Result of FASTA (omim) for
pFN21AE1363
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1363, 585 aa
1>>>pF1KE1363 585 - 585 aa - 585 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2515+/-0.000393; mu= 5.8700+/- 0.025
mean_var=171.3187+/-34.092, 0's: 0 Z-trim(117.3): 12 B-trim: 0 in 0/53
Lambda= 0.097988
statistics sampled from 29169 (29181) to 29169 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.342), width: 16
Scan time: 8.810
The best scores are: opt bits E(85289)
NP_114414 (OMIM: 609234) eukaryotic translation in ( 585) 3956 571.7 2.2e-162
NP_001305974 (OMIM: 609234) eukaryotic translation ( 580) 3904 564.4 3.6e-160
NP_001305972 (OMIM: 609234) eukaryotic translation ( 560) 3552 514.6 3.4e-145
XP_011511526 (OMIM: 609234) PREDICTED: eukaryotic ( 542) 3431 497.5 4.6e-140
NP_001305973 (OMIM: 609234) eukaryotic translation ( 524) 2862 417.1 7.4e-116
NP_001305975 (OMIM: 609234) eukaryotic translation ( 371) 2447 358.3 2.6e-98
XP_011513903 (OMIM: 603917) PREDICTED: eukaryotic ( 775) 342 60.9 1.8e-08
NP_003742 (OMIM: 603917) eukaryotic translation in ( 814) 342 60.9 1.8e-08
XP_016868241 (OMIM: 603917) PREDICTED: eukaryotic ( 814) 342 60.9 1.8e-08
XP_011513901 (OMIM: 603917) PREDICTED: eukaryotic ( 814) 342 60.9 1.8e-08
NP_001032360 (OMIM: 603917) eukaryotic translation ( 814) 342 60.9 1.8e-08
XP_011513902 (OMIM: 603917) PREDICTED: eukaryotic ( 814) 342 60.9 1.8e-08
>>NP_114414 (OMIM: 609234) eukaryotic translation initia (585 aa)
initn: 3956 init1: 3956 opt: 3956 Z-score: 3036.1 bits: 571.7 E(85289): 2.2e-162
Smith-Waterman score: 3956; 99.8% identity (100.0% similar) in 585 aa overlap (1-585:1-585)
10 20 30 40 50 60
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
490 500 510 520 530 540
550 560 570 580
pF1KE1 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLKLGI
:::::::::::::::::::::::::::::::::::::::::.:::
NP_114 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI
550 560 570 580
>>NP_001305974 (OMIM: 609234) eukaryotic translation ini (580 aa)
initn: 3523 init1: 3523 opt: 3904 Z-score: 2996.4 bits: 564.4 E(85289): 3.6e-160
Smith-Waterman score: 3904; 98.8% identity (99.1% similar) in 585 aa overlap (1-585:1-580)
10 20 30 40 50 60
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGE---
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 --NVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE1 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE1 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE1 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
480 490 500 510 520 530
550 560 570 580
pF1KE1 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLKLGI
:::::::::::::::::::::::::::::::::::::::::.:::
NP_001 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI
540 550 560 570 580
>>NP_001305972 (OMIM: 609234) eukaryotic translation ini (560 aa)
initn: 3552 init1: 3552 opt: 3552 Z-score: 2727.7 bits: 514.6 E(85289): 3.4e-145
Smith-Waterman score: 3714; 95.6% identity (95.7% similar) in 585 aa overlap (1-585:1-560)
10 20 30 40 50 60
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
::::::::::::::::::::::::::::::::: ::
NP_001 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPR-------------------------VN
10 20 30
70 80 90 100 110 120
pF1KE1 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE1 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE1 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE1 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE1 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE1 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
460 470 480 490 500 510
550 560 570 580
pF1KE1 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLKLGI
:::::::::::::::::::::::::::::::::::::::::.:::
NP_001 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI
520 530 540 550 560
>>XP_011511526 (OMIM: 609234) PREDICTED: eukaryotic tran (542 aa)
initn: 3431 init1: 3431 opt: 3431 Z-score: 2635.5 bits: 497.5 E(85289): 4.6e-140
Smith-Waterman score: 3580; 92.5% identity (92.6% similar) in 585 aa overlap (1-585:1-542)
10 20 30 40 50 60
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
:::::::::::::::::::
