Result of FASTA (ccds) for
pFN21AB5769
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5769, 750 aa
1>>>pF1KB5769 750 - 750 aa - 750 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6637+/-0.000851; mu= 5.8203+/- 0.051
mean_var=193.8504+/-38.948, 0's: 0 Z-trim(114.4): 120 B-trim: 82 in 2/49
Lambda= 0.092117
statistics sampled from 14831 (14960) to 14831 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.46), width: 16
Scan time: 5.010
The best scores are: opt bits E(32554)
CCDS81705.1 ARHGAP9 gene_id:64333|Hs108|chr12 ( 821) 5135 695.1 1.1e-199
CCDS44929.1 ARHGAP9 gene_id:64333|Hs108|chr12 ( 640) 3056 418.7 1.4e-116
CCDS8941.2 ARHGAP9 gene_id:64333|Hs108|chr12 ( 731) 3056 418.8 1.5e-116
CCDS44928.1 ARHGAP9 gene_id:64333|Hs108|chr12 ( 547) 1954 272.2 1.5e-72
CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17 ( 548) 463 74.1 6.6e-13
CCDS74082.1 ARHGAP27 gene_id:201176|Hs108|chr17 ( 889) 463 74.2 9.7e-13
CCDS2184.1 ARHGAP15 gene_id:55843|Hs108|chr2 ( 475) 445 71.7 3.1e-12
>>CCDS81705.1 ARHGAP9 gene_id:64333|Hs108|chr12 (821 aa)
initn: 5135 init1: 5135 opt: 5135 Z-score: 3698.3 bits: 695.1 E(32554): 1.1e-199
Smith-Waterman score: 5135; 99.9% identity (100.0% similar) in 750 aa overlap (1-750:72-821)
10 20 30
pF1KB5 MLSSRWWPSSWGILGLGPRSPPRGSQLCAL
::::::::::::::::::::::::::::::
CCDS81 EEWPDSHHYPGPTPAPESSDGPHKVTVLATMLSSRWWPSSWGILGLGPRSPPRGSQLCAL
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB5 YAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 YAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPS
110 120 130 140 150 160
100 110 120 130 140 150
pF1KB5 QSPTTVIPGQLLWTPGPKLFHGSLEELSQALPSRAQASSEQPPPLPRKMCRSVSTDNLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QSPTTVIPGQLLWTPGPKLFHGSLEELSQALPSRAQASSEQPPPLPRKMCRSVSTDNLSP
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB5 SFLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPAC
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 SLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPAC
230 240 250 260 270 280
220 230 240 250 260 270
pF1KB5 PLLQRLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PLLQRLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVL
290 300 310 320 330 340
280 290 300 310 320 330
pF1KB5 QPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLN
350 360 370 380 390 400
340 350 360 370 380 390
pF1KB5 MTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAAL
410 420 430 440 450 460
400 410 420 430 440 450
pF1KB5 AHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTG
470 480 490 500 510 520
460 470 480 490 500 510
pF1KB5 RDQGSGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RDQGSGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQN
530 540 550 560 570 580
520 530 540 550 560 570
pF1KB5 RVRNKLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RVRNKLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRG
590 600 610 620 630 640
580 590 600 610 620 630
pF1KB5 LDVDGIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LDVDGIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVV
650 660 670 680 690 700
640 650 660 670 680 690
pF1KB5 TGALKLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TGALKLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLE
710 720 730 740 750 760
700 710 720 730 740 750
pF1KB5 HLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
770 780 790 800 810 820
>>CCDS44929.1 ARHGAP9 gene_id:64333|Hs108|chr12 (640 aa)
initn: 3050 init1: 3050 opt: 3056 Z-score: 2206.6 bits: 418.7 E(32554): 1.4e-116
Smith-Waterman score: 4331; 97.0% identity (97.1% similar) in 658 aa overlap (1-658:1-639)
10 20 30 40 50 60
pF1KB5 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAG
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS44 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSLLKPFQEGPSGRSLSQEDLPSEASASTAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 TELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDE
::::::::::::::::: ::::::::::::::::::::::::
CCDS44 TELRAWHRALRTVIERL-------------------DRENPLELRLSGSGPAELSAGEDE
430 440 450 460
490 500 510 520 530 540
pF1KB5 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB5 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB5 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALG
