FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6990, 252 aa 1>>>pF1KB6990 252 - 252 aa - 252 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9417+/-0.000736; mu= 7.4059+/- 0.045 mean_var=108.6237+/-21.149, 0's: 0 Z-trim(112.4): 33 B-trim: 0 in 0/51 Lambda= 0.123059 statistics sampled from 13163 (13194) to 13163 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.405), width: 16 Scan time: 2.530 The best scores are: opt bits E(32554) CCDS3565.1 AREG gene_id:374|Hs108|chr4 ( 252) 1667 305.9 1.7e-83 >>CCDS3565.1 AREG gene_id:374|Hs108|chr4 (252 aa) initn: 1667 init1: 1667 opt: 1667 Z-score: 1612.6 bits: 305.9 E(32554): 1.7e-83 Smith-Waterman score: 1667; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252) 10 20 30 40 50 60 pF1KB6 MRAPLLPPAPVVLSLLILGSGHYAAGLDLNDTYSGKREPFSGDHSADGFEVTSRSEMSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MRAPLLPPAPVVLSLLILGSGHYAAGLDLNDTYSGKREPFSGDHSADGFEVTSRSEMSSG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 SEISPVSEMPSSSEPSSGADYDYSEEYDNEPQIPGYIVDDSVRVEQVVKPPQNKTESENT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 SEISPVSEMPSSSEPSSGADYDYSEEYDNEPQIPGYIVDDSVRVEQVVKPPQNKTESENT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SDKPKRKKKGGKNGKNRRNRKKKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 SDKPKRKKKGGKNGKNRRNRKKKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 CGEKSMKTHSMIDSSLSKIALAAIAAFMSAVILTAVAVITVQLRRQYVRKYEGEAEERKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 CGEKSMKTHSMIDSSLSKIALAAIAAFMSAVILTAVAVITVQLRRQYVRKYEGEAEERKK 190 200 210 220 230 240 250 pF1KB6 LRQENGNVHAIA :::::::::::: CCDS35 LRQENGNVHAIA 250 252 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:01:32 2016 done: Mon Nov 7 02:01:32 2016 Total Scan time: 2.530 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]