan time: 11.210 The best scores are: opt bits E(85289) NP_031372 (OMIM: 606459) opioid growth factor rece ( 677) 4413 303.8 1.4e-81 >>NP_031372 (OMIM: 606459) opioid growth factor receptor (677 aa) initn: 4413 init1: 4413 opt: 4413 Z-score: 1585.7 bits: 303.8 E(85289): 1.4e-81 Smith-Waterman score: 4560; 97.0% identity (97.0% similar) in 677 aa overlap (1-657:1-677) 10 20 30 40 50 60 pF1KE5 MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE 490 500 510 520 530 540 550 560 570 580 pF1KE5 TPGPRPAGPAGDEPAESPSETPGP--------------------SPAGPTRDEPAESPSE :::::::::::::::::::::::: :::::::::::::::: NP_031 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSE 550 560 570 580 590 600 590 600 610 620 630 640 pF1KE5 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_031 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA 610 620 630 640 650 660 650 pF1KE5 AELQDAEVESSAKSGKP ::::::::::::::::: NP_031 AELQDAEVESSAKSGKP 670 657 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:01:31 2016 done: Tue Nov 8 06:01:32 2016 Total Scan time: 11.210 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]