FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1527, 217 aa 1>>>pF1KE1527 217 - 217 aa - 217 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2366+/-0.000644; mu= 16.6491+/- 0.039 mean_var=93.8177+/-18.253, 0's: 0 Z-trim(113.9): 50 B-trim: 45 in 1/50 Lambda= 0.132413 statistics sampled from 14454 (14504) to 14454 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.446), width: 16 Scan time: 2.240 The best scores are: opt bits E(32554) CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 ( 217) 1523 299.9 8.1e-82 CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 ( 241) 850 171.4 4.4e-43 CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 ( 273) 850 171.4 4.8e-43 CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 ( 388) 850 171.6 6.1e-43 CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 ( 210) 799 161.6 3.4e-40 CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 ( 180) 421 89.3 1.7e-18 CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 ( 198) 421 89.3 1.8e-18 CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 ( 187) 404 86.1 1.6e-17 CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 ( 205) 404 86.1 1.7e-17 CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 ( 302) 404 86.3 2.3e-17 CCDS1377.1 RGS2 gene_id:5997|Hs108|chr1 ( 211) 401 85.6 2.6e-17 CCDS41448.1 RGS21 gene_id:431704|Hs108|chr1 ( 152) 396 84.5 4.1e-17 CCDS1374.1 RGS18 gene_id:64407|Hs108|chr1 ( 235) 398 85.0 4.2e-17 CCDS1376.1 RGS13 gene_id:6003|Hs108|chr1 ( 159) 388 82.9 1.2e-16 CCDS1348.1 RGS16 gene_id:6004|Hs108|chr1 ( 202) 387 82.9 1.6e-16 CCDS35114.1 RGS3 gene_id:5998|Hs108|chr9 ( 311) 385 82.7 2.9e-16 CCDS1375.2 RGS1 gene_id:5996|Hs108|chr1 ( 209) 382 81.9 3.2e-16 CCDS6798.1 RGS3 gene_id:5998|Hs108|chr9 ( 519) 385 82.9 4.1e-16 CCDS65111.1 RGS3 gene_id:5998|Hs108|chr9 ( 591) 385 83.0 4.5e-16 CCDS6797.1 RGS3 gene_id:5998|Hs108|chr9 ( 917) 385 83.1 6.1e-16 CCDS43869.1 RGS3 gene_id:5998|Hs108|chr9 (1198) 385 83.3 7.3e-16 CCDS1244.1 RGS5 gene_id:8490|Hs108|chr1 ( 181) 358 77.3 7e-15 CCDS10403.1 RGS11 gene_id:8786|Hs108|chr16 ( 446) 349 75.9 4.3e-14 CCDS66884.1 RGS11 gene_id:8786|Hs108|chr16 ( 456) 349 76.0 4.4e-14 CCDS42088.1 RGS11 gene_id:8786|Hs108|chr16 ( 467) 349 76.0 4.5e-14 CCDS58041.1 RGS5 gene_id:8490|Hs108|chr1 ( 185) 342 74.2 5.9e-14 CCDS31071.1 RGS7 gene_id:6000|Hs108|chr1 ( 487) 343 74.8 1e-13 CCDS60458.1 RGS7 gene_id:6000|Hs108|chr1 ( 469) 342 74.6 1.1e-13 CCDS60457.1 RGS7 gene_id:6000|Hs108|chr1 ( 424) 341 74.4 1.2e-13 CCDS60459.1 RGS7 gene_id:6000|Hs108|chr1 ( 477) 341 74.5 1.3e-13 CCDS45764.1 RGS9 gene_id:8787|Hs108|chr17 ( 671) 334 73.3 4.2e-13 CCDS42373.1 RGS9 gene_id:8787|Hs108|chr17 ( 674) 334 73.3 4.2e-13 CCDS73655.1 RGS6 gene_id:9628|Hs108|chr14 ( 437) 330 72.3 5.3e-13 CCDS9808.1 RGS6 gene_id:9628|Hs108|chr14 ( 472) 330 72.3 5.6e-13 CCDS55924.1 RGS6 gene_id:9628|Hs108|chr14 ( 490) 330 72.4 5.7e-13 CCDS43405.1 RGS14 gene_id:10636|Hs108|chr5 ( 566) 326 71.7 1.1e-12 CCDS3368.1 RGS12 gene_id:6002|Hs108|chr4 ( 799) 322 71.0 2.3e-12 CCDS3367.1 RGS12 gene_id:6002|Hs108|chr4 (1376) 322 71.3 3.4e-12 CCDS3366.1 RGS12 gene_id:6002|Hs108|chr4 (1447) 322 71.3 3.5e-12 CCDS31294.1 RGS10 gene_id:6001|Hs108|chr10 ( 181) 311 68.3 3.5e-12 CCDS41572.1 