XP_011 SKTALKNQRKHEAKKAAKQ-----------------------------------------
490
550 560 570 580
pF1KE1 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLKLGI
:::::::::::::::::::::::::::::::::::::::.:::
XP_011 --KLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI
500 510 520 530 540
>>NP_001305973 (OMIM: 609234) eukaryotic translation ini (524 aa)
initn: 2862 init1: 2862 opt: 2862 Z-score: 2201.0 bits: 417.1 E(85289): 7.4e-116
Smith-Waterman score: 3392; 89.4% identity (89.6% similar) in 585 aa overlap (1-585:1-524)
10 20 30 40 50 60
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWGNGEKVN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDVKTGTCL
:::::::::::::::::::::::::::::::::::::
NP_001 IISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYT-----------------------
70 80 90
130 140 150 160 170 180
pF1KE1 KSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQ
::::::::::::::::::::::
NP_001 --------------------------------------NTIANKLHLQKINDFVLSPGPQ
100 110
190 200 210 220 230 240
pF1KE1 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIAS
120 130 140 150 160 170
250 260 270 280 290 300
pF1KE1 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKAT
180 190 200 210 220 230
310 320 330 340 350 360
pF1KE1 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDS
240 250 260 270 280 290
370 380 390 400 410 420
pF1KE1 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGI
300 310 320 330 340 350
430 440 450 460 470 480
pF1KE1 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPL
360 370 380 390 400 410
490 500 510 520 530 540
pF1KE1 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNL
420 430 440 450 460 470
550 560 570 580
pF1KE1 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLKLGI
:::::::::::::::::::::::::::::::::::::::::.:::
NP_001 KKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI
480 490 500 510 520
>>NP_001305975 (OMIM: 609234) eukaryotic translation ini (371 aa)
initn: 2447 init1: 2447 opt: 2447 Z-score: 1886.1 bits: 358.3 E(85289): 2.6e-98
Smith-Waterman score: 2447; 99.7% identity (100.0% similar) in 366 aa overlap (220-585:6-371)
190 200 210 220 230 240
pF1KE1 GSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIASTDVDKTGAS
::::::::::::::::::::::::::::::
NP_001 MFQEVKADKVTMLWNKKATAVLVIASTDVDKTGAS
10 20 30
250 260 270 280 290 300
pF1KE1 YYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLKCDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLKCDPV
40 50 60 70 80 90
310 320 330 340 350 360
pF1KE1 FDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDG
100 110 120 130 140 150
370 380 390 400 410 420
pF1KE1 EHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGIFPAKTITYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGIFPAKTITYQ
160 170 180 190 200 210
430 440 450 460 470 480
pF1KE1 AVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPLSKTALKNQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPLSKTALKNQR
220 230 240 250 260 270
490 500 510 520 530 540
pF1KE1 KHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNLKKKLKAIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNLKKKLKAIEQ
280 290 300 310 320 330
550 560 570 580
pF1KE1 LKEQAATGKQLEKNQLEKIQKETALLQELEDLKLGI
::::::::::::::::::::::::::::::::.:::
NP_001 LKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI
340 350 360 370
>>XP_011513903 (OMIM: 603917) PREDICTED: eukaryotic tran (775 aa)
initn: 177 init1: 60 opt: 342 Z-score: 273.2 bits: 60.9 E(85289): 1.8e-08
Smith-Waterman score: 357; 24.3% identity (54.6% similar) in 403 aa overlap (25-415:296-667)
10 20 30 40 50
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWG
.::. : : : :. . : . : . ::
XP_011 QYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV--RWSPKGTYLATFHQRGIAL-WG
270 280 290 300 310 320
60 70 80 90 100 110
pF1KE1 NGEKVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDV
::: . : . :. . ..::: . :.:..: ..: .: ..:.
XP_011 -GEKFKQI--------QRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAII---IWDI
330 340 350 360 370
120 130 140 150 160 170
pF1KE1 KTGTCLKSFIQKKMQNWCP--SWSEDETLCARNVNNEVHFFENNNFNTIANK-LHLQKIN
:: ..: .. .: : .::.: . :: . . . ..:. ... . .: :... :.
