FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6105, 82 aa 1>>>pF1KE6105 82 - 82 aa - 82 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4171+/-0.000294; mu= 11.8480+/- 0.018 mean_var=42.8559+/- 8.658, 0's: 0 Z-trim(115.8): 7 B-trim: 256 in 1/53 Lambda= 0.195916 statistics sampled from 26529 (26534) to 26529 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.311), width: 16 Scan time: 3.490 The best scores are: opt bits E(85289) NP_057181 (OMIM: 609382,614231) immediate early re ( 82) 519 153.1 4.8e-38 >>NP_057181 (OMIM: 609382,614231) immediate early respon (82 aa) initn: 519 init1: 519 opt: 519 Z-score: 804.1 bits: 153.1 E(85289): 4.8e-38 Smith-Waterman score: 519; 100.0% identity (100.0% similar) in 82 aa overlap (1-82:1-82) 10 20 30 40 50 60 pF1KE6 MAFTLYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MAFTLYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVR 10 20 30 40 50 60 70 80 pF1KE6 TVMRVPLIIVNSIAIVLLLLFG :::::::::::::::::::::: NP_057 TVMRVPLIIVNSIAIVLLLLFG 70 80 82 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:29:54 2016 done: Tue Nov 8 09:29:54 2016 Total Scan time: 3.490 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]