Result of FASTA (omim) for pFN21AE6250
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6250, 258 aa
  1>>>pF1KE6250 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4002+/-0.000301; mu= 17.1183+/- 0.019
 mean_var=111.1281+/-22.312, 0's: 0 Z-trim(119.7): 83  B-trim: 0 in 0/59
 Lambda= 0.121664
 statistics sampled from 33981 (34086) to 33981 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.4), width:  16
 Scan time:  5.770

The best scores are:                                      opt bits E(85289)
NP_000521 (OMIM: 118200,145900,159440,180800,60525 ( 248) 1665 302.1 6.1e-82
NP_001302420 (OMIM: 118200,145900,159440,180800,60 ( 312) 1665 302.3 7.1e-82
XP_016856810 (OMIM: 118200,145900,159440,180800,60 ( 240) 1529 278.3 9.1e-75
NP_003944 (OMIM: 604376) myelin protein zero-like  ( 269)  427 84.9 1.7e-16
NP_078845 (OMIM: 604376) myelin protein zero-like  ( 209)  420 83.5 3.3e-16
NP_938016 (OMIM: 611707) myelin protein zero-like  ( 235)  366 74.1 2.5e-13
NP_001273081 (OMIM: 611707) myelin protein zero-li ( 223)  355 72.1 9.4e-13
NP_658911 (OMIM: 604873) myelin protein zero-like  ( 215)  349 71.1 1.9e-12
NP_005788 (OMIM: 604873) myelin protein zero-like  ( 215)  349 71.1 1.9e-12
XP_006718838 (OMIM: 611707) PREDICTED: myelin prot ( 217)  343 70.0   4e-12
XP_016872793 (OMIM: 611707) PREDICTED: myelin prot ( 219)  343 70.0   4e-12
NP_004579 (OMIM: 601327,615378) sodium channel sub ( 215)  255 54.6 1.8e-07
NP_777594 (OMIM: 608256,611819) sodium channel sub ( 228)  231 50.4 3.4e-06
NP_001035241 (OMIM: 608214,613120) sodium channel  ( 215)  229 50.0 4.2e-06
XP_011541199 (OMIM: 608214,613120) PREDICTED: sodi ( 215)  229 50.0 4.2e-06
NP_060870 (OMIM: 608214,613120) sodium channel sub ( 215)  229 50.0 4.2e-06
NP_872413 (OMIM: 300620) V-set and immunoglobulin  ( 387)  218 48.4 2.3e-05
NP_976031 (OMIM: 225060,600644) nectin-1 isoform 3 ( 352)  192 43.8 0.00052
NP_976030 (OMIM: 225060,600644) nectin-1 isoform 2 ( 458)  192 43.9 0.00062
NP_002846 (OMIM: 225060,600644) nectin-1 isoform 1 ( 517)  192 44.0 0.00067
NP_001273500 (OMIM: 609770) junctional adhesion mo ( 355)  172 40.3  0.0059
NP_001273499 (OMIM: 609770) junctional adhesion mo ( 355)  172 40.3  0.0059
NP_694938 (OMIM: 609770) junctional adhesion molec ( 384)  172 40.3  0.0063
XP_005271464 (OMIM: 609770) PREDICTED: junctional  ( 384)  172 40.3  0.0063
NP_001091996 (OMIM: 609770) junctional adhesion mo ( 394)  172 40.3  0.0064
XP_016872702 (OMIM: 609770) PREDICTED: junctional  ( 416)  172 40.3  0.0066


>>NP_000521 (OMIM: 118200,145900,159440,180800,605253,60  (248 aa)
 initn: 1665 init1: 1665 opt: 1665  Z-score: 1592.1  bits: 302.1 E(85289): 6.1e-82
Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 248 aa overlap (11-258:1-248)

               10        20        30        40        50        60
pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000           MAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                         10        20        30        40        50

               70        80        90       100       110       120
pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
               60        70        80        90       100       110

              130       140       150       160       170       180
pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
              120       130       140       150       160       170

              190       200       210       220       230       240
pF1KE6 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK
              180       190       200       210       220       230

