Result of FASTA (omim) for pFN21AE3933
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3933, 221 aa
  1>>>pF1KE3933 221 - 221 aa - 221 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5576+/-0.000267; mu= 16.5739+/- 0.017
 mean_var=149.1584+/-30.940, 0's: 0 Z-trim(123.9): 169  B-trim: 0 in 0/57
 Lambda= 0.105015
 statistics sampled from 44440 (44635) to 44440 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.834), E-opt: 0.2 (0.523), width:  16
 Scan time:  6.750

The best scores are:                                      opt bits E(85289)
XP_016865393 (OMIM: 609315) PREDICTED: tripartite  ( 221) 1525 241.3 9.4e-64
NP_203128 (OMIM: 609315) tripartite motif-containi ( 221) 1525 241.3 9.4e-64
NP_976038 (OMIM: 609315) tripartite motif-containi ( 511) 1418 225.6 1.2e-58
NP_963921 (OMIM: 610530) E3 ubiquitin-protein liga ( 518)  305 57.0 6.7e-08
XP_006714995 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 520)  305 57.0 6.8e-08
XP_006714994 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 525)  305 57.0 6.8e-08
XP_006714993 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 541)  305 57.0 6.9e-08
XP_006714992 (OMIM: 610530) PREDICTED: E3 ubiquiti ( 543)  305 57.0 6.9e-08
NP_291027 (OMIM: 610530) E3 ubiquitin-protein liga ( 630)  305 57.1 7.6e-08
XP_016856907 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262)  293 54.8 1.6e-07
XP_016856908 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262)  293 54.8 1.6e-07
NP_001128327 (OMIM: 606123) E3 ubiquitin-protein l ( 343)  293 54.9 1.9e-07
XP_011542512 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477)  293 55.1 2.3e-07
NP_057186 (OMIM: 606123) E3 ubiquitin-protein liga ( 477)  293 55.1 2.3e-07
NP_001020111 (OMIM: 606123) E3 ubiquitin-protein l ( 477)  293 55.1 2.3e-07
XP_011542511 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477)  293 55.1 2.3e-07
XP_006711842 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477)  293 55.1 2.3e-07
NP_060543 (OMIM: 613184) E3 ubiquitin-protein liga ( 485)  260 50.1 7.3e-06
NP_258411 (OMIM: 611041) tripartite motif-containi ( 638)  251 49.0 2.2e-05
NP_006501 (OMIM: 602165) zinc finger protein RFP [ ( 513)  249 48.5 2.4e-05
XP_016866815 (OMIM: 607524) PREDICTED: RING finger ( 230)  235 45.9 6.5e-05
NP_739575 (OMIM: 607524) RING finger protein 39 is ( 354)  235 46.2 8.4e-05
NP_079512 (OMIM: 607524) RING finger protein 39 is ( 420)  235 46.3 9.3e-05
NP_003132 (OMIM: 109092) E3 ubiquitin-protein liga ( 475)  233 46.0 0.00012
NP_742013 (OMIM: 605700) E3 ubiquitin-protein liga ( 488)  224 44.7 0.00032
NP_067076 (OMIM: 605700) E3 ubiquitin-protein liga ( 518)  224 44.7 0.00033
NP_477514 (OMIM: 607564) tripartite motif-containi ( 488)  222 44.4  0.0004
NP_001003818 (OMIM: 607564) tripartite motif-conta ( 516)  222 44.4 0.00041
NP_660215 (OMIM: 607868) E3 ubiquitin-protein liga ( 468)  219 43.9 0.00053
XP_011542587 (OMIM: 607868) PREDICTED: E3 ubiquiti ( 391)  214 43.1 0.00081
XP_011542513 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 450)  214 43.1 0.00088
XP_016857901 (OMIM: 607868) PREDICTED: E3 ubiquiti ( 467)  214 43.2  0.0009
NP_569074 (OMIM: 605684) tripartite motif-containi ( 270)  198 40.4  0.0035
NP_067629 (OMIM: 605684) tripartite motif-containi ( 488)  198 40.8  0.0049
NP_001003827 (OMIM: 605684) tripartite motif-conta ( 488)  198 40.8  0.0049
NP_908975 (OMIM: 606469) tripartite motif-containi ( 241)  193 39.6  0.0055
NP_908974 (OMIM: 606469) tripartite motif-containi ( 452)  193 40.0   0.008
XP_011515918 (OMIM: 606469) PREDICTED: tripartite  ( 452)  193 40.0   0.008
NP_149047 (OMIM: 606469) tripartite motif-containi ( 540)  193 40.1  0.0089
XP_011515917 (OMIM: 606469) PREDICTED: tripartite  ( 540)  193 40.1  0.0089
XP_005251373 (OMIM: 606469) PREDICTED: tripartite  ( 547)  193 40.1  0.0089
NP_908973 (OMIM: 606469) tripartite motif-containi ( 548)  193 40.1  0.0089
XP_011515915 (OMIM: 606469) PREDICTED: tripartite  ( 548)  193 40.1  0.0089
XP_011515916 (OMIM: 606469) PREDICTED: tripartite  ( 548)  193 40.1  0.0089


