FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1362, 312 aa 1>>>pF1KE1362 312 - 312 aa - 312 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1398+/-0.000754; mu= 5.0100+/- 0.046 mean_var=173.4591+/-35.498, 0's: 0 Z-trim(115.7): 2 B-trim: 440 in 1/51 Lambda= 0.097381 statistics sampled from 16259 (16260) to 16259 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.499), width: 16 Scan time: 3.060 The best scores are: opt bits E(32554) CCDS10829.1 TRADD gene_id:8717|Hs108|chr16 ( 312) 2065 301.2 6.5e-82 >>CCDS10829.1 TRADD gene_id:8717|Hs108|chr16 (312 aa) initn: 2065 init1: 2065 opt: 2065 Z-score: 1584.0 bits: 301.2 E(32554): 6.5e-82 Smith-Waterman score: 2065; 100.0% identity (100.0% similar) in 312 aa overlap (1-312:1-312) 10 20 30 40 50 60 pF1KE1 MAAGQNGHEEWVGSAYLFVESSLDKVVLSDAYAHPQQKVAVYRALQAALAESGGSPDVLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MAAGQNGHEEWVGSAYLFVESSLDKVVLSDAYAHPQQKVAVYRALQAALAESGGSPDVLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MLKIHRSDPQLIVQLRFCGRQPCGRFLRAYREGALRAALQRSLAAALAQHSVPLQLELRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MLKIHRSDPQLIVQLRFCGRQPCGRFLRAYREGALRAALQRSLAAALAQHSVPLQLELRA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GAERLDALLADEERCLSCILAQQPDRLRDEELAELEDALRNLKCGSGARGGDGEVASAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 GAERLDALLADEERCLSCILAQQPDRLRDEELAELEDALRNLKCGSGARGGDGEVASAPL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QPPVPSLSEVKPPPPPPPAQTFLFQGQPVVNRPLSLKDQQTFARSVGLKWRKVGRSLQRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 QPPVPSLSEVKPPPPPPPAQTFLFQGQPVVNRPLSLKDQQTFARSVGLKWRKVGRSLQRG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 CRALRDPALDSLAYEYEREGLYEQAFQLLRRFVQAEGRRATLQRLVEALEENELTSLAED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 CRALRDPALDSLAYEYEREGLYEQAFQLLRRFVQAEGRRATLQRLVEALEENELTSLAED 250 260 270 280 290 300 310 pF1KE1 LLGLTDPNGGLA :::::::::::: CCDS10 LLGLTDPNGGLA 310 312 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:25:39 2016 done: Mon Nov 7 02:25:40 2016 Total Scan time: 3.060 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]