FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1371, 195 aa 1>>>pF1KE1371 195 - 195 aa - 195 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.3389+/-0.000737; mu= 2.4733+/- 0.045 mean_var=199.3295+/-38.920, 0's: 0 Z-trim(117.1): 3 B-trim: 0 in 0/56 Lambda= 0.090842 statistics sampled from 17775 (17777) to 17775 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.831), E-opt: 0.2 (0.546), width: 16 Scan time: 2.080 The best scores are: opt bits E(32554) CCDS32504.1 CYBA gene_id:1535|Hs108|chr16 ( 195) 1321 184.0 5.2e-47 >>CCDS32504.1 CYBA gene_id:1535|Hs108|chr16 (195 aa) initn: 1321 init1: 1321 opt: 1321 Z-score: 957.5 bits: 184.0 E(32554): 5.2e-47 Smith-Waterman score: 1321; 99.5% identity (100.0% similar) in 195 aa overlap (1-195:1-195) 10 20 30 40 50 60 pF1KE1 MGQIEWAMWANEQALASGLILITGGIVATAGRFTQWYFGAYSIVAGVFVCLLEYPRGKRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MGQIEWAMWANEQALASGLILITGGIVATAGRFTQWYFGAYSIVAGVFVCLLEYPRGKRK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KGSTMERWGQKYMTAVVKLFGPFTRNYYVRAVLHLLLSVPAGFLLATILGTACLAIASGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KGSTMERWGQKYMTAVVKLFGPFTRNYYVRAVLHLLLSVPAGFLLATILGTACLAIASGI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YLLAAVRGEQWTPIEPKPRERPQIGGTIKQPPSNPPPRPPAEARKKPSEEEAAAAAGGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: CCDS32 YLLAAVRGEQWTPIEPKPRERPQIGGTIKQPPSNPPPRPPAEARKKPSEEEAAVAAGGPP 130 140 150 160 170 180 190 pF1KE1 GGPQVNPIPVTDEVV ::::::::::::::: CCDS32 GGPQVNPIPVTDEVV 190 195 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:16:09 2016 done: Mon Nov 7 02:16:10 2016 Total Scan time: 2.080 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]