>>XP_016865393 (OMIM: 609315) PREDICTED: tripartite moti  (221 aa)
 initn: 1525 init1: 1525 opt: 1525  Z-score: 1265.6  bits: 241.3 E(85289): 9.4e-64
Smith-Waterman score: 1525; 99.5% identity (100.0% similar) in 221 aa overlap (1-221:1-221)

               10        20        30        40        50        60
pF1KE3 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRELAAVATLLRRFSLPAAAPGEHGSQA
       ::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_016 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 LRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPWDITEA
       :::::::::::::::::::::::::::::::::::::::::
XP_016 LRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPWDITEA
              190       200       210       220 

>>NP_203128 (OMIM: 609315) tripartite motif-containing p  (221 aa)
 initn: 1525 init1: 1525 opt: 1525  Z-score: 1265.6  bits: 241.3 E(85289): 9.4e-64
Smith-Waterman score: 1525; 99.5% identity (100.0% similar) in 221 aa overlap (1-221:1-221)

               10        20        30        40        50        60
pF1KE3 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRELAAVATLLRRFSLPAAAPGEHGSQA
       ::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_203 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 LRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPWDITEA
       :::::::::::::::::::::::::::::::::::::::::
NP_203 LRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPWDITEA
              190       200       210       220 

>>NP_976038 (OMIM: 609315) tripartite motif-containing p  (511 aa)
 initn: 1438 init1: 1418 opt: 1418  Z-score: 1174.2  bits: 225.6 E(85289): 1.2e-58
Smith-Waterman score: 1418; 98.1% identity (99.5% similar) in 210 aa overlap (1-210:1-210)

               10        20        30        40        50        60
pF1KE3 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRELAAVATLLRRFSLPAAAPGEHGSQA
       ::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_976 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_976 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
              130       140       150       160       170       180

              190       200       210       220                    
pF1KE3 LRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPWDITEA                   
       :::::::::::::::::::::::::: ..:                              
NP_976 LRVLKKELEDCEVFRSTEKKESKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEE
              190       200       210       220       230       240

>>NP_963921 (OMIM: 610530) E3 ubiquitin-protein ligase T  (518 aa)
 initn: 467 init1: 229 opt: 305  Z-score: 262.8  bits: 57.0 E(85289): 6.7e-08
Smith-Waterman score: 305; 37.4% identity (67.6% similar) in 139 aa overlap (72-205:172-302)

              50        60        70             80        90      
pF1KE3 VECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLP-----CPQCREPARPSQLRPNREL
                                     :: : :     :::::.     ..::: .:
NP_963 EEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQL
             150       160       170       180       190       200 

        100       110       120       130       140       150      
pF1KE3 AAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAR
       : .. ..:..  :.  ::. ::...        : .: : .::.:. : .:::::: ..:
NP_963 ANMVQVIRQMH-PT--PGR-GSRVTDQGI----CPKHQEALKLFCEVDEEAICVVCRESR
             210           220           230       240       250   

        160       170       180       190       200       210      
pF1KE3 EHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPW
        :..:.:.::.:.::: :  :..... :.:.::  . ... :...  ::           
NP_963 SHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAV
           260       270       280       290       300       310   

