FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4477, 495 aa 1>>>pF1KE4477 495 - 495 aa - 495 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0239+/-0.000803; mu= 14.4660+/- 0.048 mean_var=79.9778+/-15.915, 0's: 0 Z-trim(109.1): 24 B-trim: 562 in 1/49 Lambda= 0.143413 statistics sampled from 10618 (10625) to 10618 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.326), width: 16 Scan time: 3.130 The best scores are: opt bits E(32554) CCDS12691.1 FKRP gene_id:79147|Hs108|chr19 ( 495) 3361 705.0 4.7e-203 >>CCDS12691.1 FKRP gene_id:79147|Hs108|chr19 (495 aa) initn: 3361 init1: 3361 opt: 3361 Z-score: 3759.0 bits: 705.0 E(32554): 4.7e-203 Smith-Waterman score: 3361; 100.0% identity (100.0% similar) in 495 aa overlap (1-495:1-495) 10 20 30 40 50 60 pF1KE4 MRLTRCQAALAAAITLNLLVLFYVSWLQHQPRNSRARGPRRASAAGPRVTVLVREFEAFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MRLTRCQAALAAAITLNLLVLFYVSWLQHQPRNSRARGPRRASAAGPRVTVLVREFEAFD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NAVPELVDSFLQQDPAQPVVVAADTLPYPPLALPRIPNVRLALLQPALDRPAAASRPETY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 NAVPELVDSFLQQDPAQPVVVAADTLPYPPLALPRIPNVRLALLQPALDRPAAASRPETY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPVATANPARCLALNVSLREWTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPVATANPARCLALNVSLREWTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPVGTSLFLQTALRGWAVQLLDLTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 RYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPVGTSLFLQTALRGWAVQLLDLTF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 AAARQPPLATAHARWKAEREGRARRAALLRALGIRLVSWEGGRLEWFGCNKETTRCFGTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 AAARQPPLATAHARWKAEREGRARRAALLRALGIRLVSWEGGRLEWFGCNKETTRCFGTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 VGDTPAYLYEERWTPPCCLRALRETARYVVGVLEAAGVRYWLEGGSLLGAARHGDIIPWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 VGDTPAYLYEERWTPPCCLRALRETARYVVGVLEAAGVRYWLEGGSLLGAARHGDIIPWD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 YDVDLGIYLEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDFFRVQYSESNHLHVDLWPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 YDVDLGIYLEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDFFRVQYSESNHLHVDLWPF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 YPRNGVMTKDTWLDHRQDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFGPGVIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 YPRNGVMTKDTWLDHRQDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFGPGVIEN 430 440 450 460 470 480 490 pF1KE4 PQYPNPALLSLTGSG ::::::::::::::: CCDS12 PQYPNPALLSLTGSG 490 495 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:27:33 2016 done: Sun Nov 6 00:27:33 2016 Total Scan time: 3.130 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]