FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5512, 360 aa 1>>>pF1KE5512 360 - 360 aa - 360 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7882+/-0.000785; mu= 14.8060+/- 0.048 mean_var=81.7823+/-16.606, 0's: 0 Z-trim(109.9): 4 B-trim: 359 in 2/48 Lambda= 0.141822 statistics sampled from 11232 (11234) to 11232 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.345), width: 16 Scan time: 2.750 The best scores are: opt bits E(32554) CCDS10281.1 SNUPN gene_id:10073|Hs108|chr15 ( 360) 2472 515.1 3.6e-146 >>CCDS10281.1 SNUPN gene_id:10073|Hs108|chr15 (360 aa) initn: 2472 init1: 2472 opt: 2472 Z-score: 2737.7 bits: 515.1 E(32554): 3.6e-146 Smith-Waterman score: 2472; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360) 10 20 30 40 50 60 pF1KE5 MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 HARRLAEDDWTGMESEEENKKDDEEMDIDTVKKLPKHYANQLMLSEWLIDVPSDLGQEWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HARRLAEDDWTGMESEEENKKDDEEMDIDTVKKLPKHYANQLMLSEWLIDVPSDLGQEWI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 VVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRNSTAKDYTILDCIYNEVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRNSTAKDYTILDCIYNEVN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 QTYYVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEGLGEKTKLNPFKFVGLKNFPCTPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 QTYYVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEGLGEKTKLNPFKFVGLKNFPCTPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 SLCDVLSMDFPFEVDGLLFYHKQTHYSPGSTPLVGWLRPYMVSDVLGVAVPAGPLTTKPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 SLCDVLSMDFPFEVDGLLFYHKQTHYSPGSTPLVGWLRPYMVSDVLGVAVPAGPLTTKPD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 YAGHQLQQIMEHKKSQKEGMKEKLTHKASENGHYELEHLSTPKLKGSSHSPDHPGCLMEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 YAGHQLQQIMEHKKSQKEGMKEKLTHKASENGHYELEHLSTPKLKGSSHSPDHPGCLMEN 310 320 330 340 350 360 360 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:21:57 2016 done: Tue Nov 8 01:21:58 2016 Total Scan time: 2.750 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]