Result of FASTA (ccds) for
pFN21AE5601
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5601, 484 aa
1>>>pF1KE5601 484 - 484 aa - 484 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6257+/-0.00073; mu= 16.9572+/- 0.044
mean_var=75.1162+/-14.937, 0's: 0 Z-trim(109.9): 19 B-trim: 0 in 0/53
Lambda= 0.147982
statistics sampled from 11163 (11181) to 11163 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.343), width: 16
Scan time: 2.930
The best scores are: opt bits E(32554)
CCDS8144.1 CTSF gene_id:8722|Hs108|chr11 ( 484) 3292 712.0 3.6e-205
CCDS8117.1 CTSW gene_id:1521|Hs108|chr11 ( 376) 689 156.2 5.6e-38
CCDS10308.1 CTSH gene_id:1512|Hs108|chr15 ( 335) 669 151.9 9.9e-37
CCDS6675.1 CTSL gene_id:1514|Hs108|chr9 ( 333) 664 150.8 2.1e-36
CCDS6723.1 CTSV gene_id:1515|Hs108|chr9 ( 334) 641 145.9 6.2e-35
CCDS969.1 CTSK gene_id:1513|Hs108|chr1 ( 329) 587 134.4 1.8e-31
CCDS3794.1 CTSO gene_id:1519|Hs108|chr4 ( 321) 568 130.3 3e-30
CCDS968.1 CTSS gene_id:1520|Hs108|chr1 ( 331) 564 129.5 5.5e-30
CCDS55634.1 CTSS gene_id:1520|Hs108|chr1 ( 281) 453 105.7 6.5e-23
>>CCDS8144.1 CTSF gene_id:8722|Hs108|chr11 (484 aa)
initn: 3292 init1: 3292 opt: 3292 Z-score: 3797.0 bits: 712.0 E(32554): 3.6e-205
Smith-Waterman score: 3292; 100.0% identity (100.0% similar) in 484 aa overlap (1-484:1-484)
10 20 30 40 50 60
pF1KE5 MAPWLQLLSLLGLLPGAVAAPAQPRAASFQAWGPPSPELLAPTRFALEMFNRGRAAGTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MAPWLQLLSLLGLLPGAVAAPAQPRAASFQAWGPPSPELLAPTRFALEMFNRGRAAGTRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VLGLVRGRVRRAGQGSLYSLEATLEEPPCNDPMVCRLPVSKKTLLCSFQVLDELGRHVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VLGLVRGRVRRAGQGSLYSLEATLEEPPCNDPMVCRLPVSKKTLLCSFQVLDELGRHVLL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 RKDCGPVDTKVPGAGEPKSAFTQGSAMISSLSQNHPDNRNETFSSVISLLNEDPLSQDLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RKDCGPVDTKVPGAGEPKSAFTQGSAMISSLSQNHPDNRNETFSSVISLLNEDPLSQDLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 VKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 EEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 TGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 RPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASS
430 440 450 460 470 480
pF1KE5 AVVD
::::
CCDS81 AVVD
>>CCDS8117.1 CTSW gene_id:1521|Hs108|chr11 (376 aa)
initn: 771 init1: 228 opt: 689 Z-score: 795.3 bits: 156.2 E(32554): 5.6e-38
Smith-Waterman score: 815; 38.3% identity (66.4% similar) in 342 aa overlap (174-483:25-363)
150 160 170 180 190
pF1KE5 GSAMISSLSQNHPDNRNETFSSVISLLNEDPL-SQDL---PVKMASIFKNFVITYNRTYE
:: .::: :... :: : : .::.:
CCDS81 MALTAHPSCLLALLVAGLAQGIRGPLRAQDLGPQPLELKEAFKLFQIQFNRSYL
10 20 30 40 50
200 210 220 230 240 250
pF1KE5 SKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGN
: :: ::..:..:...::..: : :::..::: ::::::::: .: :. :.
CCDS81 SPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQLYG---YRRAAGG
60 70 80 90 100 110
260 270 280 290 300 310
pF1KE5 KMKQAKSVGDLAPPEW-----DWRS-KGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQG
.... . . : : :::. .:.. .::: :. :::....::.: : ..
CCDS81 VPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFW
120 130 140 150 160 170
320 330 340 350 360 370
pF1KE5 TLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQS--CNFSAE
....: :::::: . .: ::. .:. .. : .:: .: :: .::.... :. .
CCDS81 DFVDVSVQELLDCGRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKY
180 190 200 210 220 230
380 390 400 410 420 430
pF1KE5 KAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDH
. ..:.: . :..::...: .:: :::.:.:: .:.::.:. . :.: :.::
CCDS81 QKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDH
240 250 260 270 280 290
440 450 460 470
pF1KE5 AVLLVGYGN-RSD-------------------VPFWAIKNSWGTDWGEKGYYYLHRGSGA
.:::::.:. .:. .:.: .:::::..::::::. :::::..
CCDS81 SVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNT
300 310 320 330 340 350
480
pF1KE5 CGVNTMASSAVVD
::.. . .: :
CCDS81 CGITKFPLTARVQKPDMKPRVSCPP
360 370
>>CCDS10308.1 CTSH gene_id:1512|Hs108|chr15 (335 aa)
initn: 543 init1: 237 opt: 669 Z-score: 772.9 bits: 151.9 E(32554): 9.9e-37
Smith-Waterman score: 669; 36.6% identity (67.3% similar) in 303 aa overlap (187-482:35-332)
160 170 180 190 200 210
pF1KE5 DNRNETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMV
::... . .:: : :: . ::..:..:
CCDS10 LPLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTY-STEEYHHRLQTFASNW-
10 20 30 40 50 60
220 230 240 250 260 270
pF1KE5 RAQKIQALDRG--TAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPE
.::.: . : : ......:::.. :.. :: . .. ..: . ...: ::
CCDS10 --RKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY-PPS
70 80 90 100 110
280 290 300 310 320 330
pF1KE5 WDWRSKGA-VTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDC--DKMDK
:::.:: :. ::.:: :::::.::.:: .:. . : .:::.::.:.:: : ..
CCDS10 VDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNH
120 130 140 150 160 170
340 350 360 370 380 390
pF1KE5 ACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELS-QNEQKL
.:.:::::.:. : :. :: : :::. :.:. :: ...: .... .:. .
CCDS10 GCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAM
180 190 200 210 220 230
400 410 420 430 440
pF1KE5 AAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAI
. .: .:.: :... ...:: :: .: ..:::: ::::... .:.: .
CCDS10 VEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIV
240 250 260 270 280 290
450 460 470 480
pF1KE5 KNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD
::::: .:: .::. ..::.. ::. . :: .
CCDS10 KNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV
300 310 320 330
>>CCDS6675.1 CTSL gene_id:1514|Hs108|chr9 (333 aa)
initn: 632 init1: 264 opt: 664 Z-score: 767.2 bits: 150.8 E(32554): 2.1e-36
Smith-Waterman score: 664; 39.7% identity (65.6% similar) in 305 aa overlap (194-483:36-333)
170 180 190 200 210 220
pF1KE5 SSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ-KIQ
.:: : .::. :: .:. .:: . . :
CCDS66 ILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEG-WRRAVWEKNMKMIELHNQ
10 20 30 40 50 60
230 240 250 260 270 280
pF1KE5 ALDRGTAQY--GVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSK
.: .. ... :.:.: :::: .. . :: .:. : . :: ::: :
CCDS66 EYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE-APRSVDWREK
70 80 90 100 110 120
290 300 310 320 330
pF1KE5 GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD--KMDKACMGGLP
: :: ::.::.::::::::.:: .::: : . : :.:::::.:.::. . ...: :::
CCDS66 GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLM
130 140 150 160 170 180
340 350 360 370 380 390
pF1KE5 SNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDS--VELSQNEQKLAAWLAK
. :.. ... :::..:..: :.. .::... : .: ::. :.. ..:. : .:
CCDS66 DYAFQYVQDNGGLDSEESYPYEATEESCKYNP-KYSV-ANDTGFVDIPKQEKALMKAVAT
190 200 210 220 230 240
400 410 420 430 440
pF1KE5 RGPISVAINAFGMQ---FYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS----DVPFWAI
:::::::.: : . ::..:: ..: :: .::.::.:::: .: . .: .
CCDS66 VGPISVAIDA-GHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLV
250 260 270 280 290
450 460 470 480
pF1KE5 KNSWGTDWGEKGYYYLHRGS-GACGVNTMASSAVVD
::::: .:: :: . . . ::. . :: .:
CCDS66 KNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
300 310 320 330
>>CCDS6723.1 CTSV gene_id:1515|Hs108|chr9 (334 aa)
initn: 541 init1: 249 opt: 641 Z-score: 740.6 bits: 145.9 E(32554): 6.2e-35
Smith-Waterman score: 641; 38.6% identity (64.7% similar) in 306 aa overlap (193-479:35-330)
170 180 190 200 210 220
pF1KE5 FSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQ
:. : : ..::. :: .:. .:: . ...
