FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6344, 355 aa 1>>>pF1KE6344 355 - 355 aa - 355 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2949+/-0.000952; mu= 16.3168+/- 0.057 mean_var=64.4766+/-12.955, 0's: 0 Z-trim(104.5): 19 B-trim: 171 in 1/51 Lambda= 0.159725 statistics sampled from 7927 (7932) to 7927 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.244), width: 16 Scan time: 1.770 The best scores are: opt bits E(32554) CCDS2531.1 NDUFA10 gene_id:4705|Hs108|chr2 ( 355) 2387 558.9 2.3e-159 >>CCDS2531.1 NDUFA10 gene_id:4705|Hs108|chr2 (355 aa) initn: 2387 init1: 2387 opt: 2387 Z-score: 2974.7 bits: 558.9 E(32554): 2.3e-159 Smith-Waterman score: 2387; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355) 10 20 30 40 50 60 pF1KE6 MALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTERSRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 MALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTERSRVI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLEKFYDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 TVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLEKFYDD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 PRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 PRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQDIENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 KQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQDIENA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLRLLVQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 YKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLRLLVQD 250 260 270 280 290 300 310 320 330 340 350 pF1KE6 KFEVLNYTSIPIFLPEVTIGAHQTDRVLHQFRELPGRKYSPGYNTEVGDKWIWLK ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 KFEVLNYTSIPIFLPEVTIGAHQTDRVLHQFRELPGRKYSPGYNTEVGDKWIWLK 310 320 330 340 350 355 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:18:24 2016 done: Tue Nov 8 12:18:24 2016 Total Scan time: 1.770 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]