FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1374, 428 aa 1>>>pF1KE1374 428 - 428 aa - 428 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.7963+/-0.00035; mu= 0.9856+/- 0.022 mean_var=171.8514+/-35.358, 0's: 0 Z-trim(119.7): 47 B-trim: 213 in 1/55 Lambda= 0.097836 statistics sampled from 34004 (34051) to 34004 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.399), width: 16 Scan time: 10.440 The best scores are: opt bits E(85289) NP_005588 (OMIM: 600729) nuclear factor 1 C-type i ( 428) 2912 423.0 7.2e-118 XP_016882324 (OMIM: 600729) PREDICTED: nuclear fac ( 439) 2871 417.2 4.1e-116 NP_001231933 (OMIM: 600729) nuclear factor 1 C-typ ( 439) 2871 417.2 4.1e-116 NP_001231931 (OMIM: 600729) nuclear factor 1 C-typ ( 508) 2871 417.2 4.6e-116 XP_005259621 (OMIM: 600729) PREDICTED: nuclear fac ( 511) 2871 417.2 4.6e-116 XP_016882323 (OMIM: 600729) PREDICTED: nuclear fac ( 565) 2871 417.3 5.1e-116 XP_016882325 (OMIM: 600729) PREDICTED: nuclear fac ( 419) 2842 413.1 6.7e-115 NP_001231934 (OMIM: 600729) nuclear factor 1 C-typ ( 430) 2801 407.3 3.8e-113 NP_995315 (OMIM: 600729) nuclear factor 1 C-type i ( 499) 2801 407.4 4.3e-113 XP_006722822 (OMIM: 600729) PREDICTED: nuclear fac ( 556) 2801 407.4 4.7e-113 NP_005586 (OMIM: 600727) nuclear factor 1 A-type i ( 498) 1700 252.0 2.6e-66 NP_001128145 (OMIM: 600727) nuclear factor 1 A-typ ( 509) 1700 252.0 2.6e-66 NP_001138984 (OMIM: 600727) nuclear factor 1 A-typ ( 554) 1700 252.0 2.8e-66 XP_016856851 (OMIM: 600727) PREDICTED: nuclear fac ( 490) 1647 244.5 4.6e-64 NP_001138983 (OMIM: 600727) nuclear factor 1 A-typ ( 501) 1647 244.5 4.6e-64 NP_002492 (OMIM: 164005,602535,614753) nuclear fac ( 441) 1617 240.2 7.8e-63 XP_005259975 (OMIM: 164005,602535,614753) PREDICTE ( 502) 1617 240.2 8.7e-63 XP_011539817 (OMIM: 600727) PREDICTED: nuclear fac ( 516) 1613 239.7 1.3e-62 XP_011539814 (OMIM: 600727) PREDICTED: nuclear fac ( 527) 1613 239.7 1.3e-62 NP_005587 (OMIM: 600728) nuclear factor 1 B-type i ( 420) 1580 235.0 2.8e-61 NP_001257973 (OMIM: 164005,602535,614753) nuclear ( 433) 1570 233.6 7.7e-61 XP_005259976 (OMIM: 164005,602535,614753) PREDICTE ( 500) 1571 233.8 7.9e-61 XP_005259977 (OMIM: 164005,602535,614753) PREDICTE ( 494) 1570 233.6 8.6e-61 NP_001257972 (OMIM: 164005,602535,614753) nuclear ( 510) 1570 233.6 8.8e-61 XP_011526342 (OMIM: 164005,602535,614753) PREDICTE ( 518) 1570 233.6 8.9e-61 XP_011539816 (OMIM: 600727) PREDICTED: nuclear fac ( 519) 1560 232.2 2.4e-60 XP_005251527 (OMIM: 600728) PREDICTED: nuclear fac ( 487) 1541 229.5 1.4e-59 NP_001177666 (OMIM: 600728) nuclear factor 1 B-typ ( 494) 1541 229.5 1.5e-59 XP_006716838 (OMIM: 600728) PREDICTED: nuclear fac ( 498) 1541 229.5 1.5e-59 XP_006716837 (OMIM: 600728) PREDICTED: nuclear fac ( 503) 1541 229.5 1.5e-59 XP_005251526 (OMIM: 600728) PREDICTED: nuclear fac ( 561) 1541 229.5 1.6e-59 XP_005251524 (OMIM: 600728) PREDICTED: nuclear fac ( 570) 1541 229.5 1.7e-59 NP_001177667 (OMIM: 600728) nuclear factor 1 B-typ ( 446) 1537 228.9 2e-59 XP_006716836 (OMIM: 600728) PREDICTED: nuclear fac ( 569) 1532 228.3 4e-59 XP_016870229 (OMIM: 600728) PREDICTED: nuclear fac ( 416) 1528 227.6 4.5e-59 XP_016870228 (OMIM: 600728) PREDICTED: nuclear fac ( 419) 1521 226.7 9e-59 XP_005251525 (OMIM: 600728) PREDICTED: nuclear fac ( 566) 1489 222.2 2.7e-57 XP_016870230 (OMIM: 600728) PREDICTED: nuclear fac ( 415) 1469 219.3 1.4e-56 XP_016882326 (OMIM: 164005,602535,614753) PREDICTE ( 400) 1445 215.9 1.5e-55 XP_005259974 (OMIM: 164005,602535,614753) PREDICTE ( 520) 1405 210.3 9.2e-54 XP_006722823 (OMIM: 164005,602535,614753) PREDICTE ( 459) 1399 209.5 1.5e-53 XP_016870231 (OMIM: 600728) PREDICTED: nuclear fac ( 308) 645 103.0 1.1e-21 NP_001269716 (OMIM: 600728) nuclear factor 1 B-typ ( 309) 488 80.8 5.4e-15 XP_005251528 (OMIM: 600728) PREDICTED: nuclear fac ( 318) 488 80.8 5.5e-15 XP_016856852 (OMIM: 600727) PREDICTED: nuclear fac ( 271) 250 47.2 6.2e-05 >>NP_005588 (OMIM: 600729) nuclear factor 1 C-type isofo (428 aa) initn: 2912 init1: 2912 opt: 2912 Z-score: 2237.1 bits: 423.0 E(85289): 7.2e-118 Smith-Waterman score: 2912; 100.0% identity (100.0% similar) in 428 aa overlap (1-428:1-428) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 370 380 390 400 410 420 pF1KE1 PGPSWYLG :::::::: NP_005 PGPSWYLG >>XP_016882324 (OMIM: 600729) PREDICTED: nuclear factor (439 