RGS10 gene_id:6001|Hs108|chr10 ( 167) 307 67.5 5.7e-12 >>CCDS13555.1 RGS19 gene_id:10287|Hs108|chr20 (217 aa) initn: 1523 init1: 1523 opt: 1523 Z-score: 1582.4 bits: 299.9 E(32554): 8.1e-82 Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 217 aa overlap (1-217:1-217) 10 20 30 40 50 60 pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSRNPCCLCWCCCCSCSWNQERRRAWQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSRNPCCLCWCCCCSCSWNQERRRAWQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKMQEPSAHTFDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKMQEPSAHTFDDA 130 140 150 160 170 180 190 200 210 pF1KE1 QLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA ::::::::::::::::::::::::::::::::::::: CCDS13 QLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA 190 200 210 >>CCDS6156.1 RGS20 gene_id:8601|Hs108|chr8 (241 aa) initn: 831 init1: 688 opt: 850 Z-score: 887.0 bits: 171.4 E(32554): 4.4e-43 Smith-Waterman score: 850; 62.4% identity (78.6% similar) in 210 aa overlap (14-217:38-241) 10 20 30 40 pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL : : : . .. :.: :: : ::. CCDS61 EPAGASSPAGRVDGGLQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF 10 20 30 40 50 60 50 60 70 80 90 pF1KE1 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS ::::::::: ::: .: ::.: . ::. : .:. :::..::::::::: . CCDS61 CWCCCCSCSCLTVRNQEDQRPTIASHELR-ADLPTWEESPAPTLEEVNAWAQSFDKLMVT 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL ::::..:: :::::.::::::::.:::::: :::.....::::.:::::.:::::::::: CCDS61 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE1 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA :::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: :: CCDS61 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA 190 200 210 220 230 240 >>CCDS69482.1 RGS20 gene_id:8601|Hs108|chr8 (273 aa) initn: 831 init1: 688 opt: 850 Z-score: 886.3 bits: 171.4 E(32554): 4.8e-43 Smith-Waterman score: 850; 62.4% identity (78.6% similar) in 210 aa overlap (14-217:70-273) 10 20 30 40 pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL : : : . .. :.: :: : ::. CCDS69 QITENEGDLRAVPDIKQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF 40 50 60 70 80 90 50 60 70 80 90 pF1KE1 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS ::::::::: ::: .: ::.: . ::. : .:. :::..::::::::: . CCDS69 CWCCCCSCSCLTVRNQEDQRPTIASHELR-ADLPTWEESPAPTLEEVNAWAQSFDKLMVT 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL ::::..:: :::::.::::::::.:::::: :::.....::::.:::::.:::::::::: CCDS69 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL 160 170 180 190 200 210 160 170 180 190 200 210 pF1KE1 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA :::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: :: CCDS69 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA 220 230 240 250 260 270 >>CCDS6155.1 RGS20 gene_id:8601|Hs108|chr8 (388 aa) initn: 831 init1: 688 opt: 850 Z-score: 884.4 bits: 171.6 E(32554): 6.1e-43 Smith-Waterman score: 850; 62.4% identity (78.6% similar) in 210 aa overlap (14-217:185-388) 10 20 30 40 pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPAAPSR--NPCCL : : : . .. :.: :: : ::. CCDS61 KPREEDATAGQSSPMPQMGSERMEMRKRQMPAAQDTPGAAPGQ----PGAGSRGSNACCF 160 170 