FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6318, 281 aa
  1>>>pF1KB6318 281 - 281 aa - 281 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8093+/-0.000782; mu= 13.1399+/- 0.047
 mean_var=77.2027+/-15.659, 0's: 0 Z-trim(108.5): 12  B-trim: 324 in 1/54
 Lambda= 0.145968
 statistics sampled from 10239 (10244) to 10239 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.315), width:  16
 Scan time:  2.300

The best scores are:                                      opt bits E(32554)
CCDS1509.1 NSL1 gene_id:25936|Hs108|chr1           ( 281) 1878 404.6 4.1e-113
CCDS73025.1 NSL1 gene_id:25936|Hs108|chr1          ( 172) 1109 242.5 1.5e-64
CCDS53474.1 NSL1 gene_id:25936|Hs108|chr1          ( 213) 1109 242.6 1.8e-64


>>CCDS1509.1 NSL1 gene_id:25936|Hs108|chr1                (281 aa)
 initn: 1878 init1: 1878 opt: 1878  Z-score: 2144.2  bits: 404.6 E(32554): 4.1e-113
Smith-Waterman score: 1878; 99.3% identity (99.6% similar) in 281 aa overlap (1-281:1-281)

               10        20        30        40        50        60
pF1KB6 MAGFPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
       ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MAGSPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPAPHMENLKCRGETV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPAPHMENLKCRGETV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 AKEISEAMKSLPALIEQGEGFSQVLRMQPVIHLQRIHQEVFSSCHRKPDAKPENFITQIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AKEISEAMKSLPALIEQGEGFSQVLRMQPVIHLQRIHQEVFSSCHRKPDAKPENFITQIE
              190       200       210       220       230       240

              250       260       270       280 
pF1KB6 TTPTETASRKTSDVVLKRKQTKDCPQRKWYPLRPKKINLDT
       :::::::::::::.:::::::::::::::::::::::::::
CCDS15 TTPTETASRKTSDMVLKRKQTKDCPQRKWYPLRPKKINLDT
              250       260       270       280 

>>CCDS73025.1 NSL1 gene_id:25936|Hs108|chr1               (172 aa)
 initn: 1109 init1: 1109 opt: 1109  Z-score: 1272.2  bits: 242.5 E(32554): 1.5e-64
Smith-Waterman score: 1109; 99.4% identity (99.4% similar) in 166 aa overlap (1-166:1-166)

               10        20        30        40        50        60
pF1KB6 MAGFPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
       ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MAGSPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPAPHMENLKCRGETV
       ::::::::::::::::::::::::::::::::::::::::::::::              
CCDS73 DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPVLACIN        
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KB6 AKEISEAMKSLPALIEQGEGFSQVLRMQPVIHLQRIHQEVFSSCHRKPDAKPENFITQIE

>>CCDS53474.1 NSL1 gene_id:25936|Hs108|chr1               (213 aa)
 initn: 1109 init1: 1109 opt: 1109  Z-score: 1270.8  bits: 242.6 E(32554): 1.8e-64
Smith-Waterman score: 1109; 99.4% identity (99.4% similar) in 166 aa overlap (1-166:1-166)

               10        20        30        40        50        60
pF1KB6 MAGFPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
       ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAGSPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPAPHMENLKCRGETV
       ::::::::::::::::::::::::::::::::::::::::::::::              
CCDS53 DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPVLNGNAFNFSPFNM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 AKEISEAMKSLPALIEQGEGFSQVLRMQPVIHLQRIHQEVFSSCHRKPDAKPENFITQIE
                                                                   
CCDS53 MLAVDLSYMVFITSSPSYGKFEMQRGNSSKGDQ                           
              190       200       210                              




281 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 07:33:51 2016 done: Sat Nov  5 07:33:52 2016
 Total Scan time:  2.300 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]