              250        
pF1KE6 AVSEKKAKGLGESRKDKK
       ::::::::::::::::::
NP_000 AVSEKKAKGLGESRKDKK
              240        

>>NP_001302420 (OMIM: 118200,145900,159440,180800,605253  (312 aa)
 initn: 1665 init1: 1665 opt: 1665  Z-score: 1590.9  bits: 302.3 E(85289): 7.1e-82
Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 248 aa overlap (11-258:1-248)

               10        20        30        40        50        60
pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001           MAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                         10        20        30        40        50

               70        80        90       100       110       120
pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
               60        70        80        90       100       110

              130       140       150       160       170       180
pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
              120       130       140       150       160       170

              190       200       210       220       230       240
pF1KE6 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK
              180       190       200       210       220       230

              250                                                  
pF1KE6 AVSEKKAKGLGESRKDKK                                          
       ::::::::::::::::::                                          
NP_001 AVSEKKAKGLGESRKDKKXRLAGRAGDRGLGVESAKGPKVMVIEMELRKDEQSPELRPAV
              240       250       260       270       280       290

>>XP_016856810 (OMIM: 118200,145900,159440,180800,605253  (240 aa)
 initn: 1529 init1: 1529 opt: 1529  Z-score: 1463.3  bits: 278.3 E(85289): 9.1e-75
Smith-Waterman score: 1529; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)

               10        20        30        40        50        60
pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK
       :::::::::::::::::::::::::::::::::::::::::::::               
XP_016 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQGFYNNQMRSCVWKTL
              190       200       210       220       230       240

              250        
pF1KE6 AVSEKKAKGLGESRKDKK

>>NP_003944 (OMIM: 604376) myelin protein zero-like prot  (269 aa)
 initn: 494 init1: 382 opt: 427  Z-score: 417.3  bits: 84.9 E(85289): 1.7e-16
Smith-Waterman score: 456; 36.8% identity (65.6% similar) in 250 aa overlap (2-236:1-247)

               10        20          30        40        50        
pF1KE6 MLRAPAPAPAMAPGAPSSSPS--PILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTL
        . : : : :.  .::.:      .::. :  .:. . ..:. ::: .:.  : :..  :
NP_003  MAASAGAGAVI-AAPDSRRWLWSVLAAAL--GLLTAGVSALEVYTPKEIFVANGTQGKL
                10         20          30        40        50      

       60        70        80        90       100       110        
pF1KE6 HCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWK
        :.: :.  ..   : .: .::::.  ..:.:::..:: :. .   ::.::.:.::   :
NP_003 TCKFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKK
         60        70        80        90       100       110      

      120       130       140       150         160        170     
pF1KE6 DGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK--VPTR-YGVVLGAVIGGV
       :.:: :.:...  :::. :::::::::: . ... ::: ::  .:.    ::.: : . :
NP_003 DASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVV
        120       130       140       150       160       170      

         180        190          200       210             220     
pF1KE6 LGVVLLLLLLFYVV-RYCWLRRQ---AALQRRLSAMEKGKLHKPG------KDASKRGRQ
       ::..::. ... :. :    .:.    . .. :: ....  ..:.      :.  . ..:
NP_003 LGLTLLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQ
        180       190       200       210       220       230      

         230       240       250        
pF1KE6 TPVLYAMLDHSRSTKAVSEKKAKGLGESRKDKK
        ::.::.::::                      
NP_003 GPVIYAQLDHSGGHHSDKINKSESVVYADIRKN
        240       250       260         

>>NP_078845 (OMIM: 604376) myelin protein zero-like prot  (209 aa)
 initn: 445 init1: 382 opt: 420  Z-score: 412.0  bits: 83.5 E(85289): 3.3e-16
Smith-Waterman score: 420; 39.9% identity (67.9% similar) in 193 aa overlap (2-189:1-190)

               10        20          30        40        50        
pF1KE6 MLRAPAPAPAMAPGAPSSSPS--PILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTL
        . : : : :.  .::.:      .::. :  .:. . ..:. ::: .:.  : :..  :
NP_078  MAASAGAGAVI-AAPDSRRWLWSVLAAAL--GLLTAGVSALEVYTPKEIFVANGTQGKL
                10         20          30        40        50      

