Result of FASTA (omim) for pFN21AE1348
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1348, 472 aa
  1>>>pF1KE1348 472 - 472 aa - 472 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8928+/-0.000487; mu= 20.1010+/- 0.030
 mean_var=64.4231+/-13.621, 0's: 0 Z-trim(108.5): 31  B-trim: 1896 in 2/49
 Lambda= 0.159791
 statistics sampled from 16579 (16598) to 16579 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.545), E-opt: 0.2 (0.195), width:  16
 Scan time:  8.720

The best scores are:                                      opt bits E(85289)
XP_005250771 (OMIM: 173510,608404,610938,611162) P ( 472) 3120 728.6 8.7e-210
NP_001120915 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
NP_000063 (OMIM: 173510,608404,610938,611162) plat ( 472) 3120 728.6 8.7e-210
NP_001001548 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
NP_001001547 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
XP_005250770 (OMIM: 173510,608404,610938,611162) P ( 472) 3120 728.6 8.7e-210
XP_005250772 (OMIM: 173510,608404,610938,611162) P ( 472) 3120 728.6 8.7e-210
NP_001120916 (OMIM: 173510,608404,610938,611162) p ( 472) 3120 728.6 8.7e-210
NP_001276840 (OMIM: 173510,608404,610938,611162) p ( 396) 2610 611.0 1.9e-174
NP_001276838 (OMIM: 173510,608404,610938,611162) p ( 412) 1797 423.6  5e-118
NP_001276837 (OMIM: 173510,608404,610938,611162) p ( 433) 1535 363.2  8e-100
NP_001076428 (OMIM: 601040,610762) scavenger recep ( 506)  970 233.0 1.5e-60
NP_005496 (OMIM: 601040,610762) scavenger receptor ( 509)  970 233.0 1.5e-60
NP_005497 (OMIM: 254900,602257) lysosome membrane  ( 478)  957 230.0 1.1e-59
NP_001191184 (OMIM: 254900,602257) lysosome membra ( 335)  570 140.7 6.1e-33


>>XP_005250771 (OMIM: 173510,608404,610938,611162) PREDI  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>NP_001120915 (OMIM: 173510,608404,610938,611162) plate  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>NP_000063 (OMIM: 173510,608404,610938,611162) platelet  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>NP_001001548 (OMIM: 173510,608404,610938,611162) plate  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>NP_001001547 (OMIM: 173510,608404,610938,611162) plate  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>XP_005250770 (OMIM: 173510,608404,610938,611162) PREDI  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>XP_005250772 (OMIM: 173510,608404,610938,611162) PREDI  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>NP_001120916 (OMIM: 173510,608404,610938,611162) plate  (472 aa)
 initn: 3120 init1: 3120 opt: 3120  Z-score: 3887.4  bits: 728.6 E(85289): 8.7e-210
Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 472 aa overlap (1-472:1-472)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              370       380       390       400       410       420

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              430       440       450       460       470  

>>NP_001276840 (OMIM: 173510,608404,610938,611162) plate  (396 aa)
 initn: 2610 init1: 2610 opt: 2610  Z-score: 3253.0  bits: 611.0 E(85289): 1.9e-174
Smith-Waterman score: 2610; 100.0% identity (100.0% similar) in 396 aa overlap (77-472:1-396)

         50        60        70        80        90       100      
pF1KE1 GTIAFKNWVKTGTEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQD
                                     ::::::::::::::::::::::::::::::
NP_001                               MMNSSNIQVKQRGPYTYRVRFLAKENVTQD
                                             10        20        30

        110       120       130       140       150       160      
pF1KE1 AEDNTVSFLQPNGAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEDNTVSFLQPNGAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSK
               40        50        60        70        80        90

        170       180       190       200       210       220      
pF1KE1 SSMFQVRTLRELLWGYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSMFQVRTLRELLWGYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAI
              100       110       120       130       140       150

        230       240       250       260       270       280      
pF1KE1 IDTYKGKRNLSYWESHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDTYKGKRNLSYWESHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLK
              160       170       180       190       200       210

        290       300       310       320       330       340      
pF1KE1 GIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIPVYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHF
              220       230       240       250       260       270

        350       360       370       380       390       400      
pF1KE1 LYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYASPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLK
              280       290       300       310       320       330

        410       420       430       440       450       460      
pF1KE1 RNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNYIVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCAC
              340       350       360       370       380       390

        470  
pF1KE1 RSKTIK
       ::::::
NP_001 RSKTIK
             

>>NP_001276838 (OMIM: 173510,608404,610938,611162) plate  (412 aa)
 initn: 2711 init1: 1791 opt: 1797  Z-score: 2239.9  bits: 423.6 E(85289): 5e-118
Smith-Waterman score: 2595; 87.3% identity (87.3% similar) in 472 aa overlap (1-472:1-412)

               10        20        30        40        50        60
pF1KE1 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCDRNCGLIAGAVIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTGTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 IFEPSLSVGTEADNFTVLNLAVAAASHIYQNQFVQMILNSLINKSKSSMFQVRTLRELLW
       :::::::::::::::::::::::                                     
NP_001 IFEPSLSVGTEADNFTVLNLAVA-------------------------------------
              130       140                                        

              190       200       210       220       230       240
pF1KE1 GYRDPFLSLVPYPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
                              :::::::::::::::::::::::::::::::::::::
NP_001 -----------------------YNNTADGVYKVFNGKDNISKVAIIDTYKGKRNLSYWE
                                  150       160       170       180

              250       260       270       280       290       300
pF1KE1 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIPVYRFVLPSKAF
              190       200       210       220       230       240

              310       320       330       340       350       360
pF1KE1 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYASPDVSEPIDGL
              250       260       270       280       290       300

              370       380       390       400       410       420
pF1KE1 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNYIVPILWLNETG
              310       320       330       340       350       360

              430       440       450       460       470  
pF1KE1 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSKTIK
              370       380       390       400       410  




472 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 02:09:19 2016 done: Mon Nov  7 02:09:21 2016
 Total Scan time:  8.720 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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