FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2306, 297 aa 1>>>pF1KE2306 297 - 297 aa - 297 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3223+/-0.000322; mu= 6.8495+/- 0.020 mean_var=130.7856+/-26.828, 0's: 0 Z-trim(119.6): 27 B-trim: 251 in 1/55 Lambda= 0.112149 statistics sampled from 33784 (33811) to 33784 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.396), width: 16 Scan time: 8.180 The best scores are: opt bits E(85289) XP_016881950 (OMIM: 126380,610758) PREDICTED: DNA ( 297) 1987 332.2 7.3e-91 NP_001974 (OMIM: 126380,610758) DNA excision repai ( 297) 1987 332.2 7.3e-91 XP_016881953 (OMIM: 126380,610758) PREDICTED: DNA ( 297) 1987 332.2 7.3e-91 XP_016881952 (OMIM: 126380,610758) PREDICTED: DNA ( 297) 1987 332.2 7.3e-91 XP_016881951 (OMIM: 126380,610758) PREDICTED: DNA ( 297) 1987 332.2 7.3e-91 XP_016881949 (OMIM: 126380,610758) PREDICTED: DNA ( 297) 1987 332.2 7.3e-91 XP_016881948 (OMIM: 126380,610758) PREDICTED: DNA ( 323) 1887 316.1 5.8e-86 XP_011524912 (OMIM: 126380,610758) PREDICTED: DNA ( 323) 1887 316.1 5.8e-86 XP_005258691 (OMIM: 126380,610758) PREDICTED: DNA ( 323) 1887 316.1 5.8e-86 NP_973730 (OMIM: 126380,610758) DNA excision repai ( 323) 1887 316.1 5.8e-86 XP_005258693 (OMIM: 126380,610758) PREDICTED: DNA ( 323) 1887 316.1 5.8e-86 XP_005258692 (OMIM: 126380,610758) PREDICTED: DNA ( 323) 1887 316.1 5.8e-86 XP_016881954 (OMIM: 126380,610758) PREDICTED: DNA ( 273) 1587 267.5 2.1e-71 XP_016881955 (OMIM: 126380,610758) PREDICTED: DNA ( 273) 1587 267.5 2.1e-71 NP_001159521 (OMIM: 126380,610758) DNA excision re ( 273) 1587 267.5 2.1e-71 XP_005258694 (OMIM: 126380,610758) PREDICTED: DNA ( 299) 1587 267.5 2.2e-71 >>XP_016881950 (OMIM: 126380,610758) PREDICTED: DNA exci (297 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1752.2 bits: 332.2 E(85289): 7.3e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP 250 260 270 280 290 >>NP_001974 (OMIM: 126380,610758) DNA excision repair pr (297 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1752.2 bits: 332.2 E(85289): 7.3e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP 250 260 270 280 290 >>XP_016881953 (OMIM: 126380,610758) PREDICTED: DNA exci (297 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1752.2 bits: 332.2 E(85289): 7.3e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP 250 260 270 280 290 >>XP_016881952 (OMIM: 126380,610758) PREDICTED: DNA exci (297 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1752.2 bits: 332.2 E(85289): 7.3e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP 250 260 270 280 290 >>XP_016881951 (OMIM: 126380,610758) PREDICTED: DNA exci (297 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1752.2 bits: 332.2 E(85289): 7.3e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP 250 260 270 280 290 >>XP_016881949 (OMIM: 126380,610758) PREDICTED: DNA exci (297 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1752.2 bits: 332.2 E(85289): 7.3e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 297 aa overlap (1-297:1-297) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP 250 260 270 280 290 >>XP_016881948 (OMIM: 126380,610758) PREDICTED: DNA exci (323 aa) initn: 1912 init1: 1887 opt: 1887 Z-score: 1664.3 bits: 316.1 E(85289): 5.8e-86 Smith-Waterman score: 1887; 99.3% identity (99.6% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP :::::::::::::::::::::::::::::::::::::::::.: : XP_016 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKVRALGKNPRSWGKERAPNK 250 260 270 280 290 300 XP_016 HNLRPQSFKVKKEPKTRHSGFRL 310 320 >>XP_011524912 (OMIM: 126380,610758) PREDICTED: DNA exci (323 aa) initn: 1912 init1: 1887 opt: 1887 Z-score: 1664.3 bits: 316.1 E(85289): 5.8e-86 Smith-Waterman score: 1887; 99.3% identity (99.6% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP :::::::::::::::::::::::::::::::::::::::::.: : XP_011 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKVRALGKNPRSWGKERAPNK 250 260 270 280 290 300 XP_011 HNLRPQSFKVKKEPKTRHSGFRL 310 320 >>XP_005258691 (OMIM: 126380,610758) PREDICTED: DNA exci (323 aa) initn: 1912 init1: 1887 opt: 1887 Z-score: 1664.3 bits: 316.1 E(85289): 5.8e-86 Smith-Waterman score: 1887; 99.3% identity (99.6% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP :::::::::::::::::::::::::::::::::::::::::.: : XP_005 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKVRALGKNPRSWGKERAPNK 250 260 270 280 290 300 XP_005 HNLRPQSFKVKKEPKTRHSGFRL 310 320 >>NP_973730 (OMIM: 126380,610758) DNA excision repair pr (323 aa) initn: 1912 init1: 1887 opt: 1887 Z-score: 1664.3 bits: 316.1 E(85289): 5.8e-86 Smith-Waterman score: 1887; 99.3% identity (99.6% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 pF1KE2 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_973 MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_973 AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_973 WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_973 ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP :::::::::::::::::::::::::::::::::::::::::.: : NP_973 TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKVRALGKNPRSWGKERAPNK 250 260 270 280 290 300 NP_973 HNLRPQSFKVKKEPKTRHSGFRL 310 320 297 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:05:16 2016 done: Mon Nov 7 02:05:17 2016 Total Scan time: 8.180 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]