180 190 200 210 50 60 70 80 90 pF1KE1 CWCCCCSCS----WNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHS ::::::::: ::: .: ::.: . ::. : .:. :::..::::::::: . CCDS61 CWCCCCSCSCLTVRNQEDQRPTIASHELR-ADLPTWEESPAPTLEEVNAWAQSFDKLMVT 220 230 240 250 260 100 110 120 130 140 150 pF1KE1 PAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSL ::::..:: :::::.::::::::.:::::: :::.....::::.:::::.:::::::::: CCDS61 PAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPKEVSL 270 280 290 300 310 320 160 170 180 190 200 210 pF1KE1 DSRVREGINKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA :::::: ::..: ::: : ::::::::::::::::::::..: .:. :: :. :..: :: CCDS61 DSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLL-QSLSEKSIEA 330 340 350 360 370 380 >>CCDS5244.1 RGS17 gene_id:26575|Hs108|chr6 (210 aa) initn: 719 init1: 719 opt: 799 Z-score: 835.1 bits: 161.6 E(32554): 3.4e-40 Smith-Waterman score: 803; 56.6% identity (80.5% similar) in 205 aa overlap (25-217:7-210) 10 20 30 40 50 pF1KE1 MPTPHEAEKQITGPEEADRPPSMSSHDTASPA---APSR----NPCCLCWCCCCSCS--- :.. ..:: ::. : ::.::::::::: CCDS52 MRKRQQSQNEGTPAVSQAPGNQRPNNTCCFCWCCCCSCSCLT 10 20 30 40 60 70 80 90 100 pF1KE1 -WNQER-RRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFL :.:: . : . .. .:.. . : : .:. ::: ::.:.:::.:..::::..:: :: CCDS52 VRNEERGENAGRPTHTTKMESIQVLEECQNPTAEEVLSWSQNFDKMMKAPAGRNLFREFL 50 60 70 80 90 100 110 120 130 140 150 160 pF1KE1 RTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKK ::::::::.:::::::.:: : :..:..::::.:::::.:::::::::::::::: ::.. CCDS52 RTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLDSRVREVINRN 110 120 130 140 150 160 170 180 190 200 210 pF1KE1 MQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA . .:. : ..::::::::::::::.::::.: :.... .. . ::::. CCDS52 LLDPNPHMYEDAQLQIYTLMHRDSFPRFLNSQIYKSFV-ESTAGSSSES 170 180 190 200 210 >>CCDS41443.1 RGS8 gene_id:85397|Hs108|chr1 (180 aa) initn: 433 init1: 417 opt: 421 Z-score: 445.7 bits: 89.3 E(32554): 1.7e-18 Smith-Waterman score: 421; 47.4% identity (73.3% similar) in 135 aa overlap (80-214:46-180) 50 60 70 80 90 100 pF1KE1 SWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLR : ::. ::.::: :. : ..:::::. CCDS41 RLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLK 20 30 40 50 60 70 110 120 130 140 150 160 pF1KE1 TEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKM ::.::::. :::::::.: . . ::. :.:..:.. .:.::..: ..::. :.. CCDS41 TEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNL 80 90 100 110 120 130 170 180 190 200 210 pF1KE1 QEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA :::: ::.:: ....::..::::::: : : :: :. . : CCDS41 QEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS 140 150 160 170 180 >>CCDS1349.1 RGS8 gene_id:85397|Hs108|chr1 (198 aa) initn: 433 init1: 417 opt: 421 Z-score: 445.2 bits: 89.3 E(32554): 1.8e-18 Smith-Waterman score: 421; 47.4% identity (73.3% similar) in 135 aa overlap (80-214:64-198) 50 60 70 80 90 100 pF1KE1 SWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLR : ::. ::.::: :. : ..:::::. CCDS13 RLGCLSHKSDSCSDFTAILPDKPNRALKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLK 40 50 60 70 80 90 110 120 130 140 150 160 pF1KE1 TEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREGINKKM ::.::::. :::::::.: . . ::. :.:..:.. .:.::..: ..::. :.. CCDS13 TEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQTREATRKNL 100 110 120 130 140 150 170 180 190 200 210 pF1KE1 QEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA :::: ::.:: ....::..::::::: : : :: :. . : CCDS13 QEPSLTCFDQAQGKVHSLMEKDSYPRFLRSKMYLDLLSQSQRRLS 160 170 180 190 >>CCDS44272.1 RGS4 gene_id:5999|Hs108|chr1 (187 aa) initn: 408 init1: 375 opt: 404 Z-score: 427.9 bits: 86.1 E(32554): 1.6e-17 Smith-Waterman score: 404; 43.7% identity (73.9% similar) in 142 aa overlap (75-216:29-168) 50 60 70 80 90 100 pF1KE1 CCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVF .: : :::..::.:...:. : ..: CCDS44 MKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF 10 20 30 40 50 110 120 130 140 150 160 pF1KE1 RAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG .:::..::::::. ::..::: : . .. ::. ::....:. . :::.::: .:: CCDS44 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 60 70 80 90 100 110 170 180 190 200 210 pF1KE1 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA ...: ::. ::.:: .:..::..::: :::.: : : : .::. ..: CCDS44 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY--LDLVNPSSCGAEKQKGAKSS 120 130 140 150 160 170 CCDS44 ADCASLVPQCA 180 >>CCDS1243.1 RGS4 gene_id:5999|Hs108|chr1 (205 aa) initn: 408 init1: 375 opt: 404 Z-score: 427.4 bits: 86.1 E(32554): 1.7e-17 Smith-Waterman score: 404; 43.7% identity (73.9% similar) in 142 aa overlap (75-216:47-186) 50 60 70 80 90 100 pF1KE1 CCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVF .: : :::..::.:...:. : ..: CCDS12 KDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF 20 30 40 50 60 70 110 120 130 140 150 160 pF1KE1 RAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG .:::..::::::. ::..::: : . .. ::. ::....:. . :::.::: .:: CCDS12 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 80 90 100 110 120 130 170 180 190 200 210 pF1KE1 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA ...: ::. ::.:: .:..::..::: :::.: : : : .::. ..: CCDS12 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY--LDLVNPSSCGAEKQKGAKSS 140 150 160 170 180 190 CCDS12 ADCASLVPQCA 200 >>CCDS44270.1 RGS4 gene_id:5999|Hs108|chr1 (302 aa) initn: 392 init1: 375 opt: 404 Z-score: 425.3 bits: 86.3 E(32554): 2.3e-17 Smith-Waterman score: 404; 43.7% identity (73.9% similar) in 142 aa overlap (75-216:144-283) 50 60 70 80 90 100 pF1KE1 CCCSCSWNQERRRAWQASRESKLQPLPSCEVCATPSPEEVQSWAQSFDKLMHSPAGRSVF .: : :::..::.:...:. : ..: CCDS44 KDMKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAF 120 130 140 150 160 170 110 120 130 140 150 160 pF1KE1 RAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDSRVREG .:::..::::::. ::..::: : . .. ::. ::....:. . :::.::: .:: CCDS44 KAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREE 180 190 200 210 220 230 170 180 190 200 210 pF1KE1 INKKMQEPSAHTFDDAQLQIYTLMHRDSYPRFLSSPTYRALLLQGPSQSSSEA ...: ::. ::.:: .:..::..::: :::.: : : : .::. ..: CCDS44 TSRNMLEPTITCFDEAQKKIFNLMEKDSYRRFLKSRFY--LDLVNPSSCGAEKQKGAKSS 240 250 260 270 280 290 CCDS44 ADCASLVPQCA 300 217 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:51:12 2016 done: Mon Nov 7 02:51:12 2016 Total Scan time: 2.240 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]