FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6724, 693 aa 1>>>pF1KE6724 693 - 693 aa - 693 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2115+/-0.000433; mu= 20.4661+/- 0.027 mean_var=72.8487+/-14.997, 0's: 0 Z-trim(111.2): 37 B-trim: 347 in 1/53 Lambda= 0.150267 statistics sampled from 19669 (19696) to 19669 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.231), width: 16 Scan time: 9.010 The best scores are: opt bits E(85289) NP_003866 (OMIM: 600358) GMP synthase [glutamine-h ( 693) 4552 996.8 0 XP_011511565 (OMIM: 600358) PREDICTED: GMP synthas ( 699) 4494 984.2 0 XP_016862911 (OMIM: 600358) PREDICTED: GMP synthas ( 686) 4488 982.9 0 >>NP_003866 (OMIM: 600358) GMP synthase [glutamine-hydro (693 aa) initn: 4552 init1: 4552 opt: 4552 Z-score: 5330.8 bits: 996.8 E(85289): 0 Smith-Waterman score: 4552; 100.0% identity (100.0% similar) in 693 aa overlap (1-693:1-693) 10 20 30 40 50 60 pF1KE6 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE6 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE6 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE 610 620 630 640 650 660 670 680 690 pF1KE6 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE ::::::::::::::::::::::::::::::::: NP_003 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE 670 680 690 >>XP_011511565 (OMIM: 600358) PREDICTED: GMP synthase [g (699 aa) initn: 4494 init1: 4494 opt: 4494 Z-score: 5262.7 bits: 984.2 E(85289): 0 Smith-Waterman score: 4494; 100.0% identity (100.0% similar) in 685 aa overlap (9-693:15-699) 10 20 30 40 50 pF1KE6 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEI :::::::::::::::::::::::::::::::::::::::::::::: XP_011 MALESSNIQFSVQKKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 FPLETPAFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FPLETPAFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE6 GGTVHKKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GGTVHKKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE6 AGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE6 GTSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GTSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQV 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE6 KVINAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVINAAHSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGE 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE6 MNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDF 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE6 HKDEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HKDEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSA 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE6 SVKKPHTLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SVKKPHTLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISS 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE6 KDEPDWESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KDEPDWESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFE 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE6 AHNILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AHNILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPG 610 620 630 640 650 660 660 670 680 690 pF1KE6 NEIPVEVVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE ::::::::::::::::::::::::::::::::::::::: XP_011 NEIPVEVVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE 670 680 690 >>XP_016862911 (OMIM: 600358) PREDICTED: GMP synthase [g (686 aa) initn: 4488 init1: 4488 opt: 4488 Z-score: 5255.8 bits: 982.9 E(85289): 0 Smith-Waterman score: 4488; 100.0% identity (100.0% similar) in 684 aa overlap (10-693:3-686) 10 20 30 40 50 60 pF1KE6 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE6 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE6 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE6 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE6 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE6 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE6 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW 480 490 500 510 520 530 550 560 570 580 590 600 pF1KE6 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR 540 550 560 570 580 590 610 620 630 640 650 660 pF1KE6 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE 600 610 620 630 640 650 670 680 690 pF1KE6 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE ::::::::::::::::::::::::::::::::: XP_016 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE 660 670 680 693 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:44:00 2016 done: Tue Nov 8 15:44:01 2016 Total Scan time: 9.010 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]