        220                                                        
pF1KE3 DITEA                                                       
                                                                   
NP_963 ASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQ
           320       330       340       350       360       370   

>>XP_006714995 (OMIM: 610530) PREDICTED: E3 ubiquitin-pr  (520 aa)
 initn: 467 init1: 229 opt: 305  Z-score: 262.8  bits: 57.0 E(85289): 6.8e-08
Smith-Waterman score: 305; 37.4% identity (67.6% similar) in 139 aa overlap (72-205:172-302)

              50        60        70             80        90      
pF1KE3 VECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLP-----CPQCREPARPSQLRPNREL
                                     :: : :     :::::.     ..::: .:
XP_006 EEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQL
             150       160       170       180       190       200 

        100       110       120       130       140       150      
pF1KE3 AAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAR
       : .. ..:..  :.  ::. ::...        : .: : .::.:. : .:::::: ..:
XP_006 ANMVQVIRQMH-PT--PGR-GSRVTDQGI----CPKHQEALKLFCEVDEEAICVVCRESR
             210           220           230       240       250   

        160       170       180       190       200       210      
pF1KE3 EHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPW
        :..:.:.::.:.::: :  :..... :.:.::  . ... :...  ::           
XP_006 SHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAV
           260       270       280       290       300       310   

        220                                                        
pF1KE3 DITEA                                                       
                                                                   
XP_006 ASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQ
           320       330       340       350       360       370   

>>XP_006714994 (OMIM: 610530) PREDICTED: E3 ubiquitin-pr  (525 aa)
 initn: 467 init1: 229 opt: 305  Z-score: 262.7  bits: 57.0 E(85289): 6.8e-08
Smith-Waterman score: 305; 37.4% identity (67.6% similar) in 139 aa overlap (72-205:172-302)

              50        60        70             80        90      
pF1KE3 VECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLP-----CPQCREPARPSQLRPNREL
                                     :: : :     :::::.     ..::: .:
XP_006 EEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQL
             150       160       170       180       190       200 

        100       110       120       130       140       150      
pF1KE3 AAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAR
       : .. ..:..  :.  ::. ::...        : .: : .::.:. : .:::::: ..:
XP_006 ANMVQVIRQMH-PT--PGR-GSRVTDQGI----CPKHQEALKLFCEVDEEAICVVCRESR
             210           220           230       240       250   

        160       170       180       190       200       210      
pF1KE3 EHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPW
        :..:.:.::.:.::: :  :..... :.:.::  . ... :...  ::           
XP_006 SHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAV
           260       270       280       290       300       310   

        220                                                        
pF1KE3 DITEA                                                       
                                                                   
XP_006 ASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQ
           320       330       340       350       360       370   

>>XP_006714993 (OMIM: 610530) PREDICTED: E3 ubiquitin-pr  (541 aa)
 initn: 467 init1: 229 opt: 305  Z-score: 262.6  bits: 57.0 E(85289): 6.9e-08
Smith-Waterman score: 305; 37.4% identity (67.6% similar) in 139 aa overlap (72-205:172-302)

              50        60        70             80        90      
pF1KE3 VECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLP-----CPQCREPARPSQLRPNREL
                                     :: : :     :::::.     ..::: .:
XP_006 EEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQL
             150       160       170       180       190       200 

        100       110       120       130       140       150      
pF1KE3 AAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAR
       : .. ..:..  :.  ::. ::...        : .: : .::.:. : .:::::: ..:
XP_006 ANMVQVIRQMH-PT--PGR-GSRVTDQGI----CPKHQEALKLFCEVDEEAICVVCRESR
             210           220           230       240       250   

        160       170       180       190       200       210      
pF1KE3 EHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPW
        :..:.:.::.:.::: :  :..... :.:.::  . ... :...  ::           
XP_006 SHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAV
           260       270       280       290       300       310   

        220                                                        
pF1KE3 DITEA                                                       
                                                                   
XP_006 ASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQ
           320       330       340       350       360       370   

