FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1452, 249 aa 1>>>pF1KE1452 249 - 249 aa - 249 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.2421+/-0.000809; mu= 6.8000+/- 0.049 mean_var=131.5305+/-25.672, 0's: 0 Z-trim(112.2): 10 B-trim: 0 in 0/55 Lambda= 0.111831 statistics sampled from 13025 (13034) to 13025 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.4), width: 16 Scan time: 2.350 The best scores are: opt bits E(32554) CCDS9612.1 PSME1 gene_id:5720|Hs108|chr14 ( 249) 1634 274.2 6e-74 CCDS61415.1 PSME1 gene_id:5720|Hs108|chr14 ( 233) 1468 247.4 6.5e-66 CCDS41930.1 PSME1 gene_id:5720|Hs108|chr14 ( 250) 1468 247.4 6.9e-66 CCDS45689.1 PSME3 gene_id:10197|Hs108|chr17 ( 254) 679 120.1 1.5e-27 CCDS59290.1 PSME3 gene_id:10197|Hs108|chr17 ( 265) 657 116.5 1.8e-26 CCDS9614.1 PSME2 gene_id:5721|Hs108|chr14 ( 239) 547 98.8 3.6e-21 CCDS82133.1 PSME3 gene_id:10197|Hs108|chr17 ( 193) 498 90.8 7.2e-19 CCDS11442.1 PSME3 gene_id:10197|Hs108|chr17 ( 267) 396 74.4 8.5e-14 >>CCDS9612.1 PSME1 gene_id:5720|Hs108|chr14 (249 aa) initn: 1634 init1: 1634 opt: 1634 Z-score: 1441.1 bits: 274.2 E(32554): 6e-74 Smith-Waterman score: 1634; 100.0% identity (100.0% similar) in 249 aa overlap (1-249:1-249) 10 20 30 40 50 60 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 LDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 IKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 RGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKP 190 200 210 220 230 240 pF1KE1 RGETKGMIY ::::::::: CCDS96 RGETKGMIY >>CCDS61415.1 PSME1 gene_id:5720|Hs108|chr14 (233 aa) initn: 1468 init1: 1468 opt: 1468 Z-score: 1296.8 bits: 247.4 E(32554): 6.5e-66 Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 223 aa overlap (1-223:1-223) 10 20 30 40 50 60 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 IKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKP ::::::::::::::::::::::::::::::::::::::::::: CCDS61 RGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYVRRLCYMTSS 190 200 210 220 230 pF1KE1 RGETKGMIY >>CCDS41930.1 PSME1 gene_id:5720|Hs108|chr14 (250 aa) initn: 1468 init1: 1468 opt: 1468 Z-score: 1296.4 bits: 247.4 E(32554): 6.9e-66 Smith-Waterman score: 1468; 100.0% identity (100.0% similar) in 223 aa overlap (1-223:1-223) 10 20 30 40 50 60 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 IKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKP ::::::::::::::::::::::::::::::::::::::::::: CCDS41 RGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYVRRQGQGRGGQRQLSQA 190 200 210 220 230 240 pF1KE1 RGETKGMIY CCDS41 THSLTLQARG 250 >>CCDS45689.1 PSME3 gene_id:10197|Hs108|chr17 (254 aa) initn: 672 init1: 473 opt: 679 Z-score: 608.3 bits: 120.1 E(32554): 1.5e-27 Smith-Waterman score: 679; 40.9% identity (74.2% similar) in 252 aa overlap (2-249:3-254) 10 20 30 40 50 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKA ..:.:. :.. ::: ::: . ...:.:....::::. :::.::::: :: .:..... CCDS45 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 PLDIPVPDPVKEKEKEE--RKKQQEKEDKDEKKKGEDEDKG--PPCGPVNCNEKIVVLLQ ...:::::. .... .:. :: ... . : : : .. :...: ... CCDS45 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 RLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQIS ..::::. .::. : : :.:: ::::::::::::..::.. . ..... .. ::: CCDS45 KVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQIS 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 KYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFE .:. :. :.: :: ::: :::. : :.:: :: ..::.. :.:: :..:.:.::::.: CCDS45 RYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIE 190 200 210 220 230 240 240 pF1KE1 KLKKPRGETKGMIY :.:.::. . .: CCDS45 KIKRPRSSNAETLY 250 >>CCDS59290.1 PSME3 gene_id:10197|Hs108|chr17 (265 aa) initn: 672 init1: 473 opt: 657 Z-score: 588.8 bits: 116.5 E(32554): 1.8e-26 Smith-Waterman score: 657; 41.5% identity (73.9% similar) in 241 aa overlap (13-249:25-265) 10 20 30 40 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPA ::: ::: . ...:.:....::::. :::.::::: CCDS59 MEKWILKKIKYLQSGGLSASYYSYKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPI 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 LNEANLSNLKAPLDIPVPDPVKEKEKEE--RKKQQEKEDKDEKKKGEDEDKG--PPCGPV :: .:..... ...:::::. .... .:. :: ... . : : : . CCDS59 LNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGML 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 NCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLH . :...: .....::::. .::. : : :.:: ::::::::::::..::.. . ... CCDS59 KSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVE 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE1 TKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYA .. .. :::.:. :. :.: :: ::: :::. : :.:: :: ..::.. :.:: :. CCDS59 SEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYV 190 200 210 220 230 240 230 240 pF1KE1 VLYDIILKNFEKLKKPRGETKGMIY .:.:.::::.::.:.::. . .: CCDS59 TLHDMILKNIEKIKRPRSSNAETLY 250 260 >>CCDS9614.1 PSME2 gene_id:5721|Hs108|chr14 (239 aa) initn: 763 init1: 536 opt: 547 Z-score: 493.6 bits: 98.8 E(32554): 3.6e-21 Smith-Waterman score: 736; 48.0% identity (74.0% similar) in 246 aa overlap (4-249:7-239) 10 20 30 40 50 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNL .:.. ::. .:.:::..: ..:..: ..:.:: :. .:.: .:: :.:..: CCDS96 MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRL .::::::.::: . .. : ::..:: . :: . :::.. :: . CCDS96 RAPLDIPIPDPPPKDDEMETDKQEKKEVHK-------------CGFLPGNEKVLSLLALV 70 80 90 100 120 130 140 150 160 170 pF1KE1 KPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKY :::. . :. :: ::.: ::.:::::.::::.::::.: .....::.:.:.: :::: CCDS96 KPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKY 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 FSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKL ::::::::.::.:. :: ::: :::: ::: : ..: ::...: :: :: :: .:.::. CCDS96 FSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSNLEKI 170 180 190 200 210 220 240 pF1KE1 KKPRGETKGMIY .:.:: : .: CCDS96 VNPKGEEKPSMY 230 >>CCDS82133.1 PSME3 gene_id:10197|Hs108|chr17 (193 aa) initn: 506 init1: 473 opt: 498 Z-score: 452.2 bits: 90.8 E(32554): 7.2e-19 Smith-Waterman score: 498; 39.9% identity (71.5% similar) in 193 aa overlap (61-249:1-193) 40 50 60 70 80 pF1KE1 SYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEE--RKKQQEKEDKDE ...:::::. .... .:. :: CCDS82 MNLPVPDPILLTNSHDGLDGPTYKKRRLDE 10 20 30 90 100 110 120 130 140 pF1KE1 KKKGEDEDKG--PPCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGN ... . : : : .. :...: .....::::. .::. : : :.:: :::::::: CCDS82 CEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGN 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE1 NFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDE ::::..::.. . ..... .. :::.:. :. :.: :: ::: :::. : :.:: CCDS82 NFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDE 100 110 120 130 140 150 210 220 230 240 pF1KE1 AEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKPRGETKGMIY :: ..::.. :.:: :..:.:.::::.::.:.::. . .: CCDS82 KEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY 160 170 180 190 >>CCDS11442.1 PSME3 gene_id:10197|Hs108|chr17 (267 aa) initn: 644 init1: 392 opt: 396 Z-score: 361.2 bits: 74.4 E(32554): 8.5e-14 Smith-Waterman score: 643; 38.9% identity (70.6% similar) in 265 aa overlap (2-249:3-267) 10 20 30 40 50 pF1KE1 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKA ..:.:. :.. ::: ::: . ...:.:....::::. :::.::::: :: .:..... CCDS11 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 PLDIPVPDPVKEKEKEE--RKKQQEKEDKDEKKKGEDEDKG--PPCGPVNCNEKIVVLLQ ...:::::. .... .:. :: ... . : : : .. :...: ... CCDS11 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE 70 80 90 100 110 120 120 130 140 150 160 pF1KE1 RLKPEIKDVIEQLNL-------------VTTWLQLQIPRIEDGNNFGVAVQEKVFELMTS ..::::. .::. : : :.:: ::::::::::::..::.. . . CCDS11 KVKPEIRLLIEKCNTPSGKGPHICFDLQVKMWVQLLIPRIEDGNNFGVSIQEETVAELRT 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE1 LHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNA .... .. :::.:. :. :.: :: ::: :::. : :.:: :: ..::.. :.:: CCDS11 VESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQ 190 200 210 220 230 240 230 240 pF1KE1 YAVLYDIILKNFEKLKKPRGETKGMIY :..:.:.::::.::.:.::. . .: CCDS11 YVTLHDMILKNIEKIKRPRSSNAETLY 250 260 249 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:06:19 2016 done: Mon Nov 7 03:06:20 2016 Total Scan time: 2.350 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]