FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1343, 261 aa 1>>>pF1KE1343 261 - 261 aa - 261 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1082+/-0.000332; mu= 16.4982+/- 0.021 mean_var=77.5751+/-15.812, 0's: 0 Z-trim(115.3): 53 B-trim: 0 in 0/57 Lambda= 0.145617 statistics sampled from 25666 (25729) to 25666 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.302), width: 16 Scan time: 6.600 The best scores are: opt bits E(85289) NP_006111 (OMIM: 142855) HLA class II histocompati ( 261) 1844 396.6 2.4e-110 NP_064440 (OMIM: 613503) HLA class II histocompati ( 255) 371 87.1 3.4e-17 NP_002110 (OMIM: 142930) HLA class II histocompati ( 250) 363 85.4 1.1e-16 NP_002113 (OMIM: 146880,212750) HLA class II histo ( 255) 360 84.8 1.7e-16 NP_291032 (OMIM: 142880) HLA class II histocompati ( 260) 348 82.3 9.8e-16 NP_001229454 (OMIM: 142880) HLA class II histocomp ( 260) 348 82.3 9.8e-16 NP_001229453 (OMIM: 142880) HLA class II histocomp ( 260) 348 82.3 9.8e-16 NP_061984 (OMIM: 142860) HLA class II histocompati ( 254) 339 80.4 3.6e-15 XP_006715142 (OMIM: 146880,212750) PREDICTED: HLA ( 206) 270 65.8 7.1e-11 XP_011507765 (OMIM: 600764) PREDICTED: major histo ( 254) 174 45.7 9.7e-05 NP_620573 (OMIM: 104300,176100,176200,235200,61263 ( 256) 170 44.9 0.00018 NP_001522 (OMIM: 600764) major histocompatibility ( 341) 168 44.6 0.00029 XP_011546040 (OMIM: 126200,142857,180300,181000) P ( 266) 162 43.2 0.00058 NP_001185787 (OMIM: 615161) HLA class II histocomp ( 227) 157 42.1 0.0011 NP_001230891 (OMIM: 123400,126200,212750,604305) H ( 261) 157 42.2 0.0012 NP_004039 (OMIM: 105200,109700,241600) beta-2-micr ( 119) 151 40.6 0.0016 XP_005254606 (OMIM: 105200,109700,241600) PREDICTE ( 122) 151 40.6 0.0016 NP_072049 (OMIM: 612735) major histocompatibility ( 266) 153 41.3 0.0021 XP_011512862 (OMIM: 615161) PREDICTED: HLA class I ( 256) 150 40.7 0.0032 NP_001287719 (OMIM: 615161) HLA class II histocomp ( 264) 150 40.7 0.0033 NP_001230894 (OMIM: 126200,142857,180300,181000) m ( 266) 150 40.7 0.0033 XP_005249108 (OMIM: 615161) PREDICTED: HLA class I ( 275) 150 40.7 0.0034 NP_002112 (OMIM: 142858) HLA class II histocompati ( 258) 148 40.3 0.0043 NP_002111 (OMIM: 600629) HLA class II histocompati ( 273) 148 40.3 0.0045 NP_002115 (OMIM: 126200,142857,180300,181000) majo ( 266) 145 39.6 0.0069 NP_002114 (OMIM: 123400,126200,212750,604305) HLA ( 261) 144 39.4 0.0078 NP_001230890 (OMIM: 123400,126200,212750,604305) H ( 269) 144 39.4 0.008 >>NP_006111 (OMIM: 142855) HLA class II histocompatibili (261 aa) initn: 1844 init1: 1844 opt: 1844 Z-score: 2102.0 bits: 396.6 E(85289): 2.4e-110 Smith-Waterman score: 1844; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261) 10 20 30 40 50 60 pF1KE1 MGHEQNQGAALLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MGHEQNQGAALLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAILFDKEFCEWMIQQIGPKLDGKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EAYDEDQLFFFDFSQNTRVPRLPEFADWAQEQGDAPAILFDKEFCEWMIQQIGPKLDGKI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 PVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPVEGFGPTFVSAVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPVEGFGPTFVSAVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALPSDLLENVLCGVAFGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 GLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALPSDLLENVLCGVAFGLG 190 200 210 220 230 240 250 260 pF1KE1 VLGIIVGIVLIIYFRKPCSGD ::::::::::::::::::::: NP_006 VLGIIVGIVLIIYFRKPCSGD 250 260 >>NP_064440 (OMIM: 613503) HLA class II histocompatibili (255 aa) initn: 281 init1: 137 opt: 371 Z-score: 429.7 bits: 87.1 E(85289): 3.4e-17 Smith-Waterman score: 371; 30.7% identity (61.8% similar) in 241 aa overlap (20-252:7-240) 10 20 30 40 50 pF1KE1 MGHEQNQGAALLQMLPLLWLLPHSWAVPEAPTPMWPDDL-QNHTFLHTV-YCQDGSPSVG :: . :. . .: .:. .:. . : . :. .:: NP_064 MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQ 10 20 30 40 60 70 80 90 100 110 pF1KE1 LSEAYDEDQLFFFDFSQNTRVPRLPEFADWAQ--EQGDAPAILFDKEFCEWMIQQIGPKL .. .: :. :. :. . : .:: :. . . :. . :. :.:..: NP_064 YTHEFDGDEEFYVDLETKETVWQLPMFSKFISFDPQSALRNMAVGKHTLEFMMRQ----- 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 DGKIPVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNW--QHHSVPVEGFGPT ... .. : . ::. :. .:.::::.:.:.:.:::.....: . ::: .:: . : NP_064 SNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSV-TEGVSET 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 -FVSAVDGLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALP-SDLLENVL :.: : :: .:::.: : ..:..: : : . .: :. : :.: :... NP_064 SFLSKSDH-SFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLV 170 180 190 200 210 220 240 250 260 pF1KE1 CGVAFGLGVLGIIVGIVLIIYFRKPCSGD :......:..::.:: :.:: NP_064 CALGLSVGLMGIVVGTVFIIQGLRSVGASRHQGLL 230 240 250 >>NP_002110 (OMIM: 142930) HLA class II histocompatibili (250 aa) initn: 262 init1: 102 opt: 363 Z-score: 420.7 bits: 85.4 E(85289): 1.1e-16 Smith-Waterman score: 363; 32.2% identity (63.0% similar) in 211 aa overlap (49-252:38-240) 20 30 40 50 60 70 pF1KE1 WLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFFFDFSQNTR . :. . : ... .::.::: :.... NP_002 VLGFHTLMTLLSPQEAGATKADHMGSYGPAFYQSYGASGQFTHEFDEEQLFSVDLKKSEA 10 20 30 40 50 60 80 90 100 110 120 130 pF1KE1 VPRLPEFADWAQ--EQGDAPAILFDKEFCEWMIQQIGPKLDGKIPVSRGFPIAEVFTLKP : :::::.:.:. :: .: : . .... . . ..: : . :. . NP_002 VWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVERSNRSRAINVP-----PRVTVLPKSR 70 80 90 100 110 120 140 150 160 170 180 190 pF1KE1 LEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPV-EGFGPT-FVSAVDGLSFQAFSYLNFTP .:.:.:: :.:.:.:.:::.....: ... : :: . : : : : : :. : :: :.: NP_002 VELGQPNILICIVDNIFPPVINITWLRNGQTVTEGVAQTSFYSQPDHL-FRKFHYLPFVP 130 140 150 160 170 180 200 210 220 230 240 250 pF1KE1 EPSDIFSCIVTHEIDRYTAIAYW---VPRNALPSDLLENVLCGVAFGLGVLGIIVGIVLI :...: : : . .: :: : : .:...:......:..:..:: ::: NP_002 SAEDVYDCQVEHWGLDAPLLRHWELQVP--IPPPDAMETLVCALGLAIGLVGFLVGTVLI 190 200 210 220 230 260 pF1KE1 IYFRKPCSGD : NP_002 IMGTYVSSVPR 240 250 >>NP_002113 (OMIM: 146880,212750) HLA class II histocomp (255 aa) initn: 345 init1: 141 opt: 360 Z-score: 417.2 bits: 84.8 E(85289): 1.7e-16 Smith-Waterman score: 360; 32.0% identity (63.1% similar) in 203 aa overlap (55-252:44-240) 30 40 50 60 70 80 pF1KE1 WAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFFFDFSQNTRVPRLPE :: .. .: :. :. :. .. . : :: NP_002 LTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPE 20 30 40 50 60 70 90 100 110 120 130 140 pF1KE1 FADWA--QEQGDAPAILFDKEFCEWMIQQIGPKLDGKIPVSRGFPIAEVFTLKPLEFGKP :. .. . :: . :. . ::.. . . .. : . ::. .:. .:.: NP_002 FSKFGGFDPQGALRNMAVAKHNLNIMIKRYN-----STAATNEVPEVTVFSKSPVTLGQP 80 90 100 110 120 150 160 170 180 190 200 pF1KE1 NTLVCFVSNLFPPMLTVNWQHHSVPV-EGFGPT-FVSAVDGLSFQAFSYLNFTPEPSDIF :::.:.:.:.:::.....: .. : :: . : :.: : :: .:::.: : ..:. NP_002 NTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDH-SFFKISYLTFLPSADEIY 130 140 150 160 170 180 210 220 230 240 250 pF1KE1 SCIVTHEIDRYTAIAYWVPRNALP-SDLLENVLCGVAFGLGVLGIIVGIVLIIYFRKPCS .: : : . .: :. : :.: :.:.:......:..::.:: :.:: NP_002 DCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFIIQGLRSVG 190 200 210 220 230 240 260 pF1KE1 GD NP_002 ASRHQGPL 250 >>NP_291032 (OMIM: 142880) HLA class II histocompatibili (260 aa) initn: 347 init1: 140 opt: 348 Z-score: 403.5 bits: 82.3 E(85289): 9.8e-16 Smith-Waterman score: 348; 29.6% identity (61.1% similar) in 216 aa overlap (41-252:35-245) 20 30 40 50 60 70 pF1KE1 LLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFF .:. .... : :. . .:::..:. NP_291 DRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFY 10 20 30 40 50 60 80 90 100 110 120 pF1KE1 FDFSQNTRVPRLPEFADWA--QEQGDAPAILFDKEFCEWMIQQIGPKLDGKIPVSRGFPI :.... : .: ::.. . :: : . .. . .::. ... .. : NP_291 VDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQR-----SNHTQATNDPPE 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 AEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPV-EGFGPTFVSAVDGLSFQAF . :: .:.:.:.::::.: ....:::.:.:.: .. : :: . .. ::. : NP_291 VTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKF 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 SYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALP-SDLLENVLCGVAFGLGVLGIIV ::.:.: :...: : : . .: .. . . :.:::.... ::..:::: NP_291 HYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIV 180 190 200 210 220 230 250 260 pF1KE1 GIVLIIYFRKPCSGD : :::: NP_291 GTVLIIKSLRSGHDPRAQGTL 240 250 260 >>NP_001229454 (OMIM: 142880) HLA class II histocompatib (260 aa) initn: 347 init1: 140 opt: 348 Z-score: 403.5 bits: 82.3 E(85289): 9.8e-16 Smith-Waterman score: 348; 29.6% identity (61.1% similar) in 216 aa overlap (41-252:35-245) 20 30 40 50 60 70 pF1KE1 LLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFF .:. .... : :. . .:::..:. NP_001 DRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFY 10 20 30 40 50 60 80 90 100 110 120 pF1KE1 FDFSQNTRVPRLPEFADWA--QEQGDAPAILFDKEFCEWMIQQIGPKLDGKIPVSRGFPI :.... : .: ::.. . :: : . .. . .::. ... .. : NP_001 VDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQR-----SNHTQATNDPPE 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 AEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPV-EGFGPTFVSAVDGLSFQAF . :: .:.:.:.::::.: ....:::.:.:.: .. : :: . .. ::. : NP_001 VTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKF 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 SYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALP-SDLLENVLCGVAFGLGVLGIIV ::.:.: :...: : : . .: .. . . :.:::.... ::..:::: NP_001 HYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIV 180 190 200 210 220 230 250 260 pF1KE1 GIVLIIYFRKPCSGD : :::: NP_001 GTVLIIKSLRSGHDPRAQGTL 240 250 260 >>NP_001229453 (OMIM: 142880) HLA class II histocompatib (260 aa) initn: 347 init1: 140 opt: 348 Z-score: 403.5 bits: 82.3 E(85289): 9.8e-16 Smith-Waterman score: 348; 29.6% identity (61.1% similar) in 216 aa overlap (41-252:35-245) 20 30 40 50 60 70 pF1KE1 LLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFF .:. .... : :. . .:::..:. NP_001 DRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFY 10 20 30 40 50 60 80 90 100 110 120 pF1KE1 FDFSQNTRVPRLPEFADWA--QEQGDAPAILFDKEFCEWMIQQIGPKLDGKIPVSRGFPI :.... : .: ::.. . :: : . .. . .::. ... .. : NP_001 VDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQR-----SNHTQATNDPPE 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 AEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPV-EGFGPTFVSAVDGLSFQAF . :: .:.:.:.::::.: ....:::.:.:.: .. : :: . .. ::. : NP_001 VTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKF 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 SYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALP-SDLLENVLCGVAFGLGVLGIIV ::.:.: :...: : : . .: .. . . :.:::.... ::..:::: NP_001 HYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIV 180 190 200 210 220 230 250 260 pF1KE1 GIVLIIYFRKPCSGD : :::: NP_001 GTVLIIKSLRSGHDPRAQGTL 240 250 260 >>NP_061984 (OMIM: 142860) HLA class II histocompatibili (254 aa) initn: 199 init1: 126 opt: 339 Z-score: 393.4 bits: 80.4 E(85289): 3.6e-15 Smith-Waterman score: 341; 28.9% identity (58.1% similar) in 246 aa overlap (14-252:13-239) 10 20 30 40 50 60 pF1KE1 MGHEQNQGAALLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLS .. .: .:::. : .:..... . . . : . NP_061 MAISGVPVLGFFIIAVLMSAQESWAIKE-----------EHVIIQAEFYLNPDQSGEFM 10 20 30 40 70 80 90 100 110 pF1KE1 EAYDEDQLFFFDFSQNTRVPRLPEFADWA--QEQGDAPAILFDKEFCEWMIQQIGPKLDG .: :..: :.... : :: ::. .: . :: : :: : : .. .. NP_061 FDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKR-----SN 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 KIPVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPVE-GFGPT-FV :.. : . :.: .:.:. .::.:.::.... ::...:.: ... :: : . : :. NP_061 YTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 SAVDGLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYW---VPRNALPSDLLENVLC : : :. : :: : : :...: : : . .: .: . :: . :::.: NP_061 PREDHL-FRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAP-SPLP-ETTENVVC 170 180 190 200 210 220 240 250 260 pF1KE1 GVAFGLGVLGIIVGIVLIIYFRKPCSGD .... .:..:::.: ..:: NP_061 ALGLTVGLVGIIIGTIFIIKGLRKSNAAERRGPL 230 240 250 >>XP_006715142 (OMIM: 146880,212750) PREDICTED: HLA clas (206 aa) initn: 269 init1: 141 opt: 270 Z-score: 316.3 bits: 65.8 E(85289): 7.1e-11 Smith-Waterman score: 270; 30.4% identity (59.5% similar) in 168 aa overlap (55-218:44-205) 30 40 50 60 70 80 pF1KE1 WAVPEAPTPMWPDDLQNHTFLHTVYCQDGSPSVGLSEAYDEDQLFFFDFSQNTRVPRLPE :: .. .: :. :. :. .. . : :: XP_006 LTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPE 20 30 40 50 60 70 90 100 110 120 130 140 pF1KE1 FADWA--QEQGDAPAILFDKEFCEWMIQQIGPKLDGKIPVSRGFPIAEVFTLKPLEFGKP :. .. . :: . :. . ::.. . . .. : . ::. .:. .:.: XP_006 FSKFGGFDPQGALRNMAVAKHNLNIMIKRYN-----STAATNEVPEVTVFSKSPVTLGQP 80 90 100 110 120 150 160 170 180 190 200 pF1KE1 NTLVCFVSNLFPPMLTVNWQHHSVPV-EGFGPT-FVSAVDGLSFQAFSYLNFTPEPSDIF :::.:.:.:.:::.....: .. : :: . : :.: : :: .:::.: : ..:. XP_006 NTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDH-SFFKISYLTFLPSADEIY 130 140 150 160 170 180 210 220 230 240 250 260 pF1KE1 SCIVTHEIDRYTAIAYWVPRNALPSDLLENVLCGVAFGLGVLGIIVGIVLIIYFRKPCSG .: : : . .:: XP_006 DCKVEHWGLDQPLLKHWVE 190 200 >>XP_011507765 (OMIM: 600764) PREDICTED: major histocomp (254 aa) initn: 138 init1: 66 opt: 174 Z-score: 206.1 bits: 45.7 E(85289): 9.7e-05 Smith-Waterman score: 174; 22.6% identity (57.4% similar) in 230 aa overlap (38-257:21-240) 10 20 30 40 50 60 pF1KE1 GAALLQMLPLLWLLPHSWAVPEAPTPMWPDDLQNHTFLHTVYCQ---DGSPSVGLSEAYD : ..::. . . :. ::: . :. ::: XP_011 MGELMAFLLPLIIVLMVKHSDSRSHTYQRMIGCELLEDGSTTGFLQYAYD 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EDQLFFF--DFSQNTRVPRLPEFADWAQEQGDAPAILFDKEFCEWM-IQQIGPKLD-GKI .....: : . : . . : : .. .:..:.. : : . :. :: XP_011 GQDFLIFNKDTLSWLAVDNVAHTIKQAWE-ANQHELLYQKNWLEEECIAWLKRFLEYGKD 60 70 80 90 100 130 140 150 160 170 pF1KE1 PVSRGFPIAEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPVE---GFGPTFVS ..: : : . . : ..: : . ...:: . ..:.... . .: . : XP_011 TLQRTEP-PLVRVNRKETFPGVTALFCKAHGFYPPEIYMTWMKNGEEIVQEIDYGDILPS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 AVDGLSFQAFSYLNFTPEPSDIFSCIVTHEIDRYTAIAYWVPRNALPSDLLENVLCGVAF . :: ..::.. ... :. :...:: : : . .. ::.. :. . :. .:. XP_011 G-DG-TYQAWASIELDPQSSNLYSCHVEHC---GVHMVLQVPQE---SETIPLVMKAVSG 170 180 190 200 210 220 240 250 260 pF1KE1 GLGVLGIIVGIVLIIYFRKPCSGD .. .. ...:. .... :.: XP_011 SIVLVIVLAGVGVLVWRRRPREQNGAIYLPTPDR 230 240 250 261 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:50:43 2016 done: Mon Nov 7 01:50:44 2016 Total Scan time: 6.600 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]