       60        70        80        90       100       110        
pF1KE6 HCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWK
        :.: :.  ..   : .: .::::.  ..:.:::..:: :. .   ::.::.:.::   :
NP_078 TCKFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKK
         60        70        80        90       100       110      

      120       130       140       150         160        170     
pF1KE6 DGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK--VPTR-YGVVLGAVIGGV
       :.:: :.:...  :::. :::::::::: . ... ::: ::  .:.    ::.: : . :
NP_078 DASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVV
        120       130       140       150       160       170      

         180       190       200       210       220       230     
pF1KE6 LGVVLLLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDH
       ::..::. ... :.                                              
NP_078 LGLTLLISMILAVLYRRKNSKRDYTGAQSYMHS                           
        180       190       200                                    

>>NP_938016 (OMIM: 611707) myelin protein zero-like prot  (235 aa)
 initn: 271 init1: 179 opt: 366  Z-score: 360.1  bits: 74.1 E(85289): 2.5e-13
Smith-Waterman score: 366; 33.7% identity (67.9% similar) in 196 aa overlap (12-203:6-191)

               10        20        30        40        50        60
pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                  : :. . .  :.:.::.:... .  . .. . .: .:.: :: .. :.:
NP_938       MQQRGAAGSRGCALFPLLGVLFFQGVYI--VFSLEIRADAHVRGYVGEKIKLKC
                     10        20          30        40        50  

               70        80        90       100       110       120
pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
       .: :.  :.: ... : :.: ..  ..::::: . : :   .:::..::.:::.    :.
NP_938 TFKSTSDVTDKLTIDWTYRPPSSSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDA
             60        70        80         90       100       110 

              130       140       150       160       170       180
pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL
       :: : :   .:::::.: ::::::.  .  .. : : :.    .:..:..:  ..:....
NP_938 SISISNPTIKDNGTFSCAVKNPPDVHHNIPMTELTVTER---GFGTMLSSV--ALLSILV
             120       130       140       150            160      

                  190       200       210       220       230      
pF1KE6 LL----LLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHS
       ..    .. . .::.   :. :.:..:                                 
NP_938 FVPSAVVVALLLVRMG--RKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCA
        170       180         190       200       210       220    

>>NP_001273081 (OMIM: 611707) myelin protein zero-like p  (223 aa)
 initn: 271 init1: 179 opt: 355  Z-score: 350.0  bits: 72.1 E(85289): 9.4e-13
Smith-Waterman score: 355; 35.1% identity (67.2% similar) in 174 aa overlap (34-203:14-179)

            10        20        30        40        50        60   
pF1KE6 APAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFW
                                     : :  ... . : .:.: :: .. :.:.: 
NP_001                  MQQRGAAGSRGCALFPLLGVLFFQDAHVRGYVGEKIKLKCTFK
                                10        20        30        40   

            70        80        90       100       110       120   
pF1KE6 SSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIV
       :.  :.: ... : :.: ..  ..::::: . : :   .:::..::.:::.    :.:: 
NP_001 STSDVTDKLTIDWTYRPPSSSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDASIS
            50        60        70         80        90       100  

           130       140       150       160       170       180   
pF1KE6 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVLLL-
       : :   .:::::.: ::::::.  .  .. : : :.    .:..:..:  ..:...... 
NP_001 ISNPTIKDNGTFSCAVKNPPDVHHNIPMTELTVTER---GFGTMLSSV--ALLSILVFVP
            110       120       130          140         150       

               190       200       210       220       230         
pF1KE6 ---LLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRST
          .. . .::.   :. :.:..:                                    
NP_001 SAVVVALLLVRMG--RKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECL
       160       170         180       190       200       210     

>>NP_658911 (OMIM: 604873) myelin protein zero-like prot  (215 aa)
 initn: 229 init1: 203 opt: 349  Z-score: 344.5  bits: 71.1 E(85289): 1.9e-12
Smith-Waterman score: 349; 31.6% identity (65.8% similar) in 193 aa overlap (18-208:5-192)

