FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3906, 459 aa 1>>>pF1KE3906 459 - 459 aa - 459 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1805+/-0.00118; mu= 8.4456+/- 0.070 mean_var=132.5705+/-29.957, 0's: 0 Z-trim(105.0): 216 B-trim: 0 in 0/48 Lambda= 0.111391 statistics sampled from 7922 (8172) to 7922 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.603), E-opt: 0.2 (0.251), width: 16 Scan time: 2.770 The best scores are: opt bits E(32554) CCDS46455.1 CHN1 gene_id:1123|Hs108|chr2 ( 459) 3090 508.7 5.2e-144 CCDS5420.1 CHN2 gene_id:1124|Hs108|chr7 ( 468) 2319 384.8 1e-106 CCDS56147.1 CHN1 gene_id:1123|Hs108|chr2 ( 334) 1861 311.1 1.1e-84 CCDS46454.1 CHN1 gene_id:1123|Hs108|chr2 ( 433) 1700 285.3 8.7e-77 CCDS47566.1 CHN2 gene_id:1124|Hs108|chr7 ( 332) 1499 252.9 3.7e-67 CCDS78219.1 CHN2 gene_id:1124|Hs108|chr7 ( 274) 847 148.0 1.1e-35 CCDS78217.1 CHN2 gene_id:1124|Hs108|chr7 ( 197) 820 143.6 1.7e-34 CCDS78218.1 CHN2 gene_id:1124|Hs108|chr7 ( 260) 677 120.7 1.8e-27 CCDS10239.1 MYO9A gene_id:4649|Hs108|chr15 (2548) 480 89.7 3.7e-17 CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17 ( 548) 465 86.9 5.8e-17 CCDS74082.1 ARHGAP27 gene_id:201176|Hs108|chr17 ( 889) 465 87.0 8.6e-17 CCDS7144.2 ARHGAP21 gene_id:57584|Hs108|chr10 (1958) 453 85.3 6.1e-16 CCDS2184.1 ARHGAP15 gene_id:55843|Hs108|chr2 ( 475) 442 83.1 6.7e-16 CCDS8795.1 RACGAP1 gene_id:29127|Hs108|chr12 ( 632) 444 83.5 6.8e-16 CCDS34075.1 ARHGAP10 gene_id:79658|Hs108|chr4 ( 786) 445 83.8 7.2e-16 CCDS54254.1 ARHGAP33 gene_id:115703|Hs108|chr19 (1123) 446 84.0 8.6e-16 CCDS12477.1 ARHGAP33 gene_id:115703|Hs108|chr19 (1126) 446 84.0 8.6e-16 CCDS32062.1 ARHGAP5 gene_id:394|Hs108|chr14 (1502) 444 83.8 1.4e-15 CCDS45095.1 ARHGAP5 gene_id:394|Hs108|chr14 (1501) 440 83.1 2.1e-15 CCDS56027.1 ARHGAP23 gene_id:57636|Hs108|chr17 (1491) 439 83.0 2.4e-15 CCDS46010.1 MYO9B gene_id:4650|Hs108|chr19 (2022) 441 83.4 2.4e-15 CCDS46127.1 ARHGAP35 gene_id:2909|Hs108|chr19 (1499) 438 82.8 2.6e-15 CCDS78220.1 CHN2 gene_id:1124|Hs108|chr7 ( 228) 422 79.7 3.5e-15 CCDS13807.1 BCR gene_id:613|Hs108|chr22 (1227) 432 81.8 4.4e-15 CCDS58497.1 ABR gene_id:29|Hs108|chr17 ( 310) 421 79.6 5e-15 CCDS13806.1 BCR gene_id:613|Hs108|chr22 (1271) 428 81.2 7e-15 CCDS73936.1 ABR gene_id:29|Hs108|chr17 ( 641) 421 79.8 8.9e-15 CCDS54060.1 ABR gene_id:29|Hs108|chr17 ( 813) 421 79.9 1.1e-14 CCDS11000.1 ABR gene_id:29|Hs108|chr17 ( 822) 421 79.9 1.1e-14 CCDS10999.1 ABR gene_id:29|Hs108|chr17 ( 859) 421 79.9 1.1e-14 CCDS59214.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 794) 420 79.7 1.2e-14 CCDS73082.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 799) 420 79.7 1.2e-14 CCDS59215.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 816) 420 79.7 1.2e-14 CCDS59216.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 841) 420 79.8 1.2e-14 CCDS7170.1 ARHGAP12 gene_id:94134|Hs108|chr10 ( 846) 420 79.8 1.2e-14 CCDS47297.1 ARHGAP26 gene_id:23092|Hs108|chr5 ( 759) 412 78.4 2.8e-14 CCDS4277.1 ARHGAP26 gene_id:23092|Hs108|chr5 ( 814) 412 78.5 2.9e-14 CCDS43135.1 ARHGAP31 gene_id:57514|Hs108|chr3 (1444) 415 79.1 3.3e-14 CCDS31718.1 ARHGAP32 gene_id:9743|Hs108|chr11 (1738) 404 77.4 1.3e-13 CCDS44769.1 ARHGAP32 gene_id:9743|Hs108|chr11 (2087) 404 77.4 1.5e-13 CCDS1215.1 ARHGAP30 gene_id:257106|Hs108|chr1 ( 890) 394 75.6 2.3e-13 CCDS30918.1 ARHGAP30 