>>XP_006714992 (OMIM: 610530) PREDICTED: E3 ubiquitin-pr  (543 aa)
 initn: 467 init1: 229 opt: 305  Z-score: 262.6  bits: 57.0 E(85289): 6.9e-08
Smith-Waterman score: 305; 37.4% identity (67.6% similar) in 139 aa overlap (72-205:172-302)

              50        60        70             80        90      
pF1KE3 VECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLP-----CPQCREPARPSQLRPNREL
                                     :: : :     :::::.     ..::: .:
XP_006 EEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQL
             150       160       170       180       190       200 

        100       110       120       130       140       150      
pF1KE3 AAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAR
       : .. ..:..  :.  ::. ::...        : .: : .::.:. : .:::::: ..:
XP_006 ANMVQVIRQMH-PT--PGR-GSRVTDQGI----CPKHQEALKLFCEVDEEAICVVCRESR
             210           220           230       240       250   

        160       170       180       190       200       210      
pF1KE3 EHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPW
        :..:.:.::.:.::: :  :..... :.:.::  . ... :...  ::           
XP_006 SHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAV
           260       270       280       290       300       310   

        220                                                        
pF1KE3 DITEA                                                       
                                                                   
XP_006 ASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQ
           320       330       340       350       360       370   

>>NP_291027 (OMIM: 610530) E3 ubiquitin-protein ligase T  (630 aa)
 initn: 467 init1: 229 opt: 305  Z-score: 261.9  bits: 57.1 E(85289): 7.6e-08
Smith-Waterman score: 305; 37.4% identity (67.6% similar) in 139 aa overlap (72-205:172-302)

              50        60        70             80        90      
pF1KE3 VECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLP-----CPQCREPARPSQLRPNREL
                                     :: : :     :::::.     ..::: .:
NP_291 EEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQL
             150       160       170       180       190       200 

        100       110       120       130       140       150      
pF1KE3 AAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAR
       : .. ..:..  :.  ::. ::...        : .: : .::.:. : .:::::: ..:
NP_291 ANMVQVIRQMH-PT--PGR-GSRVTDQGI----CPKHQEALKLFCEVDEEAICVVCRESR
             210           220           230       240       250   

        160       170       180       190       200       210      
pF1KE3 EHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPW
        :..:.:.::.:.::: :  :..... :.:.::  . ... :...  ::           
NP_291 SHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAV
           260       270       280       290       300       310   

        220                                                        
pF1KE3 DITEA                                                       
                                                                   
NP_291 ASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQ
           320       330       340       350       360       370   

>>XP_016856907 (OMIM: 606123) PREDICTED: E3 ubiquitin-pr  (262 aa)
 initn: 486 init1: 209 opt: 293  Z-score: 256.0  bits: 54.8 E(85289): 1.6e-07
Smith-Waterman score: 468; 41.6% identity (60.5% similar) in 190 aa overlap (15-204:2-173)

               10        20        30        40        50        60
pF1KE3 MAAVGPRTGPGTGAEALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERP
                     ::. :: .:: ::::::::. : .:: . :::.::::::   ::. 
XP_016              MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEK-
                            10        20        30        40       

               70        80        90       100       110       120
pF1KE3 GAGSVGAATRAPPFPLPCPQCREPARPSQLRPNRELAAVATLLRRFSLPAAAPGEHGSQA
       . :. :   :   ::  ::.::: .   .: ::: :. :: . ..       :: . .. 
XP_016 ARGKKGRRKRKGSFP--CPECREMSPQRNLLPNRLLTKVAEMAQQH------PGLQKQDL
         50        60          70        80        90              

              130       140       150       160       170       180
pF1KE3 AAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESR
                : .: ::.::.:: :   ::::: ..:::: : ::: .::::  :  ::  
XP_016 ---------CQEHHEPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEED
               100       110       120       130       140         

              190       200       210       220                    
pF1KE3 LRVLKKELEDCEVFRSTEKKESKELLVSQAPAGPPWDITEA                   
       .. :....     ... :..   :                                    
XP_016 MEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALET
     150       160       170       180       190       200         




221 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 08:49:18 2016 done: Sun Nov  6 08:49:19 2016
 Total Scan time:  6.750 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com