FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6140, 170 aa 1>>>pF1KE6140 170 - 170 aa - 170 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4545+/-0.00061; mu= 7.9790+/- 0.037 mean_var=89.1121+/-17.338, 0's: 0 Z-trim(113.7): 13 B-trim: 9 in 1/51 Lambda= 0.135864 statistics sampled from 14312 (14324) to 14312 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.44), width: 16 Scan time: 2.130 The best scores are: opt bits E(32554) CCDS30611.1 HSPB7 gene_id:27129|Hs108|chr1 ( 170) 1108 226.0 9e-60 >>CCDS30611.1 HSPB7 gene_id:27129|Hs108|chr1 (170 aa) initn: 1108 init1: 1108 opt: 1108 Z-score: 1186.6 bits: 226.0 E(32554): 9e-60 Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 170 aa overlap (1-170:1-170) 10 20 30 40 50 60 pF1KE6 MSHRTSSTFRAERSFHSSSSSSSSSTSSSASRALPAQDPPMEKALSMFSDDFGSFMRPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MSHRTSSTFRAERSFHSSSSSSSSSTSSSASRALPAQDPPMEKALSMFSDDFGSFMRPHS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 EPLAFPARPGGAGNIKTLGDAYEFAVDVRDFSPEDIIVTTSNNHIEVRAEKLAADGTVMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 EPLAFPARPGGAGNIKTLGDAYEFAVDVRDFSPEDIIVTTSNNHIEVRAEKLAADGTVMN 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 TFAHKCQLPEDVDPTSVTSALREDGSLTIRARRHPHTEHVQQTFRTEIKI :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 TFAHKCQLPEDVDPTSVTSALREDGSLTIRARRHPHTEHVQQTFRTEIKI 130 140 150 160 170 170 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:48:29 2016 done: Tue Nov 8 09:48:30 2016 Total Scan time: 2.130 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]