CCDS67 LVLAAFCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEG-WRRAVWEKNM-KMIELH
10 20 30 40 50 60
230 240 250 260 270
pF1KE5 ALDRGTAQYGVT----KFSDLTEEEFRTI---YLNTLLRKEPGNKMKQAKSVGDLAPPEW
. . ...: : :.:.:.:::: . . : .:: .:. . :: :
CCDS67 NGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRK---GKVFREPLFLDL-PKSV
70 80 90 100 110
280 290 300 310 320 330
pF1KE5 DWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKAC
:::.:: :: ::.: .::::::::.:: .::: : . : :.:::::.:.::.. ...:
CCDS67 DWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGC
120 130 140 150 160 170
340 350 360 370 380 390
pF1KE5 MGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDS---VELSQNEQKL
::. . :.. .:. :::..:..: : . . :.. :.. ::. : .:. :
CCDS67 NGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENS--VANDTGFTVVAPGKEKAL
180 190 200 210 220 230
400 410 420 430 440
pF1KE5 AAWLAKRGPISVAINA--FGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYG----NRSDV
.: ::::::..: ..:::. :: ..: :: .::.::.:::: : ..
CCDS67 MKAVATVGPISVAMDAGHSSFQFYKSGIY--FEPDCSSKNLDHGVLVVGYGFEGANSNNS
240 250 260 270 280 290
450 460 470 480
pF1KE5 PFWAIKNSWGTDWGEKGYYYLHRGSGA-CGVNTMASSAVVD
.: .::::: .:: .:: . . .. ::. : ::
CCDS67 KYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV
300 310 320 330
>>CCDS969.1 CTSK gene_id:1513|Hs108|chr1 (329 aa)
initn: 583 init1: 326 opt: 587 Z-score: 678.4 bits: 134.4 E(32554): 1.8e-31
Smith-Waterman score: 588; 35.2% identity (62.2% similar) in 304 aa overlap (193-479:32-325)
170 180 190 200 210 220
pF1KE5 FSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNM--VRAQK
:. . :..: . : .. .:. . ..
CCDS96 WGLKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHN
10 20 30 40 50 60
230 240 250 260 270
pF1KE5 IQA-LDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNK--MKQAKSVGDLAPPEW--
..: : : . ......:.: :: ...: : : .....: : :::
CCDS96 LEASLGVHTYELAMNHLGDMTSEE--------VVQKMTGLKVPLSHSRSNDTLYIPEWEG
70 80 90 100 110
280 290 300 310 320
pF1KE5 ------DWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM
:.:.:: :: ::.::.:::::::: .: .::: . : ::.:: :.:.:: .
CCDS96 RAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE
120 130 140 150 160 170
330 340 350 360 370 380
pF1KE5 DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQ-NEQ
. .: :: .::.. ... :...:: : : :. .:: .. . :. . ::.
CCDS96 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK
180 190 200 210 220 230
390 400 410 420 430 440
pF1KE5 KLAAWLAKRGPISVAINA--FGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPF
: .:. ::.::::.: ..::: .:. :. ..:::: :::: ..
CCDS96 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDES--CNSDNLNHAVLAVGYGIQKGNKH
240 250 260 270 280 290
450 460 470 480
pF1KE5 WAIKNSWGTDWGEKGYYYLHRG-SGACGVNTMASSAVVD
: :::::: .::.::: . :. ..:::. ..::
CCDS96 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
300 310 320
>>CCDS3794.1 CTSO gene_id:1519|Hs108|chr4 (321 aa)
initn: 488 init1: 232 opt: 568 Z-score: 656.7 bits: 130.3 E(32554): 3e-30
Smith-Waterman score: 568; 33.1% identity (64.9% similar) in 299 aa overlap (190-483:29-321)
160 170 180 190 200 210
pF1KE5 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ
:. :. :. : .: : .: : .: .