XP_011 LTGHKKRGFHCESSAHW-PIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIK
380 390 400 410 420
180 190 200 210 220 230
pF1KE1 DFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKK
:: ::: . .: .:: .: :. : :.: :. . . ...:.. . :.:.
XP_011 DFSWSPGGN--IIAFWVPEDKDIPARVTLMQLPT----RQEIRVRNLFNVVDCKLHWQKN
430 440 450 460 470 480
240 250 260 270 280
pF1KE1 ATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAV----VQLPKNGPIYDVVWNSSSTE
. . : ::.: . : : : :. : :.. .. : .:. ....
XP_011 GDYLCV----KVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSK
490 500 510 520 530
290 300 310 320 330 340
pF1KE1 FCAVYGFMPAKATIF-----NLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQME
: ...: : .. : : : . . : :. ..::.:...::::. .. : .
XP_011 FAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALA
540 550 560 570 580 590
350 360 370 380 390 400
pF1KE1 VWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDV
:... ... .. : : :....:.. .:.:.: .: . : .:.: .
XP_011 FVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNN-
600 610 620 630 640 650
410 420 430 440 450 460
pF1KE1 PSNAELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLH
. .. :. :.:
XP_011 --KDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTM
660 670 680 690 700 710
>>NP_003742 (OMIM: 603917) eukaryotic translation initia (814 aa)
initn: 177 init1: 60 opt: 342 Z-score: 272.9 bits: 60.9 E(85289): 1.8e-08
Smith-Waterman score: 357; 24.3% identity (54.6% similar) in 403 aa overlap (25-415:335-706)
10 20 30 40 50
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWG
.::. : : : :. . : . : . ::
NP_003 QYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV--RWSPKGTYLATFHQRGIAL-WG
310 320 330 340 350 360
60 70 80 90 100 110
pF1KE1 NGEKVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDV
::: . : . :. . ..::: . :.:..: ..: .: ..:.
NP_003 -GEKFKQI--------QRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAII---IWDI
370 380 390 400
120 130 140 150 160 170
pF1KE1 KTGTCLKSFIQKKMQNWCP--SWSEDETLCARNVNNEVHFFENNNFNTIANK-LHLQKIN
:: ..: .. .: : .::.: . :: . . . ..:. ... . .: :... :.
NP_003 LTGHKKRGFHCESSAHW-PIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIK
410 420 430 440 450 460
180 190 200 210 220 230
pF1KE1 DFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKK
:: ::: . .: .:: .: :. : :.: :. . . ...:.. . :.:.
NP_003 DFSWSPGGN--IIAFWVPEDKDIPARVTLMQLPT----RQEIRVRNLFNVVDCKLHWQKN
470 480 490 500 510 520
240 250 260 270 280
pF1KE1 ATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAV----VQLPKNGPIYDVVWNSSSTE
. . : ::.: . : : : :. : :.. .. : .:. ....
NP_003 GDYLCV----KVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSK
530 540 550 560 570
290 300 310 320 330 340
pF1KE1 FCAVYGFMPAKATIF-----NLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQME
: ...: : .. : : : . . : :. ..::.:...::::. .. : .
NP_003 FAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALA
580 590 600 610 620 630
350 360 370 380 390 400
pF1KE1 VWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDV
:... ... .. : : :....:.. .:.:.: .: . : .:.: .
NP_003 FVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNN-
640 650 660 670 680 690
410 420 430 440 450 460
pF1KE1 PSNAELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLH
. .. :. :.:
NP_003 --KDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTM
700 710 720 730 740 750
>>XP_016868241 (OMIM: 603917) PREDICTED: eukaryotic tran (814 aa)
initn: 177 init1: 60 opt: 342 Z-score: 272.9 bits: 60.9 E(85289): 1.8e-08
Smith-Waterman score: 357; 24.3% identity (54.6% similar) in 403 aa overlap (25-415:335-706)
10 20 30 40 50
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWG
.::. : : : :. . : . : . ::
XP_016 QYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV--RWSPKGTYLATFHQRGIAL-WG
310 320 330 340 350 360
60 70 80 90 100 110
pF1KE1 NGEKVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDV
::: . : . :. . ..::: . :.:..: ..: .: ..:.