               10        20        30        40        50        60
pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                        ::   .: .: ..  .: :  :. .::.: .... :. . :.:
NP_658              MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKC
                            10        20        30        40       

               70        80        90       100       110       120
pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
       .: :   :.: .. :: ..:  :     .:.: . .:.    : ::.:..: :.:.  :.
NP_658 TFSSFAPVGDALTVTWNFRPLDGGPEQFVFYY-HIDPFQPMSGRFKDRVSWDGNPERYDA
        50        60        70         80        90       100      

              130       140       150       160         170        
pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVV--LGAVIGGVLGV
       ::.. .:...::::.::.::::::. :  ... : : . :  :.. .  :. .::..   
NP_658 SILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRLSVVHTV--RFSEIHFLALAIGSA--C
        110       120       130       140         150       160    

      180       190       200       210       220       230        
pF1KE6 VLLLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRS
       .:...... :: .   :..   .:  ...:                              
NP_658 ALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD       
            170       180       190       200       210            

>>NP_005788 (OMIM: 604873) myelin protein zero-like prot  (215 aa)
 initn: 229 init1: 203 opt: 349  Z-score: 344.5  bits: 71.1 E(85289): 1.9e-12
Smith-Waterman score: 349; 31.6% identity (65.8% similar) in 193 aa overlap (18-208:5-192)

               10        20        30        40        50        60
pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC
                        ::   .: .: ..  .: :  :. .::.: .... :. . :.:
NP_005              MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKC
                            10        20        30        40       

               70        80        90       100       110       120
pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG
       .: :   :.: .. :: ..:  :     .:.: . .:.    : ::.:..: :.:.  :.
NP_005 TFSSFAPVGDALTVTWNFRPLDGGPEQFVFYY-HIDPFQPMSGRFKDRVSWDGNPERYDA
        50        60        70         80        90       100      

              130       140       150       160         170        
pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVV--LGAVIGGVLGV
       ::.. .:...::::.::.::::::. :  ... : : . :  :.. .  :. .::..   
NP_005 SILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRLSVVHTV--RFSEIHFLALAIGSA--C
        110       120       130       140         150       160    

      180       190       200       210       220       230        
pF1KE6 VLLLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRS
       .:...... :: .   :..   .:  ...:                              
NP_005 ALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD       
            170       180       190       200       210            

>>XP_006718838 (OMIM: 611707) PREDICTED: myelin protein   (217 aa)
 initn: 252 init1: 179 opt: 343  Z-score: 338.7  bits: 70.0 E(85289): 4e-12
Smith-Waterman score: 343; 35.5% identity (68.1% similar) in 166 aa overlap (42-203:16-173)

              20        30        40        50        60        70 
pF1KE6 APGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFWSSEWVSDD
                                     . .: .:.: :: .. :.:.: :.  :.: 
XP_006                MSGFGRRVYIVFSLEIRADAHVRGYVGEKIKLKCTFKSTSDVTDK
                              10        20        30        40     

              80        90       100       110       120       130 
pF1KE6 ISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHNLDYSD
       ... : :.: ..  ..::::: . : :   .:::..::.:::.    :.:: : :   .:
XP_006 LTIDWTYRPPSSSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDASISISNPTIKD
          50        60        70         80        90       100    

             140       150       160       170       180           
pF1KE6 NGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVLLL----LLLFY
       ::::.: ::::::.  .  .. : : :.    .:..:..:  ..:......    .. . 
XP_006 NGTFSCAVKNPPDVHHNIPMTELTVTER---GFGTMLSSV--ALLSILVFVPSAVVVALL
          110       120       130          140         150         

       190       200       210       220       230       240       
pF1KE6 VVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTKAVSEKKA
       .::.   :. :.:..:                                            
XP_006 LVRMG--RKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECLDSDYEETY
     160         170       180       190       200       210       




258 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 11:27:53 2016 done: Tue Nov  8 11:27:53 2016
 Total Scan time:  5.770 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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