FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4346, 361 aa 1>>>pF1KE4346 361 - 361 aa - 361 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.1755+/-0.00038; mu= -3.0361+/- 0.024 mean_var=344.3563+/-71.673, 0's: 0 Z-trim(123.7): 4 B-trim: 1533 in 1/60 Lambda= 0.069115 statistics sampled from 44090 (44094) to 44090 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.517), width: 16 Scan time: 7.380 The best scores are: opt bits E(85289) NP_001122388 (OMIM: 608061) mitochondrial import r ( 361) 2439 256.3 7.8e-68 NP_006105 (OMIM: 608061) mitochondrial import rece ( 361) 2439 256.3 7.8e-68 NP_001122389 (OMIM: 608061) mitochondrial import r ( 361) 2439 256.3 7.8e-68 XP_005258468 (OMIM: 608061) PREDICTED: mitochondri ( 335) 2135 226.0 9.9e-59 >>NP_001122388 (OMIM: 608061) mitochondrial import recep (361 aa) initn: 2439 init1: 2439 opt: 2439 Z-score: 1338.8 bits: 256.3 E(85289): 7.8e-68 Smith-Waterman score: 2439; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE4 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI 310 320 330 340 350 360 pF1KE4 G : NP_001 G >>NP_006105 (OMIM: 608061) mitochondrial import receptor (361 aa) initn: 2439 init1: 2439 opt: 2439 Z-score: 1338.8 bits: 256.3 E(85289): 7.8e-68 Smith-Waterman score: 2439; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE4 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI 310 320 330 340 350 360 pF1KE4 G : NP_006 G >>NP_001122389 (OMIM: 608061) mitochondrial import recep (361 aa) initn: 2439 init1: 2439 opt: 2439 Z-score: 1338.8 bits: 256.3 E(85289): 7.8e-68 Smith-Waterman score: 2439; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE4 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI 310 320 330 340 350 360 pF1KE4 G : NP_001 G >>XP_005258468 (OMIM: 608061) PREDICTED: mitochondrial i (335 aa) initn: 2307 init1: 2135 opt: 2135 Z-score: 1175.4 bits: 226.0 E(85289): 9.9e-59 Smith-Waterman score: 2135; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317) 10 20 30 40 50 60 pF1KE4 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSLGAGTSTSRSSERTPGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVKLTVNKGLSNHFQVNHTVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 FGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI ::::::::::::::::. XP_005 FGYQLDLPKANLLFKGAGGQCAATLWASTLPGNTC 310 320 330 361 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 02:10:20 2016 done: Sun Nov 6 02:10:22 2016 Total Scan time: 7.380 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]