FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6343, 311 aa 1>>>pF1KE6343 311 - 311 aa - 311 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4380+/-0.00085; mu= 20.2271+/- 0.051 mean_var=62.0435+/-13.153, 0's: 0 Z-trim(106.5): 16 B-trim: 44 in 1/49 Lambda= 0.162827 statistics sampled from 8999 (9002) to 8999 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.277), width: 16 Scan time: 1.760 The best scores are: opt bits E(32554) CCDS10227.1 CLN6 gene_id:54982|Hs108|chr15 ( 311) 2123 507.2 6.4e-144 >>CCDS10227.1 CLN6 gene_id:54982|Hs108|chr15 (311 aa) initn: 2123 init1: 2123 opt: 2123 Z-score: 2697.3 bits: 507.2 E(32554): 6.4e-144 Smith-Waterman score: 2123; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 pF1KE6 MEATRRRQHLGATGGPGAQLGASFLQARHGSVSADEAARTAPFHLDLWFYFTLQNWVLDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MEATRRRQHLGATGGPGAQLGASFLQARHGSVSADEAARTAPFHLDLWFYFTLQNWVLDF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GRPIAMLVFPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIERSPRTLPRSITYVSIIIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GRPIAMLVFPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIERSPRTLPRSITYVSIIIF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 IMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPETLIDSFELLYYYDEYLGHCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 IMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPETLIDSFELLYYYDEYLGHCM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 WYIPFFLILFMYFSGCFTASKAESLIPGPALLLVAPSGLYYWYLVTEGQIFILFIFTFFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 WYIPFFLILFMYFSGCFTASKAESLIPGPALLLVAPSGLYYWYLVTEGQIFILFIFTFFA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 MLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALWVAWLWNDPVLRKKYPGVIYVPEPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALWVAWLWNDPVLRKKYPGVIYVPEPW 250 260 270 280 290 300 310 pF1KE6 AFYTLHVSSRH ::::::::::: CCDS10 AFYTLHVSSRH 310 311 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:17:48 2016 done: Tue Nov 8 12:17:48 2016 Total Scan time: 1.760 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]