CCDS37 MDVRALPWLPWLLWLLCRGGGDADSRAPFTPTWPRSRE-REAAAFRES--LNRHRYLN
10 20 30 40 50
220 230 240 250 260 270
pF1KE5 KIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPP-EWDWR
.. . .:: ::...:: : :::..::: . : : . . :. ... : ..:::
CCDS37 SLFPSENSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWR
60 70 80 90 100 110
280 290 300 310 320 330
pF1KE5 SKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLP
.: .::.:..: :::.::::::.: ::. . .. : .:: :...::. . .: ::
CCDS37 DKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGST
120 130 140 150 160 170
340 350 360 370 380 390
pF1KE5 SNAYSAIKNLG-GLETEDDYSYQGHMQSCN-FSAEKAKVYIN--DSVELSQNEQKLAAWL
:: . .... : ...: .... :. ::. .. :. .. ..:..:...: :
CCDS37 LNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKAL
180 190 200 210 220 230
400 410 420 430 440 450
pF1KE5 AKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWG
::. : ..: . : : :: .. :: .::::..:. . ...:.: ..::::
CCDS37 LTFGPLVVIVDAVSWQDYLGGI---IQHHCSSGEANHAVLITGFDKTGSTPYWIVRNSWG
240 250 260 270 280 290
460 470 480
pF1KE5 TDWGEKGYYYLHRGSGACGVNTMASSAVVD
..:: :: ... ::..::. .:: :
CCDS37 SSWGVDGYAHVKMGSNVCGIADSVSSIFV
300 310 320
>>CCDS968.1 CTSS gene_id:1520|Hs108|chr1 (331 aa)
initn: 380 init1: 222 opt: 564 Z-score: 651.9 bits: 129.5 E(32554): 5.5e-30
Smith-Waterman score: 564; 31.3% identity (65.3% similar) in 326 aa overlap (164-479:12-327)
140 150 160 170 180 190
pF1KE5 AGEPKSAFTQGSAMISSLSQNHPDNRNETFSSVISLLNEDPLSQDLPVKMASIFKNFVIT
::... :..:: . : . ..:. :
CCDS96 MKRLVCVLLVCSSAVAQLHKDP-TLD---HHWHLWKK---T
10 20 30
200 210 220 230 240 250
pF1KE5 YNRTYESKEEARWRLSVFVNNM--VRAQKIQ-ALDRGTAQYGVTKFSDLTEEEFRTIYLN
:.. :. :.: : .. .:. : .... .. . . :.....:.: :: ... .
CCDS96 YGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSS
40 50 60 70 80 90
260 270 280 290 300 310
pF1KE5 TLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFL
. .. .. .. . . : ::: :: ::.:: :: ::.:::::..: .:.: :
CCDS96 LRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKL
100 110 120 130 140 150
320 330 340 350 360
pF1KE5 NQGTLLSLSEQELLDC--DKM-DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCN
. : :.::: :.:.:: .:. .:.: ::. ..:.. : . :.... .: :.. :.:.
CCDS96 KTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQ
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE5 FSAEKAKVYINDSVELSQN-EQKLAAWLAKRGPISVAINAFGMQF--YRHGISRPLRPLC
.... . . .:: . :. : .:..::.::...: .: :: :. .: :
CCDS96 YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVY--YEPSC
220 230 240 250 260 270
430 440 450 460 470 480
pF1KE5 SPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGA-CGVNTMASSAVV
. ..:.::.::::. . .: .::::: ..::.:: . :..: ::. .. :
CCDS96 TQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
280 290 300 310 320 330
pF1KE5 D
>>CCDS55634.1 CTSS gene_id:1520|Hs108|chr1 (281 aa)
initn: 344 init1: 162 opt: 453 Z-score: 524.8 bits: 105.7 E(32554): 6.5e-23
Smith-Waterman score: 453; 36.2% identity (69.3% similar) in 199 aa overlap (288-479:82-277)
260 270 280 290 300 310
pF1KE5 GNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLS
:.: ::.:::::..: .:.: :. : :.:
CCDS55 WEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMGSCGACWAFSAVGALEAQLKLKTGKLVS
60 70 80 90 100 110
320 330 340 350 360 370
pF1KE5 LSEQELLDC--DKM-DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAK
:: :.:.:: .:. .:.: ::. ..:.. : . :.... .: :.. :.:.....
CCDS55 LSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRA
120 130 140 150 160 170
380 390 400 410 420 430
pF1KE5 VYINDSVELSQN-EQKLAAWLAKRGPISVAINAFGMQF--YRHGISRPLRPLCSPWLIDH
. . .:: . :. : .:..::.::...: .: :: :. .: :. ..:
CCDS55 ATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVY--YEPSCTQN-VNH
180 190 200 210 220
440 450 460 470 480
pF1KE5 AVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGA-CGVNTMASSAVVD
.::.::::. . .: .::::: ..::.:: . :..: ::. .. :
CCDS55 GVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
230 240 250 260 270 280
484 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:01:47 2016 done: Tue Nov 8 05:01:47 2016
Total Scan time: 2.930 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]