FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5859, 460 aa 1>>>pF1KB5859 460 - 460 aa - 460 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9521+/-0.00144; mu= 4.4908+/- 0.082 mean_var=295.0307+/-67.540, 0's: 0 Z-trim(106.5): 634 B-trim: 0 in 0/51 Lambda= 0.074669 statistics sampled from 8269 (9041) to 8269 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.278), width: 16 Scan time: 2.730 The best scores are: opt bits E(32554) CCDS8744.1 IRAK4 gene_id:51135|Hs108|chr12 ( 460) 3031 341.1 1.4e-93 CCDS44862.1 IRAK4 gene_id:51135|Hs108|chr12 ( 336) 2206 252.1 6.5e-67 >>CCDS8744.1 IRAK4 gene_id:51135|Hs108|chr12 (460 aa) initn: 3031 init1: 3031 opt: 3031 Z-score: 1793.6 bits: 341.1 E(32554): 1.4e-93 Smith-Waterman score: 3031; 100.0% identity (100.0% similar) in 460 aa overlap (1-460:1-460) 10 20 30 40 50 60 pF1KB5 MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 QTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 QTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 QQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 QQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 DERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 DERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 FLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND 370 380 390 400 410 420 430 440 450 460 pF1KB5 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS :::::::::::::::::::::::::::::::::::::::: CCDS87 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 430 440 450 460 >>CCDS44862.1 IRAK4 gene_id:51135|Hs108|chr12 (336 aa) initn: 2206 init1: 2206 opt: 2206 Z-score: 1314.8 bits: 252.1 E(32554): 6.5e-67 Smith-Waterman score: 2206; 100.0% identity (100.0% similar) in 336 aa overlap (125-460:1-336) 100 110 120 130 140 150 pF1KB5 APASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPE :::::::::::::::::::::::::::::: CCDS44 MPFCDKDRTLMTPVQNLEQSYMPPDSSSPE 10 20 30 160 170 180 190 200 210 pF1KB5 NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK 40 50 60 70 80 90 220 230 240 250 260 270 pF1KB5 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 100 110 120 130 140 150 280 290 300 310 320 330 pF1KB5 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 160 170 180 190 200 210 340 350 360 370 380 390 pF1KB5 ASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 220 230 240 250 260 270 400 410 420 430 440 450 pF1KB5 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 280 290 300 310 320 330 460 pF1KB5 QEMTAS :::::: CCDS44 QEMTAS 460 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:33:19 2016 done: Mon Nov 7 01:33:19 2016 Total Scan time: 2.730 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]