gene_id:257106|Hs108|chr1 (1101) 394 75.7 2.8e-13 CCDS2572.1 SRGAP3 gene_id:9901|Hs108|chr3 (1099) 390 75.0 4.3e-13 CCDS14388.1 OPHN1 gene_id:4983|Hs108|chrX ( 802) 386 74.3 5.2e-13 CCDS8967.1 SRGAP1 gene_id:57522|Hs108|chr12 (1085) 368 71.5 5e-12 CCDS14736.1 ARHGAP4 gene_id:393|Hs108|chrX ( 946) 363 70.6 7.8e-12 CCDS55540.1 ARHGAP4 gene_id:393|Hs108|chrX ( 986) 363 70.6 8e-12 CCDS13952.2 SH3BP1 gene_id:23616|Hs108|chr22 ( 701) 360 70.1 8.5e-12 CCDS33689.1 SRGAP3 gene_id:9901|Hs108|chr3 (1075) 359 70.0 1.3e-11 CCDS43246.1 ARHGAP24 gene_id:83478|Hs108|chr4 ( 653) 349 68.3 2.7e-11 >>CCDS46455.1 CHN1 gene_id:1123|Hs108|chr2 (459 aa) initn: 3090 init1: 3090 opt: 3090 Z-score: 2698.9 bits: 508.7 E(32554): 5.2e-144 Smith-Waterman score: 3090; 100.0% identity (100.0% similar) in 459 aa overlap (1-459:1-459) 10 20 30 40 50 60 pF1KE3 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 GLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAY 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 PKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI 370 380 390 400 410 420 430 440 450 pF1KE3 VFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF ::::::::::::::::::::::::::::::::::::::: CCDS46 VFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF 430 440 450 >>CCDS5420.1 CHN2 gene_id:1124|Hs108|chr7 (468 aa) initn: 2320 init1: 1505 opt: 2319 Z-score: 2029.2 bits: 384.8 E(32554): 1e-106 Smith-Waterman score: 2319; 73.5% identity (91.2% similar) in 453 aa overlap (7-459:17-468) 10 20 30 40 50 pF1KE3 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREF :..::.::.:::::::::::::.:.:: : ::::::::::::: CCDS54 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 HGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRF ::.:::: ::.:: .::.:..:::::::: ::::::::.:: :.::..::::::::::: CCDS54 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 ESIHDLVTDGLITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDE ::::::::::::::::::::::::.::: ::::::.::.:: :: . .. . :. . CCDS54 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRR-LSRSKNEPRK 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 RDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMWGLI . : .. .. ....::::::.: .:.. .::: ::::::::::::::::::::::::: CCDS54 TNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLI 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 AQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIR ::::.:.:::::::::::: :::::.::::..:::: ::::::::::.:.::::::.::: CCDS54 AQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIR 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 EIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDL :::.:::.::::::::::.. ::::::::::::::::::.:.: :::::::::::::::: CCDS54 EIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDL 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE3 PIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKE :::.::::.: :::..::: . ::.::..::.: :::::: ::::::: :::.::..::. CCDS54 PIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKD 360 370 380 390 400 410 420 430 440 450 pF1KE3 NLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF :.:::::::::::::::: :: .....:.:.:::.:.:..::.:::.:: CCDS54 NFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 420 430 440 450 460 >>CCDS56147.1 CHN1 gene_id:1123|Hs108|chr2 (334 aa) initn: 1861 init1: 1861 opt: 1861 