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB5 SESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRP
>>CCDS8941.2 ARHGAP9 gene_id:64333|Hs108|chr12 (731 aa)
initn: 3050 init1: 3050 opt: 3056 Z-score: 2205.8 bits: 418.8 E(32554): 1.5e-116
Smith-Waterman score: 4953; 97.3% identity (97.5% similar) in 750 aa overlap (1-750:1-731)
10 20 30 40 50 60
pF1KB5 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 WWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAG
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS89 LPSRAQASSEQPPPLPRKMCRSVSTDNLSPSLLKPFQEGPSGRSLSQEDLPSEASASTAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 PQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 QLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 REPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 TELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDE
::::::::::::::::: ::::::::::::::::::::::::
CCDS89 TELRAWHRALRTVIERL-------------------DRENPLELRLSGSGPAELSAGEDE
430 440 450 460
490 500 510 520 530 540
pF1KB5 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 EEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVF
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB5 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
530 540 550 560 570 580
610 620 630 640 650 660
pF1KB5 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALAL
590 600 610 620 630 640
670 680 690 700 710 720
pF1KB5 SESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRP
650 660 670 680 690 700
730 740 750
pF1KB5 EQETSDPAAHALYPGQLVQLMLTNFTSLFP
::::::::::::::::::::::::::::::
CCDS89 EQETSDPAAHALYPGQLVQLMLTNFTSLFP
710 720 730
>>CCDS44928.1 ARHGAP9 gene_id:64333|Hs108|chr12 (547 aa)
initn: 1954 init1: 1954 opt: 1954 Z-score: 1416.1 bits: 272.2 E(32554): 1.5e-72
Smith-Waterman score: 3693; 96.6% identity (96.6% similar) in 566 aa overlap (185-750:1-547)
160 170 180 190 200 210
pF1KB5 PFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQ
::::::::::::::::::::::::::::::
CCDS44 MSEPPVYCNLVDLRRCPRSPPPGPACPLLQ
10 20 30
220 230 240 250 260 270
pF1KB5 RLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQA
40 50 60 70 80 90
280 290 300 310 320 330
pF1KB5 KGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKI
100 110 120 130 140 150
340 350 360 370 380 390
pF1KB5 AQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGR
160 170 180 190 200 210
400 410 420 430 440 450
pF1KB5 HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQG
:::::::::::::::::::::::::::::::::::::::::::
CCDS44 HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL-----------------
220 230 240 250
460 470 480 490 500 510
pF1KB5 SGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 --DRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRN
260 270 280 290 300 310
520 530 540 550 560 570
pF1KB5 KLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVD
320 330 340 350 360 370
580 590 600 610 620 630
pF1KB5 GIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGAL
380 390 400 410 420 430
640 650 660 670 680 690
pF1KB5 KLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCR
440 450 460 470 480 490
700 710 720 730 740 750
pF1KB5 VIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
500 510 520 530 540
>>CCDS11498.1 ARHGAP27 gene_id:201176|Hs108|chr17 (548 aa)
initn: 999 init1: 461 opt: 463 Z-score: 345.2 bits: 74.1 E(32554): 6.6e-13
Smith-Waterman score: 1095; 36.3% identity (59.9% similar) in 604 aa overlap (171-750:13-546)
150 160 170 180 190
pF1KB5 RSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEP-----PVYCNLV
: . : :. : : : ::
CCDS11 MQPGLSPGSPGDPRPPTPETDYPESLTSYPEEDYSPVGSFGE
10 20 30 40
200 210 220 230 240
pF1KB5 DLRRCPRSPPPGPACPLLQ----------RLDAWEQHLDPNSGRCFYINSLTGCKSWKPP
: . ::: .: . : . : . ::. :. .. : . :. :
CCDS11 PGPTSPLTTPPGWSCHVSQDKQMLYTNHFTQEQWVRLEDPH-GKPYFYNPEDSSVRWELP
50 60 70 80 90 100
250 260 270 280 290 300
pF1KB5 RRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPP
. : :.. : ..: : :.. . .: :: :: ...: :
CCDS11 QVPVP--APRSIH-----KSSQDGDTP-AQASPPEEKVPAELDEVGSW---EEVS----P
110 120 130 140
310 320 330 340 350 360
pF1KB5 ALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRK-NWGPSWVVLTGNSLVFYREPP
: : : . :: :.:.:. :: :. :..::: .:. ::.:: :. :.:...
