FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4407, 421 aa 1>>>pF1KE4407 421 - 421 aa - 421 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8571+/-0.000893; mu= 14.1544+/- 0.053 mean_var=77.5743+/-15.166, 0's: 0 Z-trim(106.8): 17 B-trim: 0 in 0/51 Lambda= 0.145618 statistics sampled from 9213 (9220) to 9213 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.283), width: 16 Scan time: 3.100 The best scores are: opt bits E(32554) CCDS11414.2 CNP gene_id:1267|Hs108|chr17 ( 421) 2803 598.5 3.8e-171 CCDS82123.1 CNP gene_id:1267|Hs108|chr17 ( 401) 2665 569.5 2e-162 >>CCDS11414.2 CNP gene_id:1267|Hs108|chr17 (421 aa) initn: 2803 init1: 2803 opt: 2803 Z-score: 3186.1 bits: 598.5 E(32554): 3.8e-171 Smith-Waterman score: 2803; 100.0% identity (100.0% similar) in 421 aa overlap (1-421:1-421) 10 20 30 40 50 60 pF1KE4 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI 370 380 390 400 410 420 pF1KE4 I : CCDS11 I >>CCDS82123.1 CNP gene_id:1267|Hs108|chr17 (401 aa) initn: 2665 init1: 2665 opt: 2665 Z-score: 3029.7 bits: 569.5 E(32554): 2e-162 Smith-Waterman score: 2665; 100.0% identity (100.0% similar) in 401 aa overlap (21-421:1-401) 10 20 30 40 50 60 pF1KE4 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG :::::::::::::::::::::::::::::::::::::::: CCDS82 MSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG 10 20 30 40 70 80 90 100 110 120 pF1KE4 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE4 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE4 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE4 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE4 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE4 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI 350 360 370 380 390 400 pF1KE4 I : CCDS82 I 421 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Nov 9 12:19:36 2016 done: Wed Nov 9 12:19:37 2016 Total Scan time: 3.100 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]