Z-score: 1633.5 bits: 311.1 E(32554): 1.1e-84 Smith-Waterman score: 1861; 99.6% identity (100.0% similar) in 277 aa overlap (183-459:58-334) 160 170 180 190 200 210 pF1KE3 REPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT .::::::::::::::::::::::::::::: CCDS56 DLLIAALGMKLGSPKSSVTIWQPLKLFAYSQLTSLVRRATLKENEQIPKYEKIHNFKVHT 30 40 50 60 70 80 220 230 240 250 260 270 pF1KE3 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTT 90 100 110 120 130 140 280 290 300 310 320 330 pF1KE3 LVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNM 150 160 170 180 190 200 340 350 360 370 380 390 pF1KE3 YEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 YEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCE 210 220 230 240 250 260 400 410 420 430 440 450 pF1KE3 TLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 TLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLI 270 280 290 300 310 320 pF1KE3 KNEDILF ::::::: CCDS56 KNEDILF 330 >>CCDS46454.1 CHN1 gene_id:1123|Hs108|chr2 (433 aa) initn: 1700 init1: 1700 opt: 1700 Z-score: 1492.1 bits: 285.3 E(32554): 8.7e-77 Smith-Waterman score: 2865; 94.3% identity (94.3% similar) in 459 aa overlap (1-459:1-433) 10 20 30 40 50 60 pF1KE3 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MALTLFDTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LITLYIETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCG ::: ::::::::::::::::::::::::::::::: CCDS46 EKR--------------------------VHTFRGPHWCEYCANFMWGLIAQGVKCADCG 190 200 210 250 260 270 280 290 300 pF1KE3 LNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSE 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE3 GLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAY 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE3 PKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGI 340 350 360 370 380 390 430 440 450 pF1KE3 VFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF ::::::::::::::::::::::::::::::::::::::: CCDS46 VFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF 400 410 420 430 >>CCDS47566.1 CHN2 gene_id:1124|Hs108|chr7 (332 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1319.1 bits: 252.9 E(32554): 3.7e-67 Smith-Waterman score: 1499; 76.5% identity (94.2% similar) in 277 aa overlap (183-459:56-332) 160 170 180 190 200 210 pF1KE3 REPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT ...::::::.: .:.. .::: ::::::: CCDS47 RQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFKVHT 30 40 50 60 70 80 220 230 240 250 260 270 pF1KE3 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTT ::::::::::::::::::::::.:.:::::::::::: :::::.::::..:::: ::::: CCDS47 FRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTT 90 100 110 120 130 140 280 290 300 310 320 330 pF1KE3 LVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNM :::::.:.::::::.::::::.:::.::::::::::.. ::::::::::::::::::.:. CCDS47 LVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANV 150 160 170 180 190 200 340 350 360 370 380 390 pF1KE3 YEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCE : :::::::::::::::::::.::::.: :::..::: . ::.::..::.: :::::: : CCDS47 YPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYE 210 220 230 240 250 260 400 410 420 430 440 450 pF1KE3 TLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLI :::::: :::.::..::.:.:::::::::::::::: :: .....:.:.:::.:.:..:: CCDS47 TLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILI 270 280 290 300 310 320 pF1KE3 KNEDILF .:::.:: CCDS47 ENEDVLF 330 >>CCDS78219.1 CHN2 gene_id:1124|Hs108|chr7 (274 aa) initn: 825 init1: 825 opt: 847 Z-score: 754.1 bits: 148.0 E(32554): 1.1e-35 Smith-Waterman score: 1011; 58.8% identity (74.0% similar) in 277 aa overlap (183-459:56-274) 160 170 180 190 200 210 pF1KE3 REPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT ...::::::.: .:.. .::: ::::::: CCDS78 RQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFKVHT 30 40 50 60 70 80 220 230 240 250 260 270 pF1KE3 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTT ::::::::::::::::::::::.:. CCDS78 FRGPHWCEYCANFMWGLIAQGVRCS----------------------------------- 90 100 110 280 290 300 310 320 330 pF1KE3 LVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNM ::.::::::::::.. ::::::::::::::::::.:. CCDS78 -----------------------GLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANV 120 130 140 340 350 360 370 380 390 pF1KE3 YEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCE : :::::::::::::::::::.::::.: :::..::: . ::.::..::.: :::::: : CCDS78 YPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYE 150 160 170 180 190 200 400 410 420 430 440 450 pF1KE3 TLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLI :::::: :::.::..::.:.:::::::::::::::: :: .....:.:.:::.:.:..:: CCDS78 TLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILI 210 220 230 240 250 260 pF1KE3 KNEDILF .:::.:: CCDS78 ENEDVLF 270 >>CCDS78217.1 CHN2 gene_id:1124|Hs108|chr7 (197 aa) initn: 820 init1: 820 opt: 820 Z-score: 732.7 bits: 143.6 E(32554): 1.7e-34 Smith-Waterman score: 820; 80.6% identity (95.0% similar) in 139 aa overlap (183-321:56-194) 160 170 180 190 200 210 pF1KE3 REPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT ...::::::.: .:.. .::: ::::::: CCDS78 RQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFKVHT 30 40 50 60 70 80 220 230 240 250 260 270 pF1KE3 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTT ::::::::::::::::::::::.:.:::::::::::: :::::.::::..:::: ::::: CCDS78 FRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTT 90 100 110 120 130 140 280 290 300 310 320 330 pF1KE3 LVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNM :::::.:.::::::.::::::.:::.::::::::::.. :::::::::: CCDS78 LVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRGLL 150 160 170 180 190 340 350 360 370 380 390 pF1KE3 YEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCE >>CCDS78218.1 CHN2 gene_id:1124|Hs108|chr7 (260 aa) initn: 672 init1: 672 opt: 677 Z-score: 606.7 bits: 120.7 E(32554): 1.8e-27 Smith-Waterman score: 944; 54.5% identity (69.3% similar) in 277 aa overlap (183-459:56-260) 160 170 180 190 200 210 pF1KE3 REPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT ...::::::.: .:.. .::: ::::::: CCDS78 RQELLAVAFGVKVGVKGGFLWPPLKLFACSQISSLVRRAALTHNDNHFNYEKTHNFKVHT 30 40 50 60 70 80 220 230 240 250 260 270 pF1KE3 FRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTT ::::::::::::::::::::::.:.:::::::::::: :::::.::::..:::: ::::: CCDS78 FRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTT 90 100 110 120 130 140 280 290 300 310 320 330 pF1KE3 LVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNM :::::.:.::::::.::::::.: CCDS78 LVKAHNTQRPMVVDICIREIEAR------------------------------------- 150 160 340 350 360 370 380 390 