CCDS11 ATAAVRT--KTLD------KAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSK
150 160 170 180 190
370 380 390 400 410 420
pF1KB5 PTAPSSGWGPAG-SRPESSVDLRGAALAHG-RHLSSRRNVLHIRTIPGHEFLLQSDHETE
.: .. :. : :: .:.::::.:. . . :::.:::..:. : :.:.: : :.
CCDS11 TSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAI
200 210 220 230 240 250
430 440 450 460 470 480
pF1KB5 LRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDEEE
. .::.:. :..: . .. . : ::..: . : : ::.
CCDS11 ISTWHKAIAQGIQELSAELPPEESESSRVDFGSSERLG--------------SWQEKEED
260 270 280 290 300
490 500 510 520 530 540
pF1KB5 ESELVSKPLLRLSSRRSSIRGPEGTEQN--RVRNKLKRLIAKRPPLQSLQERGLLRDQVF
.. : : :: : :.. .::.::.... .:: ::::.:.: ..::::
CCDS11 ARPNAAAPAL----------GPVGLESDLSKVRHKLRKFLQRRPTLQSLREKGYIKDQVF
310 320 330 340 350
550 560 570 580 590 600
pF1KB5 GCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVT
:: : .::.:: . :: :.. :: ::. ::::.::.::.:::::..::::. ::...
CCDS11 GCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHDE---
360 370 380 390 400 410
610 620 630 640 650
pF1KB5 SDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFR---AA
:::::. .:.:.::.:::::::.::::.:: : . ::: ::
CCDS11 ---------------RLDLDDGRWEDVHVITGALKLFFRELPEPLFP---FSHFRQFIAA
420 430 440 450
660 670 680 690 700 710
pF1KB5 LALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTL
. :... . ...:. :.: :::::::.:..:::::: :...:::. ....:::::::
CCDS11 IKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTL
460 470 480 490 500 510
720 730 740 750
pF1KB5 FRPE-QETSDPAAHALYPGQLVQLMLTNFTSLFP
.::: .::: : . .. .:.:.:.: . ...::
CCDS11 LRPEVEETSMPMTM-VFQNQVVELILQQCADIFPPH
520 530 540
>>CCDS74082.1 ARHGAP27 gene_id:201176|Hs108|chr17 (889 aa)
initn: 1168 init1: 461 opt: 463 Z-score: 342.2 bits: 74.2 E(32554): 9.7e-13
Smith-Waterman score: 1096; 35.8% identity (59.6% similar) in 614 aa overlap (158-750:341-887)
130 140 150 160 170 180
pF1KB5 SSEQPPPLPRKMCRSVSTDNLSPSFLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSE
: : : .. : . : :. : :
CCDS74 EESRRVFFYNPLTGETAWEDEAENEPEEELEMQPGLSPGSPGDPRPPTPETDYPESLTSY
320 330 340 350 360 370
190 200 210 220 230
pF1KB5 P-----PVYCNLVDLRRCPRSPPPGPACPLLQ----------RLDAWEQHLDPNSGRCFY
: :: : . ::: .: . : . : . ::. :. ..
CCDS74 PEEDYSPVGSFGEPGPTSPLTTPPGWSCHVSQDKQMLYTNHFTQEQWVRLEDPH-GKPYF
380 390 400 410 420
240 250 260 270 280 290
pF1KB5 INSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGS
: . :. :. : :.. : ..: : :.. . .: :: ::
CCDS74 YNPEDSSVRWELPQVPVPA--PRSIH-----KSSQDGDTP-AQASPPEEKVPAELDEVGS
430 440 450 460 470 480
300 310 320 330 340 350
pF1KB5 LSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRK-NWGPSWVV
...: :: : : . :: :.:.:. :: :. :..::: .:. ::.:
CCDS74 W---EEVS----PATAAVR--TKTLD------KAGVLHRTKTADKGKRLRKKHWSASWTV
490 500 510 520
360 370 380 390 400
pF1KB5 LTGNSLVFYREPPPTAPSSGWGPAG-SRPESSVDLRGAALAHG-RHLSSRRNVLHIRTIP
: :. :.:... .: .. :. : :: .:.::::.:. . . :::.:::..:.
CCDS74 LEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRD
530 540 550 560 570 580
410 420 430 440 450 460
pF1KB5 GHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGS
: :.:.: : :. . .::.:. :..: . .. . : ::..: .