XP_016 -GEKFKQI--------QRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAII---IWDI
370 380 390 400
120 130 140 150 160 170
pF1KE1 KTGTCLKSFIQKKMQNWCP--SWSEDETLCARNVNNEVHFFENNNFNTIANK-LHLQKIN
:: ..: .. .: : .::.: . :: . . . ..:. ... . .: :... :.
XP_016 LTGHKKRGFHCESSAHW-PIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIK
410 420 430 440 450 460
180 190 200 210 220 230
pF1KE1 DFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKK
:: ::: . .: .:: .: :. : :.: :. . . ...:.. . :.:.
XP_016 DFSWSPGGN--IIAFWVPEDKDIPARVTLMQLPT----RQEIRVRNLFNVVDCKLHWQKN
470 480 490 500 510 520
240 250 260 270 280
pF1KE1 ATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAV----VQLPKNGPIYDVVWNSSSTE
. . : ::.: . : : : :. : :.. .. : .:. ....
XP_016 GDYLCV----KVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSK
530 540 550 560 570
290 300 310 320 330 340
pF1KE1 FCAVYGFMPAKATIF-----NLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQME
: ...: : .. : : : . . : :. ..::.:...::::. .. : .
XP_016 FAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALA
580 590 600 610 620 630
350 360 370 380 390 400
pF1KE1 VWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDV
:... ... .. : : :....:.. .:.:.: .: . : .:.: .
XP_016 FVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNN-
640 650 660 670 680 690
410 420 430 440 450 460
pF1KE1 PSNAELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLH
. .. :. :.:
XP_016 --KDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTM
700 710 720 730 740 750
>>XP_011513901 (OMIM: 603917) PREDICTED: eukaryotic tran (814 aa)
initn: 177 init1: 60 opt: 342 Z-score: 272.9 bits: 60.9 E(85289): 1.8e-08
Smith-Waterman score: 357; 24.3% identity (54.6% similar) in 403 aa overlap (25-415:335-706)
10 20 30 40 50
pF1KE1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRESGKNCKVCIFSKDGTLFAWG
.::. : : : :. . : . : . ::
XP_011 QYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV--RWSPKGTYLATFHQRGIAL-WG
310 320 330 340 350 360
60 70 80 90 100 110
pF1KE1 NGEKVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAGIPNLQLYDV
::: . : . :. . ..::: . :.:..: ..: .: ..:.
XP_011 -GEKFKQI--------QRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAII---IWDI
370 380 390 400
120 130 140 150 160 170
pF1KE1 KTGTCLKSFIQKKMQNWCP--SWSEDETLCARNVNNEVHFFENNNFNTIANK-LHLQKIN
:: ..: .. .: : .::.: . :: . . . ..:. ... . .: :... :.
XP_011 LTGHKKRGFHCESSAHW-PIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIK
410 420 430 440 450 460
180 190 200 210 220 230
pF1KE1 DFVLSPGPQPYKVAVYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKK
:: ::: . .: .:: .: :. : :.: :. . . ...:.. . :.:.
XP_011 DFSWSPGGN--IIAFWVPEDKDIPARVTLMQLPT----RQEIRVRNLFNVVDCKLHWQKN
470 480 490 500 510 520
240 250 260 270 280
pF1KE1 ATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAV----VQLPKNGPIYDVVWNSSSTE
. . : ::.: . : : : :. : :.. .. : .:. ....
XP_011 GDYLCV----KVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSK
530 540 550 560 570
290 300 310 320 330 340
pF1KE1 FCAVYGFMPAKATIF-----NLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQME
: ...: : .. : : : . . : :. ..::.:...::::. .. : .
XP_011 FAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALA
580 590 600 610 620 630
350 360 370 380 390 400
pF1KE1 VWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDV
:... ... .. : : :....:.. .:.:.: .: . : .:.: .
XP_011 FVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRLLQKNN-
640 650 660 670 680 690
410 420 430 440 450 460
pF1KE1 PSNAELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLH
. .. :. :.:
XP_011 --KDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTM
700 710 720 730 740 750
585 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:48:07 2016 done: Mon Nov 7 01:48:09 2016
Total Scan time: 8.810 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]