pF1KE3 YEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCE .: . ::.::..::.: :::::: : CCDS78 -----------------------------------EISNADERLEAVHEVLMLLPPAHYE 170 180 190 400 410 420 430 440 450 pF1KE3 TLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLI :::::: :::.::..::.:.:::::::::::::::: :: .....:.:.:::.:.:..:: CCDS78 TLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILI 200 210 220 230 240 250 pF1KE3 KNEDILF .:::.:: CCDS78 ENEDVLF 260 >>CCDS10239.1 MYO9A gene_id:4649|Hs108|chr15 (2548 aa) initn: 371 init1: 226 opt: 480 Z-score: 421.4 bits: 89.7 E(32554): 3.7e-17 Smith-Waterman score: 480; 30.6% identity (64.9% similar) in 268 aa overlap (189-452:1983-2244) 160 170 180 190 200 210 pF1KE3 KHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFRGPHW :. :.. .. . .. : ::. . : . CCDS10 WVNTFKVFLDEYMNEFKTSDCTATKVPKTERKKRRKKETDLVEEHNGHIFKATQYSIPTY 1960 1970 1980 1990 2000 2010 220 230 240 250 260 270 pF1KE3 CEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDC--KPDLKHVKKVYSCDLTTLVKA ::::....: .. .. : : ::.: . : : : . .. .. .:. :.. CCDS10 CEYCSSLIW-IMDRASVCKLCKYACHKKCCLKTTAKCSKKYDPELSSRQFGVELSRLTSE 2020 2030 2040 2050 2060 2070 280 290 300 310 320 330 pF1KE3 HTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYE-D : :.::. : :: .:: .::.:: :: .. :.......: :.: :::. . . CCDS10 DRTV-PLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAE----SVNLDDYN 2080 2090 2100 2110 2120 340 350 360 370 380 390 pF1KE3 INIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLR :..:....: ..:::: ::.:.. : .:... ... : .. .. .. : .: .::. CCDS10 IHVIASVFKQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSRTHLNTLE 2130 2140 2150 2160 2170 2180 400 410 420 430 440 450 pF1KE3 YLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPEL-DAMAALNDIRYQRLVVELLIKN :. :: :..:.: : :.:. :.:::.: ..: :. : . ...:: :::.. CCDS10 RLIFHLVRIALQEDTNRMSANALAIVFAPCILRCPDTTDPLQSVQDISKTTTCVELIVVE 2190 2200 2210 2220 2230 2240 pF1KE3 EDILF CCDS10 QMNKYKARLKDISSLEFAENKAKTRLSLIRRSMGKGRIRRGNYPGPSSPVVVRLPSVSDV 2250 2260 2270 2280 2290 2300 >>CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17 (548 aa) initn: 440 init1: 280 opt: 465 Z-score: 418.0 bits: 86.9 E(32554): 5.8e-17 Smith-Waterman score: 465; 37.2% identity (73.0% similar) in 196 aa overlap (264-458:352-545) 240 250 260 270 280 290 pF1KE3 VKCADCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIE .:..: :..: . . .. : :..::: .: CCDS11 DLSKVRHKLRKFLQRRPTLQSLREKGYIKDQVFGCALAALCERERSRVPRFVQQCIRAVE 330 340 350 360 370 380 300 310 320 330 340 350 pF1KE3 SRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIP .:::. .::::.:: :. ... :.: :. :.. . .::...:::::::.::.:: : CCDS11 ARGLDIDGLYRISGNLATIQKLRYKVDHD-ERLDLDDGRWEDVHVITGALKLFFRELPEP 390 400 410 420 430 440 360 370 380 390 400 410 pF1KE3 LITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLM :. .. . .:: . :..: .. . ... .. :: . .:::.:. :: :: : ..: : CCDS11 LFPFSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRM 450 460 470 480 490 500 420 430 440 450 pF1KE3 NAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKN-EDILF ......:::::::.: ::.. . . .: ::::.... ::. CCDS11 SVQSVAIVFGPTLLR-PEVEETSMPMTMVFQNQVVELILQQCADIFPPH 510 520 530 540 459 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:04:51 2016 done: Sun Nov 6 09:04:51 2016 Total Scan time: 2.770 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]