CCDS74 GSEYLIQHDSEAIISTWHKAIAQGIQELSAELPPEESESSRVDFGSSERLG---------
590 600 610 620 630
470 480 490 500 510 520
pF1KB5 GPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQN--RVRNKLKRLIAKRPPLQ
: : ::. .. : : :: : :.. .::.::.... .:: ::
CCDS74 -----SWQEKEEDARPNAAAPAL----------GPVGLESDLSKVRHKLRKFLQRRPTLQ
640 650 660 670 680
530 540 550 560 570 580
pF1KB5 SLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQ
::.:.: ..:::::: : .::.:: . :: :.. :: ::. ::::.::.::.:::::..:
CCDS74 SLREKGYIKDQVFGCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQ
690 700 710 720 730 740
590 600 610 620 630 640
pF1KB5 KLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVP
:::. ::... :::::. .:.:.::.:::::::.::::.:: :
CCDS74 KLRYKVDHDE------------------RLDLDDGRWEDVHVITGALKLFFRELPEPLFP
750 760 770 780
650 660 670 680 690 700
pF1KB5 PLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPH
. .: ::. :... . ...:. :.: :::::::.:..:::::: :...:::. .
CCDS74 FSHFRQFIAAIKLQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQ
790 800 810 820 830 840
710 720 730 740 750
pF1KB5 NLGIVFGPTLFRPE-QETSDPAAHALYPGQLVQLMLTNFTSLFP
...:::::::.::: .::: : . .. .:.:.:.: . ...::
CCDS74 SVAIVFGPTLLRPEVEETSMPMTM-VFQNQVVELILQQCADIFPPH
850 860 870 880
>>CCDS2184.1 ARHGAP15 gene_id:55843|Hs108|chr2 (475 aa)
initn: 1134 init1: 445 opt: 445 Z-score: 333.1 bits: 71.7 E(32554): 3.1e-12
Smith-Waterman score: 1104; 42.1% identity (71.7% similar) in 442 aa overlap (312-749:74-470)
290 300 310 320 330 340
pF1KB5 GTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKL
:: ::. ::: : :. .:::.::.::
CCDS21 MILTDVGKVTEPISRHRRNHSQHILKDVIPPLEQLM-----VEKEGYLQKAKIADGGKKL
50 60 70 80 90
350 360 370 380 390 400
pF1KB5 RKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRN
::::. ::.::.. . ::.: : :. .: .::: ::: :: . ... :::.:
CCDS21 RKNWSTSWIVLSSRRIEFYKESKQQALSNM--KTGHKPES-VDLCGAHIEWAKEKSSRKN
100 110 120 130 140 150
410 420 430 440 450 460
pF1KB5 VLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENP
:..: :. :.::::::: . . : .:....:.:: : .:.. .:.
CCDS21 VFQITTVSGNEFLLQSDIDFIILDWFHAIKNAIDRL----------P--KDSSCPSRN--
160 170 180 190 200
470 480 490 500 510
pF1KB5 LEL-RLSGSGPAELSAGED---EEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLK
::: ... :. .:: . : .:.. : .. ..:: : . ...:::...::
CCDS21 LELFKIQRSSSTELLSHYDSDIKEQKPEHRKSLMFRLHHSAS-----DTSDKNRVKSRLK
210 220 230 240 250
520 530 540 550 560 570
pF1KB5 RLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIY
..:..:: :..:::.::..::.:: .:...:.::..::: :.. :: ::.::::::::::
CCDS21 KFITRRPSLKTLQEKGLIKDQIFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIY
260 270 280 290 300 310
580 590 600 610 620 630
pF1KB5 RVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLF
:::::::..:::::.:. :: .:.::...:.::::::::::.:
CCDS21 RVSGNLATIQKLRFIVN------------------QEEKLNLDDSQWEDIHVVTGALKMF
320 330 340 350
640 650 660 670 680 690
pF1KB5 LRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIA
.::::.:: : .. .: :. .... . .. :. ..: ::.::.. :. :: ...:
CCDS21 FRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVA
360 370 380 390 400 410
700 710 720 730 740 750
pF1KB5 HSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP
...:: :. ..:::::::::.: :.::.. : : .: .:...:::......:
CCDS21 KASKNLMSTQSLGIVFGPTLLRAENETGNMAIHMVYQNQIAELMLSEYSKIFGSEED
420 430 440 450 460 470
750 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:36:41 2016 done: Sat Nov 5 07:36:42 2016
Total Scan time: 5.010 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]