FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6334, 316 aa 1>>>pF1KE6334 316 - 316 aa - 316 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8155+/-0.000351; mu= 18.7209+/- 0.022 mean_var=66.8067+/-13.445, 0's: 0 Z-trim(113.8): 31 B-trim: 0 in 0/55 Lambda= 0.156915 statistics sampled from 23279 (23308) to 23279 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.273), width: 16 Scan time: 7.170 The best scores are: opt bits E(85289) NP_009014 (OMIM: 606261) nucleoside diphosphate-li ( 316) 2164 498.7 6.5e-141 NP_932158 (OMIM: 606261) nucleoside diphosphate-li ( 147) 1000 234.9 7.6e-62 NP_694853 (OMIM: 300527) diphosphoinositol polypho ( 164) 162 45.2 0.00011 NP_001291892 (OMIM: 300527) diphosphoinositol poly ( 164) 162 45.2 0.00011 NP_950241 (OMIM: 609229) diphosphoinositol polypho ( 181) 161 45.1 0.00013 NP_061967 (OMIM: 609229) diphosphoinositol polypho ( 180) 152 43.0 0.00055 NP_060629 (OMIM: 300528) diphosphoinositol polypho ( 164) 151 42.8 0.0006 NP_006694 (OMIM: 609228) diphosphoinositol polypho ( 172) 143 41.0 0.0022 >>NP_009014 (OMIM: 606261) nucleoside diphosphate-linked (316 aa) initn: 2164 init1: 2164 opt: 2164 Z-score: 2650.9 bits: 498.7 E(85289): 6.5e-141 Smith-Waterman score: 2164; 100.0% identity (100.0% similar) in 316 aa overlap (1-316:1-316) 10 20 30 40 50 60 pF1KE6 MRQPLSWGRWRAMLARTYGPGPSAGYRWASGAQGYVRNPPVGACDLQGELDRFGGISVRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 MRQPLSWGRWRAMLARTYGPGPSAGYRWASGAQGYVRNPPVGACDLQGELDRFGGISVRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 ARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 DSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 EEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 EEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 EECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 EECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKL 250 260 270 280 290 300 310 pF1KE6 YHKELPENYKTMKGID :::::::::::::::: NP_009 YHKELPENYKTMKGID 310 >>NP_932158 (OMIM: 606261) nucleoside diphosphate-linked (147 aa) initn: 1000 init1: 1000 opt: 1000 Z-score: 1231.3 bits: 234.9 E(85289): 7.6e-62 Smith-Waterman score: 1000; 100.0% identity (100.0% similar) in 147 aa overlap (170-316:1-147) 140 150 160 170 180 190 pF1KE6 ASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIK :::::::::::::::::::::::::::::: NP_932 MWKFPGGLSEPEEDIGDTAVREVFEETGIK 10 20 30 200 210 220 230 240 250 pF1KE6 SEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 SEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTEN 40 50 60 70 80 90 260 270 280 290 300 310 pF1KE6 TTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKLYHKELPENYKTMKGID ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 TTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKLYHKELPENYKTMKGID 100 110 120 130 140 >>NP_694853 (OMIM: 300527) diphosphoinositol polyphospha (164 aa) initn: 142 init1: 142 opt: 162 Z-score: 205.4 bits: 45.2 E(85289): 0.00011 Smith-Waterman score: 162; 26.2% identity (61.9% similar) in 126 aa overlap (153-274:28-146) 130 140 150 160 170 180 pF1KE6 STLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEE : ..:.:.. .. . : ::: :::: NP_694 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSS-SRYPDRWIVPGGGMEPEE 10 20 30 40 50 190 200 210 220 230 pF1KE6 DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICR---LKPYSFTINFC . : .:::::.::.:.:... .:.. .:. .: .. .:.. :. . .... NP_694 EPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDPK--HRTYVYVLTVTELLEDWEDSVSIG 60 70 80 90 100 110 240 250 260 270 280 290 pF1KE6 QEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFY ... ::. ..: :. . :. .. . : : NP_694 RKR----EWFKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 300 310 pF1KE6 KLYHKELPENYKTMKGID >>NP_001291892 (OMIM: 300527) diphosphoinositol polyphos (164 aa) initn: 142 init1: 142 opt: 162 Z-score: 205.4 bits: 45.2 E(85289): 0.00011 Smith-Waterman score: 162; 26.2% identity (61.9% similar) in 126 aa overlap (153-274:28-146) 130 140 150 160 170 180 pF1KE6 STLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEE : ..:.:.. .. . : ::: :::: NP_001 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSS-SRYPDRWIVPGGGMEPEE 10 20 30 40 50 190 200 210 220 230 pF1KE6 DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICR---LKPYSFTINFC . : .:::::.::.:.:... .:.. .:. .: .. .:.. :. . .... NP_001 EPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDPK--HRTYVYVLTVTELLEDWEDSVSIG 60 70 80 90 100 110 240 250 260 270 280 290 pF1KE6 QEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFY ... ::. ..: :. . :. .. . : : NP_001 RKR----EWFKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 300 310 pF1KE6 KLYHKELPENYKTMKGID >>NP_950241 (OMIM: 609229) diphosphoinositol polyphospha (181 aa) initn: 133 init1: 133 opt: 161 Z-score: 203.6 bits: 45.1 E(85289): 0.00013 Smith-Waterman score: 161; 27.8% identity (61.9% similar) in 126 aa overlap (153-274:29-147) 130 140 150 160 170 180 pF1KE6 STLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEE :. ..:.:.. .. ..: ::: :::: NP_950 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSS-SRYPDQWIVPGGGMEPEE 10 20 30 40 50 190 200 210 220 230 pF1KE6 DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICR---LKPYSFTINFC . : .:::::.::.:.:... .:.: .: : .. .:.. :. . ..:. NP_950 EPGGAAVREVYEEAGVKGKLGRLLGIFEQ--NQDRKHRTYVYVLTVTEILEDWEDSVNIG 60 70 80 90 100 110 240 250 260 270 280 290 pF1KE6 QEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFY ... ::. ..: :. . :. .. . : : NP_950 RKR----EWFKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAA 120 130 140 150 160 170 300 310 pF1KE6 KLYHKELPENYKTMKGID NP_950 QTSGLPSSVR 180 >>NP_061967 (OMIM: 609229) diphosphoinositol polyphospha (180 aa) initn: 125 init1: 125 opt: 152 Z-score: 192.6 bits: 43.0 E(85289): 0.00055 Smith-Waterman score: 152; 27.0% identity (61.1% similar) in 126 aa overlap (153-274:29-146) 130 140 150 160 170 180 pF1KE6 STLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEE :. ..:.:.. .. ..: ::: :::: NP_061 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSS-SRYPDQWIVPGGGMEPEE 10 20 30 40 50 190 200 210 220 230 pF1KE6 DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICR---LKPYSFTINFC . : .:::::.::.:.:... .:.: . : .. .:.. :. . ..:. NP_061 EPGGAAVREVYEEAGVKGKLGRLLGIFE---NQDRKHRTYVYVLTVTEILEDWEDSVNIG 60 70 80 90 100 110 240 250 260 270 280 290 pF1KE6 QEECLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFY ... ::. ..: :. . :. .. . : : NP_061 RKR----EWFKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAA 120 130 140 150 160 170 300 310 pF1KE6 KLYHKELPENYKTMKGID NP_061 QTSGLPSSVR 180 >>NP_060629 (OMIM: 300528) diphosphoinositol polyphospha (164 aa) initn: 132 init1: 132 opt: 151 Z-score: 191.9 bits: 42.8 E(85289): 0.0006 Smith-Waterman score: 151; 37.1% identity (72.6% similar) in 62 aa overlap (153-214:28-88) 130 140 150 160 170 180 pF1KE6 STLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEE : ..:.:.. .. . : ::: :::: NP_060 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSS-SRYPDRWIVPGGGMEPEE 10 20 30 40 50 190 200 210 220 230 240 pF1KE6 DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEE . : .:::::.::.:.:... .:.. .:. . NP_060 EPGGAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRK 60 70 80 90 100 110 250 260 270 280 290 300 pF1KE6 CLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKLYH NP_060 REWFKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 >>NP_006694 (OMIM: 609228) diphosphoinositol polyphospha (172 aa) initn: 157 init1: 102 opt: 143 Z-score: 181.8 bits: 41.0 E(85289): 0.0022 Smith-Waterman score: 143; 25.8% identity (58.1% similar) in 124 aa overlap (153-275:29-147) 130 140 150 160 170 180 pF1KE6 STLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEE :: ...:.:.. .. . : ::: :::: NP_006 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSS-SRHPDRWIVPGGGMEPEE 10 20 30 40 50 190 200 210 220 230 240 pF1KE6 DIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEE . . .::::: ::.:.:. . ...: ... . . :. . ..:. ... NP_006 EPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKR 60 70 80 90 100 110 250 260 270 280 290 300 pF1KE6 CLRCEWMDLNDLAKT-ENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVYTGLFYKLY ::. ..: :. . :. . . : :: NP_006 ----EWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 120 130 140 150 160 170 310 pF1KE6 HKELPENYKTMKGID 316 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:12:36 2016 done: Tue Nov 8 12:12:37 2016 Total Scan time: 7.170 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]