FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5617, 546 aa 1>>>pF1KE5617 546 - 546 aa - 546 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.1952+/-0.00107; mu= -2.8122+/- 0.065 mean_var=311.2195+/-61.999, 0's: 0 Z-trim(113.0): 38 B-trim: 0 in 0/51 Lambda= 0.072701 statistics sampled from 13628 (13654) to 13628 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.419), width: 16 Scan time: 3.520 The best scores are: opt bits E(32554) CCDS1752.1 PPM1G gene_id:5496|Hs108|chr2 ( 546) 3621 393.6 3.1e-109 >>CCDS1752.1 PPM1G gene_id:5496|Hs108|chr2 (546 aa) initn: 3621 init1: 3621 opt: 3621 Z-score: 2074.5 bits: 393.6 E(32554): 3.1e-109 Smith-Waterman score: 3621; 100.0% identity (100.0% similar) in 546 aa overlap (1-546:1-546) 10 20 30 40 50 60 pF1KE5 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK 490 500 510 520 530 540 pF1KE5 KKAKRD :::::: CCDS17 KKAKRD 546 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:11:56 2016 done: Tue Nov 8 05:11:56 2016 Total Scan time: 3.520 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]