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 2205.6 bits: 417.2 E(85289): 4.1e-116 Smith-Waterman score: 2871; 100.0% identity (100.0% similar) in 423 aa overlap (1-423:1-423) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 370 380 390 400 410 420 pF1KE1 PGPSWYLG ::: XP_016 PGPPTLRPTRPLQTVPLWD 430 >>NP_001231933 (OMIM: 600729) nuclear factor 1 C-type is (439 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 2205.6 bits: 417.2 E(85289): 4.1e-116 Smith-Waterman score: 2871; 100.0% identity (100.0% similar) in 423 aa overlap (1-423:1-423) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 370 380 390 400 410 420 pF1KE1 PGPSWYLG ::: NP_001 PGPPTLRPTRPLQTVPLWD 430 >>NP_001231931 (OMIM: 600729) nuclear factor 1 C-type is (508 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 2204.7 bits: 417.2 E(85289): 4.6e-116 Smith-Waterman score: 2871; 100.0% identity (100.0% similar) in 423 aa overlap (1-423:1-423) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 370 380 390 400 410 420 pF1KE1 PGPSWYLG ::: NP_001 PGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEGGATSPTSPSYSPPD 430 440 450 460 470 480 >>XP_005259621 (OMIM: 600729) PREDICTED: nuclear factor (511 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 2204.6 bits: 417.2 E(85289): 4.6e-116 Smith-Waterman score: 2871; 100.0% identity (100.0% similar) in 423 aa overlap (1-423:1-423) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 370 380 390 400 410 420 pF1KE1 PGPSWYLG ::: XP_005 PGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEGGATSPTSPFLVSGI 430 440 450 460 470 480 >>XP_016882323 (OMIM: 600729) PREDICTED: nuclear factor (565 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 2203.9 bits: 417.3 E(85289): 5.1e-116 Smith-Waterman score: 2871; 100.0% identity (100.0% similar) in 423 aa overlap (1-423:1-423) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 370 380 390 400 410 420 pF1KE1 PGPSWYLG ::: XP_016 PGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEGGATSPTSPSYSPPD 430 440 450 460 470 480 >>XP_016882325 (OMIM: 600729) PREDICTED: nuclear factor (419 aa) initn: 2842 init1: 2842 opt: 2842 Z-score: 2183.8 bits: 413.1 E(85289): 6.7e-115 Smith-Waterman score: 2842; 100.0% identity (100.0% similar) in 418 aa overlap (11-428:2-419) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 360 370 380 390 400 410 pF1KE1 PGPSWYLG :::::::: XP_016 PGPSWYLG >>NP_001231934 (OMIM: 600729) nuclear factor 1 C-type is (430 aa) initn: 2801 init1: 2801 opt: 2801 Z-score: 2152.4 bits: 407.3 E(85289): 3.8e-113 Smith-Waterman score: 2801; 100.0% identity (100.0% similar) in 413 aa overlap (11-423:2-414) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 360 370 380 390 400 410 pF1KE1 PGPSWYLG ::: NP_001 PGPPTLRPTRPLQTVPLWD 420 430 >>NP_995315 (OMIM: 600729) nuclear factor 1 C-type isofo (499 aa) initn: 2801 init1: 2801 opt: 2801 Z-score: 2151.4 bits: 407.4 E(85289): 4.3e-113 Smith-Waterman score: 2801; 100.0% identity (100.0% similar) in 413 aa overlap (11-423:2-414) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_995 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 360 370 380 390 400 410 pF1KE1 PGPSWYLG ::: NP_995 PGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEGGATSPTSPSYSPPD 420 430 440 450 460 470 >>XP_006722822 (OMIM: 600729) PREDICTED: nuclear factor (556 aa) initn: 2801 init1: 2801 opt: 2801 Z-score: 2150.7 bits: 407.4 E(85289): 4.7e-113 Smith-Waterman score: 2801; 100.0% identity (100.0% similar) in 413 aa overlap (11-423:2-414) 10 20 30 40 50 60 pF1KE1 MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDE 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDC 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVV 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYY 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE1 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVH 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE1 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SGIARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQ 360 370 380 390 400 410 pF1KE1 PGPSWYLG ::: XP_006 PGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEGGATSPTSPSYSPPD 420 430 440 450 460 470 428 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:44:00 2016 done: Mon Nov 7 01:44:01 2016 Total Scan time: 10.440 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]